Protein–RNA interactions for Protein: A0A0B4J1Z2

IGKV1D-43, Immunoglobulin kappa variable 1D-43, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV1D-43A0A0B4J1Z2 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
IGKV1D-43A0A0B4J1Z2 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
IGKV1D-43A0A0B4J1Z2 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
IGKV1D-43A0A0B4J1Z2 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC19.61■□□□□ 0.73
IGKV1D-43A0A0B4J1Z2 QDPR-206ENST00000508623 601 ntTSL 3 BASIC19.61■□□□□ 0.73
IGKV1D-43A0A0B4J1Z2 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC19.61■□□□□ 0.73
IGKV1D-43A0A0B4J1Z2 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
IGKV1D-43A0A0B4J1Z2 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
IGKV1D-43A0A0B4J1Z2 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC19.61■□□□□ 0.73
IGKV1D-43A0A0B4J1Z2 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC19.61■□□□□ 0.73
IGKV1D-43A0A0B4J1Z2 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
IGKV1D-43A0A0B4J1Z2 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
IGKV1D-43A0A0B4J1Z2 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
IGKV1D-43A0A0B4J1Z2 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
IGKV1D-43A0A0B4J1Z2 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC19.6■□□□□ 0.73
IGKV1D-43A0A0B4J1Z2 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
IGKV1D-43A0A0B4J1Z2 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC19.6■□□□□ 0.73
IGKV1D-43A0A0B4J1Z2 AL356740.2-201ENST00000601559 647 ntBASIC19.6■□□□□ 0.73
IGKV1D-43A0A0B4J1Z2 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
IGKV1D-43A0A0B4J1Z2 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
IGKV1D-43A0A0B4J1Z2 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
IGKV1D-43A0A0B4J1Z2 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
IGKV1D-43A0A0B4J1Z2 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
IGKV1D-43A0A0B4J1Z2 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
IGKV1D-43A0A0B4J1Z2 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
IGKV1D-43A0A0B4J1Z2 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
IGKV1D-43A0A0B4J1Z2 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC19.59■□□□□ 0.73
IGKV1D-43A0A0B4J1Z2 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC19.59■□□□□ 0.73
IGKV1D-43A0A0B4J1Z2 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
IGKV1D-43A0A0B4J1Z2 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
IGKV1D-43A0A0B4J1Z2 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC19.59■□□□□ 0.73
IGKV1D-43A0A0B4J1Z2 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC19.59■□□□□ 0.73
IGKV1D-43A0A0B4J1Z2 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC19.59■□□□□ 0.73
IGKV1D-43A0A0B4J1Z2 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC19.59■□□□□ 0.73
IGKV1D-43A0A0B4J1Z2 AC087742.1-201ENST00000575880 1738 ntBASIC19.59■□□□□ 0.73
IGKV1D-43A0A0B4J1Z2 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
IGKV1D-43A0A0B4J1Z2 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
IGKV1D-43A0A0B4J1Z2 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
IGKV1D-43A0A0B4J1Z2 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC19.58■□□□□ 0.73
IGKV1D-43A0A0B4J1Z2 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
IGKV1D-43A0A0B4J1Z2 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
IGKV1D-43A0A0B4J1Z2 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
IGKV1D-43A0A0B4J1Z2 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
IGKV1D-43A0A0B4J1Z2 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC19.58■□□□□ 0.72
IGKV1D-43A0A0B4J1Z2 AL512631.2-201ENST00000604634 923 ntBASIC19.58■□□□□ 0.72
IGKV1D-43A0A0B4J1Z2 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
IGKV1D-43A0A0B4J1Z2 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
IGKV1D-43A0A0B4J1Z2 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
IGKV1D-43A0A0B4J1Z2 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
IGKV1D-43A0A0B4J1Z2 AC004687.1-201ENST00000579003 1625 ntBASIC19.58■□□□□ 0.72
IGKV1D-43A0A0B4J1Z2 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC19.57■□□□□ 0.72
IGKV1D-43A0A0B4J1Z2 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
IGKV1D-43A0A0B4J1Z2 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
IGKV1D-43A0A0B4J1Z2 AC079834.2-201ENST00000609776 1949 ntBASIC19.57■□□□□ 0.72
IGKV1D-43A0A0B4J1Z2 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
IGKV1D-43A0A0B4J1Z2 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
IGKV1D-43A0A0B4J1Z2 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
IGKV1D-43A0A0B4J1Z2 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
IGKV1D-43A0A0B4J1Z2 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
IGKV1D-43A0A0B4J1Z2 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
IGKV1D-43A0A0B4J1Z2 AC006455.2-201ENST00000429931 906 ntBASIC19.57■□□□□ 0.72
IGKV1D-43A0A0B4J1Z2 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC19.57■□□□□ 0.72
IGKV1D-43A0A0B4J1Z2 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC19.57■□□□□ 0.72
IGKV1D-43A0A0B4J1Z2 AC009086.3-201ENST00000623486 1008 ntBASIC19.57■□□□□ 0.72
IGKV1D-43A0A0B4J1Z2 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC19.57■□□□□ 0.72
IGKV1D-43A0A0B4J1Z2 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC19.57■□□□□ 0.72
IGKV1D-43A0A0B4J1Z2 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
IGKV1D-43A0A0B4J1Z2 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
IGKV1D-43A0A0B4J1Z2 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
IGKV1D-43A0A0B4J1Z2 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
IGKV1D-43A0A0B4J1Z2 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
IGKV1D-43A0A0B4J1Z2 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
IGKV1D-43A0A0B4J1Z2 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC19.56■□□□□ 0.72
IGKV1D-43A0A0B4J1Z2 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
IGKV1D-43A0A0B4J1Z2 ESRRAP2-201ENST00000418437 1549 ntBASIC19.56■□□□□ 0.72
IGKV1D-43A0A0B4J1Z2 GTSE1-AS1-202ENST00000623117 1518 ntBASIC19.56■□□□□ 0.72
IGKV1D-43A0A0B4J1Z2 STK25-234ENST00000535007 2459 ntTSL 2 BASIC19.56■□□□□ 0.72
IGKV1D-43A0A0B4J1Z2 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
IGKV1D-43A0A0B4J1Z2 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
IGKV1D-43A0A0B4J1Z2 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
IGKV1D-43A0A0B4J1Z2 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
IGKV1D-43A0A0B4J1Z2 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
IGKV1D-43A0A0B4J1Z2 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
IGKV1D-43A0A0B4J1Z2 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
IGKV1D-43A0A0B4J1Z2 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
IGKV1D-43A0A0B4J1Z2 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
IGKV1D-43A0A0B4J1Z2 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
IGKV1D-43A0A0B4J1Z2 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
IGKV1D-43A0A0B4J1Z2 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC19.55■□□□□ 0.72
IGKV1D-43A0A0B4J1Z2 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC19.55■□□□□ 0.72
IGKV1D-43A0A0B4J1Z2 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC19.54■□□□□ 0.72
IGKV1D-43A0A0B4J1Z2 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
IGKV1D-43A0A0B4J1Z2 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
IGKV1D-43A0A0B4J1Z2 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
IGKV1D-43A0A0B4J1Z2 LSR-203ENST00000360798 1963 ntTSL 2 BASIC19.54■□□□□ 0.72
IGKV1D-43A0A0B4J1Z2 SRR-208ENST00000576848 588 ntTSL 4 BASIC19.54■□□□□ 0.72
IGKV1D-43A0A0B4J1Z2 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
IGKV1D-43A0A0B4J1Z2 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
IGKV1D-43A0A0B4J1Z2 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
IGKV1D-43A0A0B4J1Z2 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms