Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 ATP5J-204ENST00000400093 1179 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
MTHFRP42898 CACYBPP3-201ENST00000406011 625 ntBASIC14.02□□□□□ -0.17
MTHFRP42898 HDHD5-AS1-202ENST00000431923 616 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
MTHFRP42898 SLC25A15P1-201ENST00000456738 342 ntBASIC14.02□□□□□ -0.17
MTHFRP42898 CST7-201ENST00000480798 930 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
MTHFRP42898 AC104115.1-201ENST00000484005 623 ntBASIC14.02□□□□□ -0.17
MTHFRP42898 NDUFA3-214ENST00000485876 963 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
MTHFRP42898 FAR1-IT1-201ENST00000525233 368 ntTSL 3 BASIC14.02□□□□□ -0.17
MTHFRP42898 AC008750.2-201ENST00000526996 627 ntTSL 3 BASIC14.02□□□□□ -0.17
MTHFRP42898 AP001102.1-201ENST00000528959 409 ntBASIC14.02□□□□□ -0.17
MTHFRP42898 IL32-230ENST00000551122 733 ntAPPRIS ALT2 TSL 3 BASIC14.02□□□□□ -0.17
MTHFRP42898 AC010183.1-201ENST00000552413 559 ntTSL 4 BASIC14.02□□□□□ -0.17
MTHFRP42898 AC142381.4-201ENST00000566806 702 ntTSL 3 BASIC14.02□□□□□ -0.17
MTHFRP42898 AC142086.5-201ENST00000567619 702 ntTSL 5 BASIC14.02□□□□□ -0.17
MTHFRP42898 SMIM28-201ENST00000573100 855 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
MTHFRP42898 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
MTHFRP42898 NCS1-203ENST00000630865 1092 ntTSL 3 BASIC14.02□□□□□ -0.17
MTHFRP42898 Z82244.2-201ENST00000632196 448 ntBASIC14.02□□□□□ -0.17
MTHFRP42898 AC138627.1-201ENST00000641127 1257 ntBASIC14.02□□□□□ -0.17
MTHFRP42898 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
MTHFRP42898 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
MTHFRP42898 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC14.02□□□□□ -0.17
MTHFRP42898 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
MTHFRP42898 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC14.02□□□□□ -0.17
MTHFRP42898 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
MTHFRP42898 RGS12-202ENST00000338806 3010 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
MTHFRP42898 LINC02486-201ENST00000604157 3000 ntBASIC14.02□□□□□ -0.17
MTHFRP42898 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC14.02□□□□□ -0.17
MTHFRP42898 MORN4-201ENST00000307450 2315 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
MTHFRP42898 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
MTHFRP42898 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
MTHFRP42898 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
MTHFRP42898 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC14.02□□□□□ -0.17
MTHFRP42898 ZNF143-202ENST00000396597 1954 ntTSL 2 BASIC14.02□□□□□ -0.17
MTHFRP42898 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC14.02□□□□□ -0.17
MTHFRP42898 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
MTHFRP42898 MUC1-225ENST00000612778 1836 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
MTHFRP42898 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
MTHFRP42898 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
MTHFRP42898 MRPS9-201ENST00000258455 1500 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
MTHFRP42898 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
MTHFRP42898 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
MTHFRP42898 LINC00969-231ENST00000597482 1476 ntTSL 5 BASIC14.01□□□□□ -0.17
MTHFRP42898 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
MTHFRP42898 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
MTHFRP42898 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC14.01□□□□□ -0.17
MTHFRP42898 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
MTHFRP42898 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
MTHFRP42898 INCA1-201ENST00000355025 1383 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
MTHFRP42898 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
MTHFRP42898 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC14.01□□□□□ -0.17
MTHFRP42898 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
MTHFRP42898 POP5-201ENST00000341039 913 ntTSL 2 BASIC14.01□□□□□ -0.17
MTHFRP42898 MARCKSL1P2-201ENST00000401037 976 ntBASIC14.01□□□□□ -0.17
MTHFRP42898 OR2T32P-201ENST00000403423 963 ntBASIC14.01□□□□□ -0.17
MTHFRP42898 SAA1-202ENST00000405158 675 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
MTHFRP42898 AKT3-IT1-201ENST00000417120 517 ntTSL 5 BASIC14.01□□□□□ -0.17
MTHFRP42898 RNASEH2CP1-201ENST00000454281 502 ntBASIC14.01□□□□□ -0.17
MTHFRP42898 RN7SL2-201ENST00000490232 300 ntBASIC14.01□□□□□ -0.17
MTHFRP42898 NMNAT3-212ENST00000511444 873 ntTSL 3 BASIC14.01□□□□□ -0.17
MTHFRP42898 AC099524.1-203ENST00000565272 756 ntTSL 5 BASIC14.01□□□□□ -0.17
MTHFRP42898 Metazoa_SRP.147-201ENST00000576563 312 ntBASIC14.01□□□□□ -0.17
MTHFRP42898 RN7SL4P-201ENST00000584058 295 ntBASIC14.01□□□□□ -0.17
MTHFRP42898 IFNL3P1-201ENST00000595082 501 ntBASIC14.01□□□□□ -0.17
MTHFRP42898 URGCP-MRPS24-201ENST00000603700 795 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
MTHFRP42898 CBR3-AS1-206ENST00000608632 659 ntTSL 5 BASIC14.01□□□□□ -0.17
MTHFRP42898 AC083798.2-202ENST00000609469 553 ntTSL 4 BASIC14.01□□□□□ -0.17
MTHFRP42898 NF1P11-201ENST00000621292 1282 ntBASIC14.01□□□□□ -0.17
MTHFRP42898 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
MTHFRP42898 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
MTHFRP42898 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
MTHFRP42898 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
MTHFRP42898 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
MTHFRP42898 TUBD1-202ENST00000340993 1769 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
MTHFRP42898 HADH-202ENST00000403312 1752 ntTSL 5 BASIC14.01□□□□□ -0.17
MTHFRP42898 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
MTHFRP42898 DDC-212ENST00000615193 1674 ntTSL 3 BASIC14.01□□□□□ -0.17
MTHFRP42898 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
MTHFRP42898 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
MTHFRP42898 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
MTHFRP42898 TRIML2-207ENST00000512729 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
MTHFRP42898 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
MTHFRP42898 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
MTHFRP42898 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC14□□□□□ -0.17
MTHFRP42898 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
MTHFRP42898 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC14□□□□□ -0.17
MTHFRP42898 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC14□□□□□ -0.17
MTHFRP42898 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
MTHFRP42898 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
MTHFRP42898 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC14□□□□□ -0.17
MTHFRP42898 AL031587.5-201ENST00000624344 1849 ntBASIC14□□□□□ -0.17
MTHFRP42898 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC14□□□□□ -0.17
MTHFRP42898 MYL3-201ENST00000292327 924 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
MTHFRP42898 OR6S1-201ENST00000320704 996 ntAPPRIS P1 BASIC14□□□□□ -0.17
MTHFRP42898 RN7SKP255-201ENST00000363442 313 ntBASIC14□□□□□ -0.17
MTHFRP42898 RN7SKP203-201ENST00000363618 332 ntBASIC14□□□□□ -0.17
MTHFRP42898 RN7SKP71-201ENST00000364558 318 ntBASIC14□□□□□ -0.17
MTHFRP42898 7SK.1-201ENST00000365328 331 ntBASIC14□□□□□ -0.17
MTHFRP42898 RBMXP1-201ENST00000408004 1191 ntBASIC14□□□□□ -0.17
MTHFRP42898 AP001331.1-201ENST00000413008 1015 ntBASIC14□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms