Protein–RNA interactions for Protein: A0A576

TCRBV9S1A1T, T-cell receptor beta variable 3-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV9S1A1TA0A576 KRT8P33-201ENST00000508125 1423 ntBASIC22.35■■□□□ 1.17
TCRBV9S1A1TA0A576 AC137630.3-201ENST00000607245 391 ntBASIC22.35■■□□□ 1.17
TCRBV9S1A1TA0A576 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC22.35■■□□□ 1.17
TCRBV9S1A1TA0A576 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
TCRBV9S1A1TA0A576 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC22.35■■□□□ 1.17
TCRBV9S1A1TA0A576 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC22.35■■□□□ 1.17
TCRBV9S1A1TA0A576 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC22.35■■□□□ 1.17
TCRBV9S1A1TA0A576 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC22.34■■□□□ 1.17
TCRBV9S1A1TA0A576 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
TCRBV9S1A1TA0A576 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC22.34■■□□□ 1.17
TCRBV9S1A1TA0A576 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
TCRBV9S1A1TA0A576 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC22.34■■□□□ 1.17
TCRBV9S1A1TA0A576 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
TCRBV9S1A1TA0A576 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC22.34■■□□□ 1.17
TCRBV9S1A1TA0A576 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
TCRBV9S1A1TA0A576 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC22.33■■□□□ 1.17
TCRBV9S1A1TA0A576 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC22.33■■□□□ 1.17
TCRBV9S1A1TA0A576 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
TCRBV9S1A1TA0A576 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC22.32■■□□□ 1.16
TCRBV9S1A1TA0A576 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
TCRBV9S1A1TA0A576 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
TCRBV9S1A1TA0A576 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC22.32■■□□□ 1.16
TCRBV9S1A1TA0A576 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
TCRBV9S1A1TA0A576 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC22.32■■□□□ 1.16
TCRBV9S1A1TA0A576 YBX1P4-201ENST00000392794 808 ntBASIC22.32■■□□□ 1.16
TCRBV9S1A1TA0A576 TK2-216ENST00000564917 1156 ntTSL 3 BASIC22.32■■□□□ 1.16
TCRBV9S1A1TA0A576 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC22.32■■□□□ 1.16
TCRBV9S1A1TA0A576 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC22.32■■□□□ 1.16
TCRBV9S1A1TA0A576 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
TCRBV9S1A1TA0A576 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC22.31■■□□□ 1.16
TCRBV9S1A1TA0A576 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC22.31■■□□□ 1.16
TCRBV9S1A1TA0A576 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC22.31■■□□□ 1.16
TCRBV9S1A1TA0A576 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC22.31■■□□□ 1.16
TCRBV9S1A1TA0A576 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC22.31■■□□□ 1.16
TCRBV9S1A1TA0A576 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC22.31■■□□□ 1.16
TCRBV9S1A1TA0A576 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
TCRBV9S1A1TA0A576 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC22.31■■□□□ 1.16
TCRBV9S1A1TA0A576 LINC01529-204ENST00000636474 1715 ntBASIC22.31■■□□□ 1.16
TCRBV9S1A1TA0A576 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
TCRBV9S1A1TA0A576 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
TCRBV9S1A1TA0A576 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
TCRBV9S1A1TA0A576 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
TCRBV9S1A1TA0A576 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC22.3■■□□□ 1.16
TCRBV9S1A1TA0A576 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC22.3■■□□□ 1.16
TCRBV9S1A1TA0A576 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC22.3■■□□□ 1.16
TCRBV9S1A1TA0A576 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
TCRBV9S1A1TA0A576 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
TCRBV9S1A1TA0A576 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC22.29■■□□□ 1.16
TCRBV9S1A1TA0A576 EFS-203ENST00000429593 2610 ntTSL 2 BASIC22.29■■□□□ 1.16
TCRBV9S1A1TA0A576 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
TCRBV9S1A1TA0A576 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC22.29■■□□□ 1.16
TCRBV9S1A1TA0A576 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC22.29■■□□□ 1.16
TCRBV9S1A1TA0A576 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC22.29■■□□□ 1.16
TCRBV9S1A1TA0A576 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
TCRBV9S1A1TA0A576 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC22.29■■□□□ 1.16
TCRBV9S1A1TA0A576 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
TCRBV9S1A1TA0A576 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC22.29■■□□□ 1.16
TCRBV9S1A1TA0A576 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
TCRBV9S1A1TA0A576 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
TCRBV9S1A1TA0A576 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
TCRBV9S1A1TA0A576 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
TCRBV9S1A1TA0A576 MIR6722-201ENST00000617286 78 ntBASIC22.28■■□□□ 1.16
TCRBV9S1A1TA0A576 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
TCRBV9S1A1TA0A576 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
TCRBV9S1A1TA0A576 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC22.28■■□□□ 1.16
TCRBV9S1A1TA0A576 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
TCRBV9S1A1TA0A576 AC005703.6-201ENST00000623265 1329 ntBASIC22.28■■□□□ 1.16
TCRBV9S1A1TA0A576 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
TCRBV9S1A1TA0A576 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
TCRBV9S1A1TA0A576 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC22.27■■□□□ 1.16
TCRBV9S1A1TA0A576 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
TCRBV9S1A1TA0A576 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.16
TCRBV9S1A1TA0A576 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
TCRBV9S1A1TA0A576 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.16
TCRBV9S1A1TA0A576 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC22.27■■□□□ 1.16
TCRBV9S1A1TA0A576 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC22.27■■□□□ 1.16
TCRBV9S1A1TA0A576 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC22.27■■□□□ 1.16
TCRBV9S1A1TA0A576 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC22.27■■□□□ 1.16
TCRBV9S1A1TA0A576 CLTA-210ENST00000540080 989 ntTSL 2 BASIC22.27■■□□□ 1.16
TCRBV9S1A1TA0A576 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC22.27■■□□□ 1.16
TCRBV9S1A1TA0A576 AL031848.2-201ENST00000607670 837 ntBASIC22.27■■□□□ 1.16
TCRBV9S1A1TA0A576 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
TCRBV9S1A1TA0A576 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
TCRBV9S1A1TA0A576 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.15
TCRBV9S1A1TA0A576 FP325331.1-202ENST00000623531 1380 ntBASIC22.26■■□□□ 1.15
TCRBV9S1A1TA0A576 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC22.26■■□□□ 1.15
TCRBV9S1A1TA0A576 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC22.26■■□□□ 1.15
TCRBV9S1A1TA0A576 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC22.26■■□□□ 1.15
TCRBV9S1A1TA0A576 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC22.26■■□□□ 1.15
TCRBV9S1A1TA0A576 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
TCRBV9S1A1TA0A576 BID-212ENST00000614949 1988 ntTSL 5 BASIC22.26■■□□□ 1.15
TCRBV9S1A1TA0A576 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
TCRBV9S1A1TA0A576 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
TCRBV9S1A1TA0A576 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC22.26■■□□□ 1.15
TCRBV9S1A1TA0A576 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
TCRBV9S1A1TA0A576 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC22.25■■□□□ 1.15
TCRBV9S1A1TA0A576 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC22.25■■□□□ 1.15
TCRBV9S1A1TA0A576 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
TCRBV9S1A1TA0A576 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
TCRBV9S1A1TA0A576 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 80.6 ms