Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 RPSAP6-201ENST00000417882 882 ntBASIC13.63□□□□□ -0.23
SHROOM3Q8TF72 AL118511.1-201ENST00000439341 794 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SHROOM3Q8TF72 AC092903.1-201ENST00000466506 262 ntBASIC13.63□□□□□ -0.23
SHROOM3Q8TF72 AC107463.1-201ENST00000508605 667 ntTSL 3 BASIC13.63□□□□□ -0.23
SHROOM3Q8TF72 AC006262.2-202ENST00000600152 333 ntTSL 2 BASIC13.63□□□□□ -0.23
SHROOM3Q8TF72 NRSN2-206ENST00000608736 712 ntTSL 3 BASIC13.63□□□□□ -0.23
SHROOM3Q8TF72 AC090510.3-201ENST00000615831 821 ntBASIC13.63□□□□□ -0.23
SHROOM3Q8TF72 CRABP2-204ENST00000621784 1033 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
SHROOM3Q8TF72 DRD2-201ENST00000346454 2433 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SHROOM3Q8TF72 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SHROOM3Q8TF72 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
SHROOM3Q8TF72 OCA2-201ENST00000353809 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
SHROOM3Q8TF72 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC13.63□□□□□ -0.23
SHROOM3Q8TF72 RHBDL2-201ENST00000289248 2129 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
SHROOM3Q8TF72 CXorf40B-203ENST00000370406 1653 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
SHROOM3Q8TF72 Z98259.1-201ENST00000564261 1697 ntBASIC13.63□□□□□ -0.23
SHROOM3Q8TF72 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SHROOM3Q8TF72 USP36-202ENST00000449938 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
SHROOM3Q8TF72 RC3H2-201ENST00000335387 3081 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SHROOM3Q8TF72 CYP24A1-203ENST00000395955 2227 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SHROOM3Q8TF72 PPARA-202ENST00000402126 1558 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SHROOM3Q8TF72 DMC1-207ENST00000616615 1595 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SHROOM3Q8TF72 GFI1B-203ENST00000372123 1514 ntTSL 5 BASIC13.62□□□□□ -0.23
SHROOM3Q8TF72 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC13.62□□□□□ -0.23
SHROOM3Q8TF72 CHRNA2-201ENST00000240132 1735 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
SHROOM3Q8TF72 A1CF-204ENST00000373997 2116 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SHROOM3Q8TF72 STK16-202ENST00000409260 1493 ntTSL 5 BASIC13.62□□□□□ -0.23
SHROOM3Q8TF72 ATP5S-203ENST00000358473 801 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SHROOM3Q8TF72 WFDC5-202ENST00000372789 1018 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SHROOM3Q8TF72 VCX3A-202ENST00000398729 808 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
SHROOM3Q8TF72 CFAP36-203ENST00000403007 759 ntTSL 2 BASIC13.62□□□□□ -0.23
SHROOM3Q8TF72 CD37-203ENST00000426897 1204 ntTSL 2 BASIC13.62□□□□□ -0.23
SHROOM3Q8TF72 ATP1A4-205ENST00000470705 886 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SHROOM3Q8TF72 WNT5B-206ENST00000542408 508 ntTSL 3 BASIC13.62□□□□□ -0.23
SHROOM3Q8TF72 AC055811.3-201ENST00000584952 686 ntBASIC13.62□□□□□ -0.23
SHROOM3Q8TF72 AL078590.3-205ENST00000606039 465 ntTSL 5 BASIC13.62□□□□□ -0.23
SHROOM3Q8TF72 AL137793.2-201ENST00000632635 659 ntTSL 3 BASIC13.62□□□□□ -0.23
SHROOM3Q8TF72 KCNJ11-201ENST00000339994 2801 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
SHROOM3Q8TF72 CICP1-201ENST00000416803 2410 ntBASIC13.62□□□□□ -0.23
SHROOM3Q8TF72 AC073862.3-201ENST00000624597 1648 ntBASIC13.62□□□□□ -0.23
SHROOM3Q8TF72 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
SHROOM3Q8TF72 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
SHROOM3Q8TF72 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
SHROOM3Q8TF72 VOPP1-217ENST00000625836 1400 ntTSL 2 BASIC13.62□□□□□ -0.23
SHROOM3Q8TF72 CSTF2-201ENST00000372972 1958 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SHROOM3Q8TF72 SLC23A1-202ENST00000353963 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SHROOM3Q8TF72 DNMT3B-206ENST00000456297 2315 ntTSL 2 BASIC13.62□□□□□ -0.23
SHROOM3Q8TF72 GUCY1B3-204ENST00000505154 2316 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SHROOM3Q8TF72 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC13.62□□□□□ -0.23
SHROOM3Q8TF72 FSTL1-202ENST00000424703 1396 ntTSL 2 BASIC13.62□□□□□ -0.23
SHROOM3Q8TF72 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
SHROOM3Q8TF72 H1FX-AS1-201ENST00000383461 2600 ntTSL 2 BASIC13.62□□□□□ -0.23
SHROOM3Q8TF72 GNPDA1-204ENST00000503794 2622 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SHROOM3Q8TF72 AC138150.2-201ENST00000589796 2053 ntTSL 2 BASIC13.62□□□□□ -0.23
SHROOM3Q8TF72 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SHROOM3Q8TF72 NPAS4-201ENST00000311034 3303 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SHROOM3Q8TF72 STT3A-211ENST00000529196 2402 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SHROOM3Q8TF72 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
SHROOM3Q8TF72 PECR-201ENST00000265322 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SHROOM3Q8TF72 DNAJB13-201ENST00000339764 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SHROOM3Q8TF72 CYFIP2-222ENST00000620254 4124 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SHROOM3Q8TF72 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SHROOM3Q8TF72 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SHROOM3Q8TF72 C20orf96-203ENST00000400269 1608 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
SHROOM3Q8TF72 TNNT3-201ENST00000278317 1210 ntAPPRIS P3 TSL 5 BASIC13.62□□□□□ -0.23
SHROOM3Q8TF72 CST1-201ENST00000304749 760 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SHROOM3Q8TF72 DMTF1-201ENST00000331242 3801 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SHROOM3Q8TF72 TNNT3-207ENST00000381589 1060 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
SHROOM3Q8TF72 RPA3-202ENST00000396682 847 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
SHROOM3Q8TF72 AL513165.1-201ENST00000413915 289 ntTSL 3 BASIC13.62□□□□□ -0.23
SHROOM3Q8TF72 AL512599.1-201ENST00000430724 685 ntBASIC13.62□□□□□ -0.23
SHROOM3Q8TF72 MUSTN1-202ENST00000486659 622 ntTSL 2 BASIC13.62□□□□□ -0.23
SHROOM3Q8TF72 PRDM2-213ENST00000503842 705 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SHROOM3Q8TF72 KIAA1191-210ENST00000510164 1243 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SHROOM3Q8TF72 AC109479.3-201ENST00000520163 360 ntTSL 3 BASIC13.62□□□□□ -0.23
SHROOM3Q8TF72 CHTF8-207ENST00000520529 475 ntTSL 2 BASIC13.62□□□□□ -0.23
SHROOM3Q8TF72 UBR5-AS1-202ENST00000520820 800 ntTSL 2 BASIC13.62□□□□□ -0.23
SHROOM3Q8TF72 RBM4-211ENST00000530235 1011 ntTSL 3 BASIC13.62□□□□□ -0.23
SHROOM3Q8TF72 NFATC2IP-206ENST00000568148 1157 ntTSL 2 BASIC13.62□□□□□ -0.23
SHROOM3Q8TF72 KF455155.1-201ENST00000604493 303 ntBASIC13.62□□□□□ -0.23
SHROOM3Q8TF72 AC006548.2-201ENST00000605217 529 ntBASIC13.62□□□□□ -0.23
SHROOM3Q8TF72 AC123912.6-201ENST00000612657 315 ntBASIC13.62□□□□□ -0.23
SHROOM3Q8TF72 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SHROOM3Q8TF72 ZDHHC8P1-202ENST00000418264 1403 ntBASIC13.61□□□□□ -0.23
SHROOM3Q8TF72 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC13.61□□□□□ -0.23
SHROOM3Q8TF72 ACIN1-204ENST00000397341 2738 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SHROOM3Q8TF72 MAGEC3-205ENST00000544766 1707 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
SHROOM3Q8TF72 CTRL-205ENST00000574481 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SHROOM3Q8TF72 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC13.61□□□□□ -0.23
SHROOM3Q8TF72 SERPINB6-206ENST00000380546 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SHROOM3Q8TF72 CDK5RAP1-203ENST00000357886 2164 ntTSL 5 BASIC13.61□□□□□ -0.23
SHROOM3Q8TF72 LILRB1-202ENST00000396315 2157 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
SHROOM3Q8TF72 FAM214B-205ENST00000488109 2999 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
SHROOM3Q8TF72 GLT6D1-201ENST00000371763 1526 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
SHROOM3Q8TF72 GLT6D1-202ENST00000613244 1523 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
SHROOM3Q8TF72 LINC01624-203ENST00000607074 3265 ntTSL 2 BASIC13.61□□□□□ -0.23
SHROOM3Q8TF72 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
SHROOM3Q8TF72 GULP1-207ENST00000409843 2643 ntAPPRIS ALT1 TSL 2 BASIC13.61□□□□□ -0.23
SHROOM3Q8TF72 AC097376.2-205ENST00000610159 5334 ntBASIC13.61□□□□□ -0.23
SHROOM3Q8TF72 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms