Protein–RNA interactions for Protein: Q2TBC4

PRICKLE4, Prickle-like protein 4, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE4Q2TBC4 AC090136.2-201ENST00000517809 420 ntBASIC12.45□□□□□ -0.42
PRICKLE4Q2TBC4 AC107959.3-201ENST00000520840 484 ntTSL 5 BASIC12.45□□□□□ -0.42
PRICKLE4Q2TBC4 SLC25A3-215ENST00000551265 580 ntTSL 4 BASIC12.45□□□□□ -0.42
PRICKLE4Q2TBC4 AC073569.2-201ENST00000551995 354 ntTSL 5 BASIC12.45□□□□□ -0.42
PRICKLE4Q2TBC4 CYB5D2-202ENST00000573984 495 ntTSL 4 BASIC12.45□□□□□ -0.42
PRICKLE4Q2TBC4 SNHG15-205ENST00000580458 710 ntTSL 2 BASIC12.45□□□□□ -0.42
PRICKLE4Q2TBC4 RPL18A-203ENST00000599870 1084 ntTSL 2 BASIC12.45□□□□□ -0.42
PRICKLE4Q2TBC4 APOBEC3H-207ENST00000613996 465 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
PRICKLE4Q2TBC4 AC073578.2-201ENST00000618927 464 ntTSL 4 BASIC12.45□□□□□ -0.42
PRICKLE4Q2TBC4 SNORA50D-202ENST00000627561 132 ntBASIC12.45□□□□□ -0.42
PRICKLE4Q2TBC4 ESR1-214ENST00000638569 132 ntTSL 5 BASIC12.45□□□□□ -0.42
PRICKLE4Q2TBC4 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC12.45□□□□□ -0.42
PRICKLE4Q2TBC4 ARMCX6-201ENST00000361910 1846 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
PRICKLE4Q2TBC4 AC098934.1-201ENST00000443294 1835 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
PRICKLE4Q2TBC4 IFT57-201ENST00000264538 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
PRICKLE4Q2TBC4 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
PRICKLE4Q2TBC4 STMN1-206ENST00000455785 1504 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
PRICKLE4Q2TBC4 MLXIP-208ENST00000538698 5097 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
PRICKLE4Q2TBC4 NR1H4-203ENST00000392986 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
PRICKLE4Q2TBC4 AC009123.1-202ENST00000565643 2551 ntTSL 2 BASIC12.45□□□□□ -0.42
PRICKLE4Q2TBC4 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
PRICKLE4Q2TBC4 ZNF335-201ENST00000322927 4430 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
PRICKLE4Q2TBC4 RAB18-208ENST00000611151 4931 ntTSL 5 BASIC12.45□□□□□ -0.42
PRICKLE4Q2TBC4 CLIC4-201ENST00000374379 4346 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
PRICKLE4Q2TBC4 PCDHB10-201ENST00000239446 3290 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
PRICKLE4Q2TBC4 EWSAT1-201ENST00000415504 2214 ntTSL 2 BASIC12.45□□□□□ -0.42
PRICKLE4Q2TBC4 INVS-201ENST00000262456 2968 ntTSL 5 BASIC12.45□□□□□ -0.42
PRICKLE4Q2TBC4 MAX-212ENST00000555932 1673 ntTSL 5 BASIC12.45□□□□□ -0.42
PRICKLE4Q2TBC4 UQCRFS1-201ENST00000304863 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
PRICKLE4Q2TBC4 AGAP4-203ENST00000448048 2439 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
PRICKLE4Q2TBC4 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
PRICKLE4Q2TBC4 ZNF792-201ENST00000404801 3888 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
PRICKLE4Q2TBC4 AC064850.1-201ENST00000413279 1398 ntBASIC12.44□□□□□ -0.42
PRICKLE4Q2TBC4 AC019205.2-203ENST00000421315 3362 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
PRICKLE4Q2TBC4 AGAP12P-202ENST00000603888 2141 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
PRICKLE4Q2TBC4 AC241585.2-201ENST00000578899 2307 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
PRICKLE4Q2TBC4 ENSA-208ENST00000369014 2085 ntAPPRIS P4 TSL 1 (best) BASIC12.44□□□□□ -0.42
PRICKLE4Q2TBC4 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
PRICKLE4Q2TBC4 GPR39-201ENST00000329321 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
PRICKLE4Q2TBC4 PIK3R3-203ENST00000420542 5174 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
PRICKLE4Q2TBC4 MCF2L-204ENST00000375608 3648 ntTSL 5 BASIC12.44□□□□□ -0.42
PRICKLE4Q2TBC4 AP000347.1-201ENST00000417194 5004 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
PRICKLE4Q2TBC4 PRDX1-202ENST00000319248 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
PRICKLE4Q2TBC4 RN7SKP255-201ENST00000363442 313 ntBASIC12.44□□□□□ -0.42
PRICKLE4Q2TBC4 RN7SKP203-201ENST00000363618 332 ntBASIC12.44□□□□□ -0.42
PRICKLE4Q2TBC4 RN7SKP71-201ENST00000364558 318 ntBASIC12.44□□□□□ -0.42
PRICKLE4Q2TBC4 7SK.1-201ENST00000365328 331 ntBASIC12.44□□□□□ -0.42
PRICKLE4Q2TBC4 AK1-202ENST00000373156 757 ntAPPRIS P1 TSL 3 BASIC12.44□□□□□ -0.42
PRICKLE4Q2TBC4 OR7E155P-201ENST00000412208 1014 ntBASIC12.44□□□□□ -0.42
PRICKLE4Q2TBC4 AL359853.1-202ENST00000415218 544 ntTSL 2 BASIC12.44□□□□□ -0.42
PRICKLE4Q2TBC4 GGT8P-201ENST00000418938 532 ntBASIC12.44□□□□□ -0.42
PRICKLE4Q2TBC4 CD37-203ENST00000426897 1204 ntTSL 2 BASIC12.44□□□□□ -0.42
PRICKLE4Q2TBC4 AC114781.1-201ENST00000450559 1028 ntBASIC12.44□□□□□ -0.42
PRICKLE4Q2TBC4 AL445471.1-201ENST00000456316 820 ntTSL 5 BASIC12.44□□□□□ -0.42
PRICKLE4Q2TBC4 CXXC1P1-202ENST00000489409 1212 ntBASIC12.44□□□□□ -0.42
PRICKLE4Q2TBC4 APOPT1-209ENST00000492189 513 ntTSL 3 BASIC12.44□□□□□ -0.42
PRICKLE4Q2TBC4 OSMR-AS1-202ENST00000512519 837 ntTSL 2 BASIC12.44□□□□□ -0.42
PRICKLE4Q2TBC4 SMAD1-AS1-201ENST00000513542 481 ntTSL 2 BASIC12.44□□□□□ -0.42
PRICKLE4Q2TBC4 AC246817.2-203ENST00000517357 569 ntTSL 4 BASIC12.44□□□□□ -0.42
PRICKLE4Q2TBC4 AC246817.2-202ENST00000519393 564 ntTSL 4 BASIC12.44□□□□□ -0.42
PRICKLE4Q2TBC4 IGHVII-33-1-201ENST00000524010 280 ntBASIC12.44□□□□□ -0.42
PRICKLE4Q2TBC4 RBM4B-202ENST00000524637 867 ntTSL 5 BASIC12.44□□□□□ -0.42
PRICKLE4Q2TBC4 AC087203.1-201ENST00000532111 1181 ntBASIC12.44□□□□□ -0.42
PRICKLE4Q2TBC4 SLC25A3-206ENST00000547534 556 ntTSL 2 BASIC12.44□□□□□ -0.42
PRICKLE4Q2TBC4 C2orf69P1-201ENST00000563532 1093 ntBASIC12.44□□□□□ -0.42
PRICKLE4Q2TBC4 SMAD7-208ENST00000591805 1152 ntTSL 2 BASIC12.44□□□□□ -0.42
PRICKLE4Q2TBC4 CSAG3-203ENST00000638835 793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
PRICKLE4Q2TBC4 CSAG2-204ENST00000640702 793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
PRICKLE4Q2TBC4 AL139823.1-201ENST00000641871 1225 ntBASIC12.44□□□□□ -0.42
PRICKLE4Q2TBC4 PPP1R8-201ENST00000236412 2414 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
PRICKLE4Q2TBC4 NFIX-201ENST00000358552 1727 ntTSL 5 BASIC12.44□□□□□ -0.42
PRICKLE4Q2TBC4 MKL1-201ENST00000355630 4496 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
PRICKLE4Q2TBC4 SLC35F2-203ENST00000525071 3331 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
PRICKLE4Q2TBC4 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
PRICKLE4Q2TBC4 LAMP2-201ENST00000200639 1867 ntAPPRIS P5 TSL 1 (best) BASIC12.44□□□□□ -0.42
PRICKLE4Q2TBC4 TRIM60-201ENST00000341062 1867 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
PRICKLE4Q2TBC4 ADM2-202ENST00000395738 4276 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
PRICKLE4Q2TBC4 KIAA0391-211ENST00000605870 1406 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
PRICKLE4Q2TBC4 CCDC3-202ENST00000378839 3180 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
PRICKLE4Q2TBC4 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
PRICKLE4Q2TBC4 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
PRICKLE4Q2TBC4 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
PRICKLE4Q2TBC4 LIMS1-204ENST00000409441 1627 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
PRICKLE4Q2TBC4 CBR4-202ENST00000504480 1602 ntTSL 2 BASIC12.44□□□□□ -0.42
PRICKLE4Q2TBC4 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
PRICKLE4Q2TBC4 AIFM1P1-201ENST00000413342 1841 ntBASIC12.44□□□□□ -0.42
PRICKLE4Q2TBC4 FSTL1-202ENST00000424703 1396 ntTSL 2 BASIC12.43□□□□□ -0.42
PRICKLE4Q2TBC4 MLX-203ENST00000435881 2428 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
PRICKLE4Q2TBC4 DDR1-225ENST00000376568 3894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
PRICKLE4Q2TBC4 CLUAP1-202ENST00000571025 5126 ntTSL 2 BASIC12.43□□□□□ -0.42
PRICKLE4Q2TBC4 AXIN2-209ENST00000618960 4060 ntTSL 5 BASIC12.43□□□□□ -0.42
PRICKLE4Q2TBC4 SYNPO-205ENST00000522122 5098 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
PRICKLE4Q2TBC4 ARSG-209ENST00000621439 2599 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
PRICKLE4Q2TBC4 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
PRICKLE4Q2TBC4 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
PRICKLE4Q2TBC4 LINC00967-203ENST00000518035 1502 ntTSL 2 BASIC12.43□□□□□ -0.42
PRICKLE4Q2TBC4 AC005906.2-205ENST00000640862 1522 ntTSL 5 BASIC12.43□□□□□ -0.42
PRICKLE4Q2TBC4 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
PRICKLE4Q2TBC4 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
PRICKLE4Q2TBC4 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms