Protein–RNA interactions for Protein: A0A0B4J276

TRAV25, T-cell receptor alpha variable 25 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV25A0A0B4J276 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRAV25A0A0B4J276 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TRAV25A0A0B4J276 MIR638-201ENST00000385237 100 ntBASIC16.64■□□□□ 0.25
TRAV25A0A0B4J276 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TRAV25A0A0B4J276 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TRAV25A0A0B4J276 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TRAV25A0A0B4J276 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC16.64■□□□□ 0.25
TRAV25A0A0B4J276 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC16.64■□□□□ 0.25
TRAV25A0A0B4J276 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.25
TRAV25A0A0B4J276 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRAV25A0A0B4J276 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC16.64■□□□□ 0.25
TRAV25A0A0B4J276 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRAV25A0A0B4J276 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
TRAV25A0A0B4J276 DUSP8P3-201ENST00000399571 1760 ntBASIC16.64■□□□□ 0.25
TRAV25A0A0B4J276 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
TRAV25A0A0B4J276 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC16.64■□□□□ 0.25
TRAV25A0A0B4J276 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC16.63■□□□□ 0.25
TRAV25A0A0B4J276 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC16.63■□□□□ 0.25
TRAV25A0A0B4J276 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TRAV25A0A0B4J276 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TRAV25A0A0B4J276 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRAV25A0A0B4J276 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC16.63■□□□□ 0.25
TRAV25A0A0B4J276 AC005837.3-201ENST00000612163 286 ntBASIC16.63■□□□□ 0.25
TRAV25A0A0B4J276 GRAMD4P4-201ENST00000613563 1115 ntBASIC16.63■□□□□ 0.25
TRAV25A0A0B4J276 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC16.63■□□□□ 0.25
TRAV25A0A0B4J276 AC068587.7-201ENST00000641602 218 ntBASIC16.63■□□□□ 0.25
TRAV25A0A0B4J276 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRAV25A0A0B4J276 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRAV25A0A0B4J276 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC16.63■□□□□ 0.25
TRAV25A0A0B4J276 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRAV25A0A0B4J276 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TRAV25A0A0B4J276 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRAV25A0A0B4J276 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRAV25A0A0B4J276 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC16.62■□□□□ 0.25
TRAV25A0A0B4J276 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRAV25A0A0B4J276 SNX3-202ENST00000349379 890 ntTSL 2 BASIC16.62■□□□□ 0.25
TRAV25A0A0B4J276 AC027682.1-201ENST00000562846 899 ntBASIC16.62■□□□□ 0.25
TRAV25A0A0B4J276 AC233992.3-201ENST00000607491 485 ntBASIC16.62■□□□□ 0.25
TRAV25A0A0B4J276 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TRAV25A0A0B4J276 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC16.62■□□□□ 0.25
TRAV25A0A0B4J276 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRAV25A0A0B4J276 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
TRAV25A0A0B4J276 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRAV25A0A0B4J276 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRAV25A0A0B4J276 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TRAV25A0A0B4J276 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC16.61■□□□□ 0.25
TRAV25A0A0B4J276 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRAV25A0A0B4J276 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRAV25A0A0B4J276 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRAV25A0A0B4J276 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRAV25A0A0B4J276 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
TRAV25A0A0B4J276 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC16.61■□□□□ 0.25
TRAV25A0A0B4J276 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
TRAV25A0A0B4J276 AC142381.2-201ENST00000566120 298 ntBASIC16.61■□□□□ 0.25
TRAV25A0A0B4J276 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC16.61■□□□□ 0.25
TRAV25A0A0B4J276 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
TRAV25A0A0B4J276 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC16.61■□□□□ 0.25
TRAV25A0A0B4J276 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TRAV25A0A0B4J276 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
TRAV25A0A0B4J276 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRAV25A0A0B4J276 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRAV25A0A0B4J276 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TRAV25A0A0B4J276 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC16.6■□□□□ 0.25
TRAV25A0A0B4J276 AC091305.1-201ENST00000479476 895 ntBASIC16.6■□□□□ 0.25
TRAV25A0A0B4J276 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TRAV25A0A0B4J276 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC16.6■□□□□ 0.25
TRAV25A0A0B4J276 MPST-208ENST00000628507 698 ntTSL 5 BASIC16.6■□□□□ 0.25
TRAV25A0A0B4J276 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TRAV25A0A0B4J276 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRAV25A0A0B4J276 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRAV25A0A0B4J276 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TRAV25A0A0B4J276 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRAV25A0A0B4J276 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC16.6■□□□□ 0.25
TRAV25A0A0B4J276 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
TRAV25A0A0B4J276 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC16.59■□□□□ 0.25
TRAV25A0A0B4J276 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
TRAV25A0A0B4J276 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
TRAV25A0A0B4J276 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRAV25A0A0B4J276 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC16.59■□□□□ 0.25
TRAV25A0A0B4J276 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRAV25A0A0B4J276 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TRAV25A0A0B4J276 SUDS3P1-201ENST00000505831 966 ntBASIC16.59■□□□□ 0.25
TRAV25A0A0B4J276 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC16.59■□□□□ 0.25
TRAV25A0A0B4J276 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC16.59■□□□□ 0.25
TRAV25A0A0B4J276 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRAV25A0A0B4J276 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TRAV25A0A0B4J276 RASA4CP-201ENST00000424092 1398 ntBASIC16.59■□□□□ 0.25
TRAV25A0A0B4J276 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
TRAV25A0A0B4J276 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC16.59■□□□□ 0.25
TRAV25A0A0B4J276 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRAV25A0A0B4J276 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC16.59■□□□□ 0.25
TRAV25A0A0B4J276 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
TRAV25A0A0B4J276 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
TRAV25A0A0B4J276 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRAV25A0A0B4J276 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TRAV25A0A0B4J276 MIR939-201ENST00000401314 82 ntBASIC16.58■□□□□ 0.24
TRAV25A0A0B4J276 AP001330.3-201ENST00000520123 633 ntBASIC16.58■□□□□ 0.24
TRAV25A0A0B4J276 AP005435.1-201ENST00000529293 1178 ntBASIC16.58■□□□□ 0.24
TRAV25A0A0B4J276 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC16.58■□□□□ 0.24
TRAV25A0A0B4J276 AL031432.3-201ENST00000607698 485 ntBASIC16.58■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 15.4 ms