Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
CCDC66A2RUB6 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
CCDC66A2RUB6 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC23.8■■□□□ 1.4
CCDC66A2RUB6 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
CCDC66A2RUB6 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
CCDC66A2RUB6 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
CCDC66A2RUB6 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
CCDC66A2RUB6 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CCDC66A2RUB6 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CCDC66A2RUB6 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CCDC66A2RUB6 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
CCDC66A2RUB6 H19-210ENST00000439725 1929 ntTSL 2 BASIC23.79■■□□□ 1.4
CCDC66A2RUB6 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC23.79■■□□□ 1.4
CCDC66A2RUB6 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC23.79■■□□□ 1.4
CCDC66A2RUB6 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
CCDC66A2RUB6 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC23.79■■□□□ 1.4
CCDC66A2RUB6 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CCDC66A2RUB6 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC23.79■■□□□ 1.4
CCDC66A2RUB6 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
CCDC66A2RUB6 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC23.79■■□□□ 1.4
CCDC66A2RUB6 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CCDC66A2RUB6 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CCDC66A2RUB6 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC23.79■■□□□ 1.4
CCDC66A2RUB6 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CCDC66A2RUB6 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC23.78■■□□□ 1.4
CCDC66A2RUB6 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CCDC66A2RUB6 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC23.78■■□□□ 1.4
CCDC66A2RUB6 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CCDC66A2RUB6 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
CCDC66A2RUB6 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
CCDC66A2RUB6 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
CCDC66A2RUB6 LBH-205ENST00000407930 756 ntTSL 2 BASIC23.78■■□□□ 1.4
CCDC66A2RUB6 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC23.78■■□□□ 1.4
CCDC66A2RUB6 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC23.78■■□□□ 1.4
CCDC66A2RUB6 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC23.78■■□□□ 1.4
CCDC66A2RUB6 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CCDC66A2RUB6 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
CCDC66A2RUB6 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CCDC66A2RUB6 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC23.78■■□□□ 1.4
CCDC66A2RUB6 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC23.78■■□□□ 1.4
CCDC66A2RUB6 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
CCDC66A2RUB6 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CCDC66A2RUB6 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
CCDC66A2RUB6 IDNK-201ENST00000376417 511 ntTSL 5 BASIC23.77■■□□□ 1.4
CCDC66A2RUB6 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CCDC66A2RUB6 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC23.77■■□□□ 1.4
CCDC66A2RUB6 GUSBP5-202ENST00000510805 1989 ntBASIC23.77■■□□□ 1.4
CCDC66A2RUB6 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CCDC66A2RUB6 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
CCDC66A2RUB6 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC23.77■■□□□ 1.4
CCDC66A2RUB6 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CCDC66A2RUB6 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
CCDC66A2RUB6 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CCDC66A2RUB6 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CCDC66A2RUB6 ECEL1P1-201ENST00000373592 1742 ntBASIC23.76■■□□□ 1.39
CCDC66A2RUB6 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
CCDC66A2RUB6 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC23.76■■□□□ 1.39
CCDC66A2RUB6 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC23.76■■□□□ 1.39
CCDC66A2RUB6 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CCDC66A2RUB6 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC23.76■■□□□ 1.39
CCDC66A2RUB6 AC120024.1-201ENST00000562672 995 ntBASIC23.76■■□□□ 1.39
CCDC66A2RUB6 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
CCDC66A2RUB6 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CCDC66A2RUB6 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CCDC66A2RUB6 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CCDC66A2RUB6 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CCDC66A2RUB6 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CCDC66A2RUB6 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC23.75■■□□□ 1.39
CCDC66A2RUB6 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
CCDC66A2RUB6 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CCDC66A2RUB6 LSR-203ENST00000360798 1963 ntTSL 2 BASIC23.75■■□□□ 1.39
CCDC66A2RUB6 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
CCDC66A2RUB6 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CCDC66A2RUB6 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC23.75■■□□□ 1.39
CCDC66A2RUB6 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC23.75■■□□□ 1.39
CCDC66A2RUB6 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC23.75■■□□□ 1.39
CCDC66A2RUB6 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CCDC66A2RUB6 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
CCDC66A2RUB6 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC23.74■■□□□ 1.39
CCDC66A2RUB6 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC23.74■■□□□ 1.39
CCDC66A2RUB6 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC23.74■■□□□ 1.39
CCDC66A2RUB6 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
CCDC66A2RUB6 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC23.74■■□□□ 1.39
CCDC66A2RUB6 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC23.74■■□□□ 1.39
CCDC66A2RUB6 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC23.74■■□□□ 1.39
CCDC66A2RUB6 AC074183.2-201ENST00000623112 922 ntBASIC23.74■■□□□ 1.39
CCDC66A2RUB6 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
CCDC66A2RUB6 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC23.74■■□□□ 1.39
CCDC66A2RUB6 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC23.74■■□□□ 1.39
CCDC66A2RUB6 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
CCDC66A2RUB6 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CCDC66A2RUB6 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC23.73■■□□□ 1.39
CCDC66A2RUB6 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CCDC66A2RUB6 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC23.73■■□□□ 1.39
CCDC66A2RUB6 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC23.72■■□□□ 1.39
CCDC66A2RUB6 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC23.72■■□□□ 1.39
CCDC66A2RUB6 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC23.72■■□□□ 1.39
CCDC66A2RUB6 KRT18P24-201ENST00000344739 1156 ntBASIC23.72■■□□□ 1.39
CCDC66A2RUB6 BHLHE23-202ENST00000612929 1109 ntBASIC23.72■■□□□ 1.39
CCDC66A2RUB6 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms