Protein–RNA interactions for Protein: P48539

PCP4, Calmodulin regulator protein PCP4, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4P48539 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC8.4□□□□□ -1.06
PCP4P48539 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC8.4□□□□□ -1.06
PCP4P48539 AC002127.2-201ENST00000444032 792 ntTSL 3 BASIC8.4□□□□□ -1.06
PCP4P48539 Z85996.1-201ENST00000494644 937 ntBASIC8.4□□□□□ -1.06
PCP4P48539 RN7SL519P-201ENST00000497925 288 ntBASIC8.4□□□□□ -1.06
PCP4P48539 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC8.4□□□□□ -1.06
PCP4P48539 AP003041.3-201ENST00000527151 707 ntBASIC8.4□□□□□ -1.06
PCP4P48539 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
PCP4P48539 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC8.4□□□□□ -1.06
PCP4P48539 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC8.4□□□□□ -1.06
PCP4P48539 MIR4687-201ENST00000583618 80 ntBASIC8.4□□□□□ -1.06
PCP4P48539 MIR6765-201ENST00000614092 87 ntBASIC8.4□□□□□ -1.06
PCP4P48539 AC026887.1-201ENST00000624657 2985 ntBASIC8.4□□□□□ -1.06
PCP4P48539 USP39-207ENST00000450066 2086 ntTSL 2 BASIC8.4□□□□□ -1.06
PCP4P48539 AC021016.2-201ENST00000562328 2048 ntBASIC8.4□□□□□ -1.06
PCP4P48539 RBM19-202ENST00000392561 3574 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
PCP4P48539 PPP2R1B-202ENST00000341980 1953 ntTSL 2 BASIC8.4□□□□□ -1.06
PCP4P48539 GMPR2-202ENST00000355299 1972 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
PCP4P48539 AC138207.6-201ENST00000579164 1967 ntBASIC8.4□□□□□ -1.06
PCP4P48539 CDH8-203ENST00000577390 9721 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
PCP4P48539 SDK2-201ENST00000392650 10723 ntAPPRIS P1 TSL 5 BASIC8.4□□□□□ -1.07
PCP4P48539 TREML2-201ENST00000483722 3302 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
PCP4P48539 AL356599.1-205ENST00000606388 3961 ntTSL 1 (best) BASIC8.4□□□□□ -1.07
PCP4P48539 TRAPPC6B-202ENST00000347691 3229 ntTSL 1 (best) BASIC8.4□□□□□ -1.07
PCP4P48539 TRNAU1AP-201ENST00000373830 1799 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
PCP4P48539 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC8.4□□□□□ -1.07
PCP4P48539 ZKSCAN1-201ENST00000324306 9418 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
PCP4P48539 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC8.4□□□□□ -1.07
PCP4P48539 CD1E-208ENST00000368163 1678 ntTSL 1 (best) BASIC8.4□□□□□ -1.07
PCP4P48539 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC8.4□□□□□ -1.07
PCP4P48539 MAP3K19-202ENST00000375844 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC8.4□□□□□ -1.07
PCP4P48539 AL606760.3-201ENST00000569869 3591 ntBASIC8.4□□□□□ -1.07
PCP4P48539 NTRK3-207ENST00000542733 2287 ntTSL 2 BASIC8.4□□□□□ -1.07
PCP4P48539 KIF18BP1-201ENST00000567585 2264 ntBASIC8.4□□□□□ -1.07
PCP4P48539 CEACAM5-210ENST00000617332 2228 ntAPPRIS P3 TSL 1 (best) BASIC8.39□□□□□ -1.07
PCP4P48539 SMC3-201ENST00000361804 4114 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
PCP4P48539 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC8.39□□□□□ -1.07
PCP4P48539 AC010460.3-201ENST00000511359 1579 ntBASIC8.39□□□□□ -1.07
PCP4P48539 DRD1-201ENST00000393752 4054 ntAPPRIS P1 TSL 2 BASIC8.39□□□□□ -1.07
PCP4P48539 AC003986.1-201ENST00000452700 1526 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
PCP4P48539 SPIN1-201ENST00000375859 4484 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
PCP4P48539 MTSS1-202ENST00000378017 4458 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
PCP4P48539 STK32B-207ENST00000512636 3272 ntTSL 5 BASIC8.39□□□□□ -1.07
PCP4P48539 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
PCP4P48539 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC8.39□□□□□ -1.07
PCP4P48539 UBL7-204ENST00000564488 1477 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
PCP4P48539 ZFP30-204ENST00000514101 4440 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
PCP4P48539 CD302-201ENST00000259053 3741 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
PCP4P48539 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
PCP4P48539 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC8.39□□□□□ -1.07
PCP4P48539 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC8.39□□□□□ -1.07
PCP4P48539 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
PCP4P48539 PTPRA-203ENST00000356147 3135 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
PCP4P48539 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
PCP4P48539 SLC2A9-208ENST00000506583 1927 ntAPPRIS ALT2 TSL 5 BASIC8.39□□□□□ -1.07
PCP4P48539 CARD8-215ENST00000520015 1931 ntTSL 2 BASIC8.39□□□□□ -1.07
PCP4P48539 HSPA8-207ENST00000526110 1924 ntTSL 5 BASIC8.39□□□□□ -1.07
PCP4P48539 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC8.39□□□□□ -1.07
PCP4P48539 TK2-205ENST00000527284 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC8.39□□□□□ -1.07
PCP4P48539 NDEL1-203ENST00000402554 1858 ntTSL 5 BASIC8.39□□□□□ -1.07
PCP4P48539 PITX2-212ENST00000614423 1866 ntAPPRIS ALT1 TSL 5 BASIC8.39□□□□□ -1.07
PCP4P48539 HIPK2-203ENST00000428878 3969 ntAPPRIS ALT2 TSL 1 (best) BASIC8.39□□□□□ -1.07
PCP4P48539 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC8.39□□□□□ -1.07
PCP4P48539 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
PCP4P48539 AMPD1-201ENST00000369538 2392 ntAPPRIS ALT2 TSL 2 BASIC8.39□□□□□ -1.07
PCP4P48539 ARHGEF7-203ENST00000375723 4957 ntTSL 5 BASIC8.39□□□□□ -1.07
PCP4P48539 GPATCH11-202ENST00000409774 3906 ntAPPRIS P1 TSL 2 BASIC8.39□□□□□ -1.07
PCP4P48539 AL445231.1-201ENST00000445523 1814 ntTSL 2 BASIC8.39□□□□□ -1.07
PCP4P48539 PEX1-204ENST00000438045 3329 ntTSL 2 BASIC8.39□□□□□ -1.07
PCP4P48539 SUN1-202ENST00000389574 3812 ntAPPRIS P3 TSL 2 BASIC8.39□□□□□ -1.07
PCP4P48539 HIST1H2BC-202ENST00000396984 571 ntAPPRIS P1 BASIC8.39□□□□□ -1.07
PCP4P48539 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC8.39□□□□□ -1.07
PCP4P48539 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
PCP4P48539 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC8.39□□□□□ -1.07
PCP4P48539 RAB11B-205ENST00000601897 577 ntTSL 3 BASIC8.39□□□□□ -1.07
PCP4P48539 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC8.39□□□□□ -1.07
PCP4P48539 AC097493.4-201ENST00000641197 219 ntBASIC8.39□□□□□ -1.07
PCP4P48539 LINC01268-201ENST00000434296 2755 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
PCP4P48539 MYO1H-202ENST00000431443 4258 ntAPPRIS P1 TSL 5 BASIC8.39□□□□□ -1.07
PCP4P48539 BRPF3-211ENST00000534400 4254 ntTSL 5 BASIC8.39□□□□□ -1.07
PCP4P48539 MEIS2-205ENST00000397624 2748 ntTSL 5 BASIC8.39□□□□□ -1.07
PCP4P48539 LPIN3-205ENST00000632009 4132 ntAPPRIS P2 TSL 1 (best) BASIC8.39□□□□□ -1.07
PCP4P48539 TARS2-205ENST00000438568 2188 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
PCP4P48539 AL359852.1-201ENST00000624609 2197 ntBASIC8.39□□□□□ -1.07
PCP4P48539 FBXO10-202ENST00000432825 4575 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
PCP4P48539 TUBD1-205ENST00000394239 1680 ntTSL 2 BASIC8.39□□□□□ -1.07
PCP4P48539 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
PCP4P48539 COL10A1-202ENST00000327673 3498 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
PCP4P48539 GOLGA6C-201ENST00000300576 2082 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
PCP4P48539 CXCR1-201ENST00000295683 2488 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
PCP4P48539 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC8.39□□□□□ -1.07
PCP4P48539 KEL-201ENST00000355265 2812 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
PCP4P48539 TMEM139-204ENST00000409541 1907 ntAPPRIS P1 TSL 2 BASIC8.39□□□□□ -1.07
PCP4P48539 CDC42SE1-207ENST00000540998 3181 ntAPPRIS P1 TSL 2 BASIC8.38□□□□□ -1.07
PCP4P48539 SCRN1-206ENST00000426154 5275 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
PCP4P48539 PTPRT-205ENST00000373193 12681 ntAPPRIS ALT2 TSL 1 (best) BASIC8.38□□□□□ -1.07
PCP4P48539 RN7SKP23-201ENST00000625159 4301 ntBASIC8.38□□□□□ -1.07
PCP4P48539 EFL1-202ENST00000359445 3470 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
PCP4P48539 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
PCP4P48539 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC8.38□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 205.1 ms