Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC10.2□□□□□ -0.78
HLA-DRB4X5D2U9 RN7SL769P-201ENST00000469386 295 ntBASIC10.2□□□□□ -0.78
HLA-DRB4X5D2U9 PLEKHG3-203ENST00000471182 3106 ntTSL 5 BASIC10.2□□□□□ -0.78
HLA-DRB4X5D2U9 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC10.2□□□□□ -0.78
HLA-DRB4X5D2U9 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
HLA-DRB4X5D2U9 PRSS3P1-201ENST00000503996 742 ntBASIC10.2□□□□□ -0.78
HLA-DRB4X5D2U9 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC10.2□□□□□ -0.78
HLA-DRB4X5D2U9 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC10.2□□□□□ -0.78
HLA-DRB4X5D2U9 CPEB4-208ENST00000520867 2607 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
HLA-DRB4X5D2U9 RMDN1-218ENST00000523911 950 ntTSL 2 BASIC10.2□□□□□ -0.78
HLA-DRB4X5D2U9 IGHV3OR16-16-201ENST00000563644 343 ntBASIC10.2□□□□□ -0.78
HLA-DRB4X5D2U9 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC10.2□□□□□ -0.78
HLA-DRB4X5D2U9 MT3-203ENST00000565838 421 ntTSL 3 BASIC10.2□□□□□ -0.78
HLA-DRB4X5D2U9 ZFYVE19-215ENST00000570108 1669 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
HLA-DRB4X5D2U9 ATF7-212ENST00000591397 860 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
HLA-DRB4X5D2U9 AC008687.7-203ENST00000598442 551 ntTSL 4 BASIC10.2□□□□□ -0.78
HLA-DRB4X5D2U9 AC103810.10-201ENST00000606504 343 ntBASIC10.2□□□□□ -0.78
HLA-DRB4X5D2U9 AL021578.1-201ENST00000613646 709 ntBASIC10.2□□□□□ -0.78
HLA-DRB4X5D2U9 DDC-212ENST00000615193 1674 ntTSL 3 BASIC10.2□□□□□ -0.78
HLA-DRB4X5D2U9 AC091769.1-201ENST00000619576 568 ntBASIC10.2□□□□□ -0.78
HLA-DRB4X5D2U9 PRSS45-202ENST00000620911 1041 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
HLA-DRB4X5D2U9 FLJ30679-201ENST00000624773 1980 ntBASIC10.2□□□□□ -0.78
HLA-DRB4X5D2U9 MFSD8-241ENST00000641686 4991 ntAPPRIS P1 BASIC10.2□□□□□ -0.78
HLA-DRB4X5D2U9 MYT1-201ENST00000328439 5535 ntAPPRIS P2 TSL 1 (best) BASIC10.2□□□□□ -0.78
HLA-DRB4X5D2U9 STARD8-203ENST00000374599 4841 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
HLA-DRB4X5D2U9 CACNA1C-209ENST00000399603 7377 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
HLA-DRB4X5D2U9 ACO1-203ENST00000541043 3618 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
HLA-DRB4X5D2U9 C17orf80-202ENST00000268942 3449 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
HLA-DRB4X5D2U9 WDR81-205ENST00000437219 3184 ntTSL 2 BASIC10.2□□□□□ -0.78
HLA-DRB4X5D2U9 AL031714.1-202ENST00000568106 3107 ntTSL 5 BASIC10.2□□□□□ -0.78
HLA-DRB4X5D2U9 ZMYND10-201ENST00000231749 2896 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
HLA-DRB4X5D2U9 CDCA3-202ENST00000422785 2760 ntTSL 2 BASIC10.2□□□□□ -0.78
HLA-DRB4X5D2U9 SUPT20HL1-201ENST00000436466 2618 ntBASIC10.2□□□□□ -0.78
HLA-DRB4X5D2U9 AC011700.1-201ENST00000610409 2627 ntBASIC10.2□□□□□ -0.78
HLA-DRB4X5D2U9 TBC1D8B-202ENST00000310452 2589 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
HLA-DRB4X5D2U9 TMEM254-213ENST00000613758 2154 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
HLA-DRB4X5D2U9 AC124319.4-201ENST00000622931 2161 ntBASIC10.19□□□□□ -0.78
HLA-DRB4X5D2U9 SETD1B-204ENST00000619791 5901 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
HLA-DRB4X5D2U9 DHX16-201ENST00000376437 1933 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
HLA-DRB4X5D2U9 CDH8-201ENST00000299345 3728 ntTSL 5 BASIC10.19□□□□□ -0.78
HLA-DRB4X5D2U9 SNRNP27-201ENST00000244227 1802 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
HLA-DRB4X5D2U9 BCL2L2-201ENST00000250405 3605 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
HLA-DRB4X5D2U9 PPP2R2C-204ENST00000506140 1780 ntTSL 2 BASIC10.19□□□□□ -0.78
HLA-DRB4X5D2U9 SNRK-201ENST00000296088 5183 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
HLA-DRB4X5D2U9 DPAGT1-217ENST00000639704 1719 ntTSL 5 BASIC10.19□□□□□ -0.78
HLA-DRB4X5D2U9 ASCC3-203ENST00000369143 3433 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
HLA-DRB4X5D2U9 DPP9-214ENST00000598800 3098 ntTSL 5 BASIC10.19□□□□□ -0.78
HLA-DRB4X5D2U9 AL353608.3-202ENST00000429953 4384 ntTSL 5 BASIC10.19□□□□□ -0.78
HLA-DRB4X5D2U9 ZNF180-201ENST00000221327 4335 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
HLA-DRB4X5D2U9 PPP1R1B-202ENST00000394265 1419 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
HLA-DRB4X5D2U9 GJB5-201ENST00000338513 1355 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
HLA-DRB4X5D2U9 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
HLA-DRB4X5D2U9 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
HLA-DRB4X5D2U9 ANXA5-202ENST00000501272 1363 ntTSL 5 BASIC10.19□□□□□ -0.78
HLA-DRB4X5D2U9 CCL5-201ENST00000603197 1365 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
HLA-DRB4X5D2U9 UBE2A-206ENST00000625938 1381 ntTSL 2 BASIC10.19□□□□□ -0.78
HLA-DRB4X5D2U9 FTX-216ENST00000638985 1367 ntTSL 5 BASIC10.19□□□□□ -0.78
HLA-DRB4X5D2U9 LDB3-205ENST00000429277 5436 ntTSL 2 BASIC10.19□□□□□ -0.78
HLA-DRB4X5D2U9 HEXA-201ENST00000268097 5252 ntAPPRIS P2 TSL 1 (best) BASIC10.19□□□□□ -0.78
HLA-DRB4X5D2U9 CSNK1E-201ENST00000359867 2642 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
HLA-DRB4X5D2U9 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC10.19□□□□□ -0.78
HLA-DRB4X5D2U9 PLA2G12B-201ENST00000373032 1128 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
HLA-DRB4X5D2U9 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
HLA-DRB4X5D2U9 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC10.19□□□□□ -0.78
HLA-DRB4X5D2U9 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
HLA-DRB4X5D2U9 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
HLA-DRB4X5D2U9 KRTAP10-5-201ENST00000400372 1150 ntAPPRIS P1 BASIC10.19□□□□□ -0.78
HLA-DRB4X5D2U9 GUSBP10-201ENST00000417412 665 ntBASIC10.19□□□□□ -0.78
HLA-DRB4X5D2U9 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC10.19□□□□□ -0.78
HLA-DRB4X5D2U9 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
HLA-DRB4X5D2U9 AL022332.1-202ENST00000432495 426 ntTSL 3 BASIC10.19□□□□□ -0.78
HLA-DRB4X5D2U9 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
HLA-DRB4X5D2U9 CSAG1-204ENST00000452779 627 ntAPPRIS P2 TSL 1 (best) BASIC10.19□□□□□ -0.78
HLA-DRB4X5D2U9 AADACL2-AS1-202ENST00000483843 628 ntTSL 5 BASIC10.19□□□□□ -0.78
HLA-DRB4X5D2U9 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC10.19□□□□□ -0.78
HLA-DRB4X5D2U9 AC019193.1-201ENST00000506678 823 ntBASIC10.19□□□□□ -0.78
HLA-DRB4X5D2U9 AC093300.1-201ENST00000510368 1201 ntBASIC10.19□□□□□ -0.78
HLA-DRB4X5D2U9 AP003068.3-201ENST00000527789 175 ntTSL 2 BASIC10.19□□□□□ -0.78
HLA-DRB4X5D2U9 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC10.19□□□□□ -0.78
HLA-DRB4X5D2U9 TXNDC17-208ENST00000574838 746 ntTSL 3 BASIC10.19□□□□□ -0.78
HLA-DRB4X5D2U9 MIR3907-201ENST00000579424 151 ntBASIC10.19□□□□□ -0.78
HLA-DRB4X5D2U9 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC10.19□□□□□ -0.78
HLA-DRB4X5D2U9 ZNF571-AS1-204ENST00000587121 822 ntTSL 3 BASIC10.19□□□□□ -0.78
HLA-DRB4X5D2U9 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
HLA-DRB4X5D2U9 AC012087.1-201ENST00000608068 809 ntTSL 5 BASIC10.19□□□□□ -0.78
HLA-DRB4X5D2U9 RPS10-207ENST00000621356 784 ntAPPRIS P1 TSL 2 BASIC10.19□□□□□ -0.78
HLA-DRB4X5D2U9 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC10.19□□□□□ -0.78
HLA-DRB4X5D2U9 AC027369.3-201ENST00000530465 3707 ntBASIC10.19□□□□□ -0.78
HLA-DRB4X5D2U9 GUCY2D-201ENST00000254854 3698 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
HLA-DRB4X5D2U9 TRPM5-203ENST00000533060 3562 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
HLA-DRB4X5D2U9 FBN1-201ENST00000316623 11756 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
HLA-DRB4X5D2U9 SNX25-201ENST00000264694 3264 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
HLA-DRB4X5D2U9 ARHGEF33-201ENST00000398800 4300 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
HLA-DRB4X5D2U9 KIF21B-202ENST00000360529 5389 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
HLA-DRB4X5D2U9 TBC1D3L-201ENST00000612727 2148 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
HLA-DRB4X5D2U9 SRSF1-205ENST00000582730 3117 ntTSL 2 BASIC10.19□□□□□ -0.78
HLA-DRB4X5D2U9 SLC5A11-203ENST00000449109 2069 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
HLA-DRB4X5D2U9 AC099521.2-201ENST00000619354 2036 ntBASIC10.19□□□□□ -0.78
HLA-DRB4X5D2U9 TNFSF8-201ENST00000223795 1906 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
HLA-DRB4X5D2U9 KYAT1-201ENST00000302586 1903 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms