Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 HTR5A-201ENST00000287907 2912 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SHKBP1Q8TBC3 ARAF-201ENST00000290277 2504 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SHKBP1Q8TBC3 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
SHKBP1Q8TBC3 CDK5RAP1-202ENST00000346416 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SHKBP1Q8TBC3 ADCY4-202ENST00000418030 3353 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SHKBP1Q8TBC3 DYNC1I1-201ENST00000324972 2950 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
SHKBP1Q8TBC3 CCER1-201ENST00000358859 2962 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
SHKBP1Q8TBC3 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
SHKBP1Q8TBC3 MEST-206ENST00000416162 2158 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SHKBP1Q8TBC3 SGMS1-203ENST00000429490 3634 ntTSL 5 BASIC14.09□□□□□ -0.15
SHKBP1Q8TBC3 MYADM-201ENST00000336967 3047 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
SHKBP1Q8TBC3 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SHKBP1Q8TBC3 PTPN1-202ENST00000541713 3469 ntTSL 2 BASIC14.09□□□□□ -0.15
SHKBP1Q8TBC3 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
SHKBP1Q8TBC3 H3F3B-201ENST00000254810 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
SHKBP1Q8TBC3 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
SHKBP1Q8TBC3 NNMT-203ENST00000535401 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SHKBP1Q8TBC3 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SHKBP1Q8TBC3 RS1-201ENST00000379984 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SHKBP1Q8TBC3 AC093899.2-201ENST00000513963 1935 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
SHKBP1Q8TBC3 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
SHKBP1Q8TBC3 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SHKBP1Q8TBC3 HSD3BP1-201ENST00000286193 1111 ntBASIC14.08□□□□□ -0.16
SHKBP1Q8TBC3 TRPM3-205ENST00000361823 1260 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SHKBP1Q8TBC3 TREM2-202ENST00000373113 1044 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
SHKBP1Q8TBC3 CPSF4L-202ENST00000397671 1275 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
SHKBP1Q8TBC3 KRT18P33-201ENST00000398525 1043 ntBASIC14.08□□□□□ -0.16
SHKBP1Q8TBC3 SAPCD1-AS1-202ENST00000419679 461 ntTSL 3 BASIC14.08□□□□□ -0.16
SHKBP1Q8TBC3 SOD2-205ENST00000444946 917 ntTSL 2 BASIC14.08□□□□□ -0.16
SHKBP1Q8TBC3 HIST1H2APS2-201ENST00000454426 370 ntBASIC14.08□□□□□ -0.16
SHKBP1Q8TBC3 IGHVII-74-1-201ENST00000517572 241 ntBASIC14.08□□□□□ -0.16
SHKBP1Q8TBC3 SRP14-208ENST00000560773 468 ntTSL 3 BASIC14.08□□□□□ -0.16
SHKBP1Q8TBC3 FBXO36P1-201ENST00000579006 471 ntBASIC14.08□□□□□ -0.16
SHKBP1Q8TBC3 AC103808.3-201ENST00000579714 598 ntTSL 5 BASIC14.08□□□□□ -0.16
SHKBP1Q8TBC3 MIR4254-201ENST00000581063 76 ntBASIC14.08□□□□□ -0.16
SHKBP1Q8TBC3 TNFRSF10A-204ENST00000613472 978 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SHKBP1Q8TBC3 AC020917.4-201ENST00000623994 1999 ntBASIC14.08□□□□□ -0.16
SHKBP1Q8TBC3 MRPS9-201ENST00000258455 1500 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SHKBP1Q8TBC3 F10-201ENST00000375551 1509 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SHKBP1Q8TBC3 ECI2-207ENST00000465828 1548 ntTSL 5 BASIC14.08□□□□□ -0.16
SHKBP1Q8TBC3 PTPRH-202ENST00000376350 3877 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
SHKBP1Q8TBC3 SPDYA-202ENST00000379579 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SHKBP1Q8TBC3 ATG5-202ENST00000360666 2712 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SHKBP1Q8TBC3 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SHKBP1Q8TBC3 OS9-201ENST00000257966 2505 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
SHKBP1Q8TBC3 CALB1-201ENST00000265431 2533 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SHKBP1Q8TBC3 FAM227B-212ENST00000561064 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
SHKBP1Q8TBC3 RIN2-202ENST00000440354 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
SHKBP1Q8TBC3 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SHKBP1Q8TBC3 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SHKBP1Q8TBC3 STAT4-202ENST00000392320 2822 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SHKBP1Q8TBC3 DCAF10-202ENST00000377724 3862 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SHKBP1Q8TBC3 SIGLEC6-204ENST00000391797 1391 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SHKBP1Q8TBC3 CNOT7-211ENST00000523917 1885 ntTSL 2 BASIC14.08□□□□□ -0.16
SHKBP1Q8TBC3 STX3-207ENST00000633708 3111 ntTSL 5 BASIC14.08□□□□□ -0.16
SHKBP1Q8TBC3 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
SHKBP1Q8TBC3 ABR-205ENST00000544583 5595 ntTSL 2 BASIC14.07□□□□□ -0.16
SHKBP1Q8TBC3 DNAJB8-201ENST00000319153 2465 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SHKBP1Q8TBC3 FAM230C-201ENST00000623511 1970 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SHKBP1Q8TBC3 COLQ-202ENST00000383786 1482 ntTSL 5 BASIC14.07□□□□□ -0.16
SHKBP1Q8TBC3 NRROS-201ENST00000328557 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SHKBP1Q8TBC3 PEG10-205ENST00000612748 2585 ntAPPRIS P5 TSL 5 BASIC14.07□□□□□ -0.16
SHKBP1Q8TBC3 AC018904.2-201ENST00000561202 1757 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SHKBP1Q8TBC3 GOLGA8N-205ENST00000569659 1791 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
SHKBP1Q8TBC3 C19orf44-203ENST00000594035 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
SHKBP1Q8TBC3 SECISBP2-202ENST00000375807 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SHKBP1Q8TBC3 MDM1-201ENST00000303145 2918 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
SHKBP1Q8TBC3 EFHB-202ENST00000344838 2389 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
SHKBP1Q8TBC3 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
SHKBP1Q8TBC3 LINC00484-201ENST00000414768 561 ntTSL 5 BASIC14.07□□□□□ -0.16
SHKBP1Q8TBC3 KRT8P30-201ENST00000432100 650 ntBASIC14.07□□□□□ -0.16
SHKBP1Q8TBC3 AC023906.1-201ENST00000486386 453 ntBASIC14.07□□□□□ -0.16
SHKBP1Q8TBC3 AF111169.2-201ENST00000553758 721 ntTSL 3 BASIC14.07□□□□□ -0.16
SHKBP1Q8TBC3 AL136295.3-201ENST00000558325 850 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
SHKBP1Q8TBC3 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SHKBP1Q8TBC3 GPATCH2L-202ENST00000312858 2438 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
SHKBP1Q8TBC3 ZNF341-202ENST00000375200 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
SHKBP1Q8TBC3 CLCN7-203ENST00000448525 4151 ntTSL 2 BASIC14.07□□□□□ -0.16
SHKBP1Q8TBC3 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
SHKBP1Q8TBC3 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC14.07□□□□□ -0.16
SHKBP1Q8TBC3 PPHLN1-206ENST00000395580 1693 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
SHKBP1Q8TBC3 CTBP1-AS-201ENST00000625256 3886 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SHKBP1Q8TBC3 SIGLEC6-201ENST00000343300 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
SHKBP1Q8TBC3 ARMC7-201ENST00000245543 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SHKBP1Q8TBC3 PSMC5-212ENST00000581882 1474 ntTSL 5 BASIC14.06□□□□□ -0.16
SHKBP1Q8TBC3 CXorf40A-212ENST00000514208 1840 ntAPPRIS ALT1 TSL 5 BASIC14.06□□□□□ -0.16
SHKBP1Q8TBC3 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
SHKBP1Q8TBC3 MKRN1-201ENST00000255977 3151 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
SHKBP1Q8TBC3 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SHKBP1Q8TBC3 CAMKV-201ENST00000296471 2913 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SHKBP1Q8TBC3 ALPP-201ENST00000392027 2971 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SHKBP1Q8TBC3 MIEF2-201ENST00000323019 3364 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
SHKBP1Q8TBC3 MYRIP-204ENST00000444716 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SHKBP1Q8TBC3 MALL-201ENST00000272462 3061 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SHKBP1Q8TBC3 COG1-201ENST00000299886 3079 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SHKBP1Q8TBC3 RAB37-205ENST00000392614 2704 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
SHKBP1Q8TBC3 SNORA57-201ENST00000383870 149 ntBASIC14.06□□□□□ -0.16
SHKBP1Q8TBC3 PRAME-206ENST00000406503 740 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
SHKBP1Q8TBC3 AC004522.1-201ENST00000419978 654 ntBASIC14.06□□□□□ -0.16
SHKBP1Q8TBC3 RIC3-205ENST00000425599 867 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 68.6 ms