Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 KCTD10-201ENST00000228495 4163 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SSR1P43307 AMACR-201ENST00000335606 4153 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SSR1P43307 TEX35-204ENST00000367642 2452 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
SSR1P43307 FMR1-215ENST00000616382 1648 ntTSL 5 BASIC14.43□□□□□ -0.1
SSR1P43307 TMPRSS13-205ENST00000526090 2592 ntTSL 2 BASIC14.43□□□□□ -0.1
SSR1P43307 FAM46A-202ENST00000369754 5664 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
SSR1P43307 WDR47-204ENST00000369965 4240 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
SSR1P43307 PPP1R8-203ENST00000373931 2651 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SSR1P43307 PPARGC1B-202ENST00000360453 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
SSR1P43307 RNF220-203ENST00000361799 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SSR1P43307 RNF220-204ENST00000372247 3010 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
SSR1P43307 AC019205.2-203ENST00000421315 3362 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SSR1P43307 HCN3-201ENST00000368358 3718 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SSR1P43307 KCNH4-202ENST00000607371 3723 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
SSR1P43307 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC14.43□□□□□ -0.1
SSR1P43307 PANK3-201ENST00000239231 10506 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SSR1P43307 RIC8B-201ENST00000355478 3207 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SSR1P43307 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SSR1P43307 DAXX-202ENST00000374542 2613 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
SSR1P43307 NME7-203ENST00000472647 1590 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
SSR1P43307 MED16-204ENST00000395808 3420 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
SSR1P43307 CADM1-204ENST00000536727 3520 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SSR1P43307 PHF10-206ENST00000621772 1651 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
SSR1P43307 ZBTB20-206ENST00000464560 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SSR1P43307 DRD2-208ENST00000542968 2467 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
SSR1P43307 TRIM37-203ENST00000393066 3622 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SSR1P43307 ZNF142-205ENST00000449707 5909 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SSR1P43307 DCAF16-201ENST00000382247 4548 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
SSR1P43307 KCNH1-209ENST00000639952 8075 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SSR1P43307 GOLGA8UP-201ENST00000527159 1755 ntBASIC14.42□□□□□ -0.1
SSR1P43307 GYG2-204ENST00000381163 3393 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
SSR1P43307 KRT8P31-201ENST00000504812 1408 ntBASIC14.42□□□□□ -0.1
SSR1P43307 IFT81-201ENST00000242591 3108 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SSR1P43307 KRT74-201ENST00000305620 2788 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SSR1P43307 ZNF773-205ENST00000599847 5832 ntTSL 2 BASIC14.42□□□□□ -0.1
SSR1P43307 TXLNA-202ENST00000373610 4854 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SSR1P43307 EIF3CL-201ENST00000380876 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SSR1P43307 ATP11A-202ENST00000375645 8795 ntAPPRIS P2 TSL 5 BASIC14.42□□□□□ -0.1
SSR1P43307 KLHL23-202ENST00000392647 4077 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SSR1P43307 SLC2A14-205ENST00000535295 1732 ntTSL 2 BASIC14.42□□□□□ -0.1
SSR1P43307 KIF9-208ENST00000452770 2707 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SSR1P43307 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SSR1P43307 TPM3-211ENST00000368531 1115 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SSR1P43307 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SSR1P43307 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC14.42□□□□□ -0.1
SSR1P43307 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
SSR1P43307 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SSR1P43307 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC14.42□□□□□ -0.1
SSR1P43307 PPP1R2P4-201ENST00000424051 595 ntBASIC14.42□□□□□ -0.1
SSR1P43307 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC14.42□□□□□ -0.1
SSR1P43307 OAZ3-203ENST00000453029 729 ntTSL 5 BASIC14.42□□□□□ -0.1
SSR1P43307 AL355376.1-201ENST00000456082 517 ntTSL 3 BASIC14.42□□□□□ -0.1
SSR1P43307 AC112487.1-201ENST00000498032 1097 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SSR1P43307 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
SSR1P43307 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
SSR1P43307 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC14.42□□□□□ -0.1
SSR1P43307 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC14.42□□□□□ -0.1
SSR1P43307 AC026803.1-201ENST00000569130 274 ntBASIC14.42□□□□□ -0.1
SSR1P43307 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SSR1P43307 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SSR1P43307 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC14.42□□□□□ -0.1
SSR1P43307 SIGLEC22P-201ENST00000599104 714 ntBASIC14.42□□□□□ -0.1
SSR1P43307 SIGLEC22P-202ENST00000602065 544 ntTSL 4 BASIC14.42□□□□□ -0.1
SSR1P43307 AL049840.2-201ENST00000602722 535 ntBASIC14.42□□□□□ -0.1
SSR1P43307 GPR182-203ENST00000622922 591 ntBASIC14.42□□□□□ -0.1
SSR1P43307 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SSR1P43307 SLC4A11-207ENST00000539553 2832 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
SSR1P43307 ZNF331-201ENST00000253144 5042 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SSR1P43307 BCL2L11-217ENST00000610735 5120 ntTSL 5 BASIC14.42□□□□□ -0.1
SSR1P43307 FAM53B-203ENST00000392754 3557 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
SSR1P43307 GUCY1B3-205ENST00000505764 2456 ntTSL 2 BASIC14.42□□□□□ -0.1
SSR1P43307 STRC-213ENST00000541030 5305 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
SSR1P43307 AC036108.2-201ENST00000566974 2562 ntTSL 2 BASIC14.42□□□□□ -0.1
SSR1P43307 RASA4-203ENST00000461209 3244 ntTSL 2 BASIC14.42□□□□□ -0.1
SSR1P43307 DUSP10-201ENST00000366899 2676 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SSR1P43307 ADPRH-204ENST00000478399 4546 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SSR1P43307 KIF13A-201ENST00000259711 5941 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
SSR1P43307 CDC6-201ENST00000209728 4810 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SSR1P43307 UBE2W-201ENST00000419880 2315 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SSR1P43307 HAO1-201ENST00000378789 1777 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SSR1P43307 KIR3DL1-203ENST00000391728 1871 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
SSR1P43307 GOLGA8K-202ENST00000512626 1894 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
SSR1P43307 GLIS3-202ENST00000381971 3961 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
SSR1P43307 PHKG1-201ENST00000297373 1431 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
SSR1P43307 MYO7A-201ENST00000409619 7106 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SSR1P43307 BCL2L1-203ENST00000376062 2578 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SSR1P43307 C12orf66-201ENST00000311915 2698 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SSR1P43307 PRPF4-201ENST00000374198 2787 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
SSR1P43307 SLC6A2-201ENST00000219833 2858 ntTSL 5 BASIC14.41□□□□□ -0.1
SSR1P43307 TMEM100-201ENST00000424486 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SSR1P43307 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SSR1P43307 LRCH3-203ENST00000425562 2970 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
SSR1P43307 ZNF277-201ENST00000361822 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SSR1P43307 HSPA8-221ENST00000533540 1826 ntTSL 5 BASIC14.41□□□□□ -0.1
SSR1P43307 CICP9-201ENST00000444451 1913 ntBASIC14.41□□□□□ -0.1
SSR1P43307 SLC5A11-211ENST00000569071 1919 ntTSL 5 BASIC14.41□□□□□ -0.1
SSR1P43307 DYSF-208ENST00000410020 6657 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
SSR1P43307 MYRF-201ENST00000265460 5745 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
SSR1P43307 EMB-201ENST00000303221 4281 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
SSR1P43307 PTH2R-201ENST00000272847 2713 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 66.3 ms