Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 RBM33-203ENST00000341148 7058 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
CLK1P49759 FER1L5-204ENST00000623019 6477 ntAPPRIS ALT2 BASIC12.77□□□□□ -0.37
CLK1P49759 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC12.77□□□□□ -0.37
CLK1P49759 ATXN2-226ENST00000608853 4376 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
CLK1P49759 LAMA4-207ENST00000424408 5983 ntAPPRIS P3 TSL 5 BASIC12.77□□□□□ -0.37
CLK1P49759 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
CLK1P49759 ARFIP2-210ENST00000614314 3846 ntTSL 2 BASIC12.77□□□□□ -0.37
CLK1P49759 RNF170-206ENST00000527424 3880 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CLK1P49759 RBM10-202ENST00000345781 3108 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
CLK1P49759 DDAH1-201ENST00000284031 3920 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CLK1P49759 ZNF701-204ENST00000540331 5538 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
CLK1P49759 UGGT2-203ENST00000376747 4832 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CLK1P49759 PPIL2-201ENST00000335025 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CLK1P49759 SIGLEC1-201ENST00000344754 6720 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CLK1P49759 ELN-204ENST00000357036 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
CLK1P49759 LINC00343-203ENST00000454555 1765 ntTSL 2 BASIC12.76□□□□□ -0.37
CLK1P49759 EPN3-201ENST00000268933 4071 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
CLK1P49759 RC3H2-201ENST00000335387 3081 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CLK1P49759 SH2D3C-202ENST00000373276 3051 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CLK1P49759 CSTF2-203ENST00000415585 2074 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CLK1P49759 PIGO-202ENST00000361778 2464 ntTSL 5 BASIC12.76□□□□□ -0.37
CLK1P49759 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CLK1P49759 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CLK1P49759 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC12.76□□□□□ -0.37
CLK1P49759 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC12.76□□□□□ -0.37
CLK1P49759 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
CLK1P49759 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC12.76□□□□□ -0.37
CLK1P49759 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
CLK1P49759 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC12.76□□□□□ -0.37
CLK1P49759 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC12.76□□□□□ -0.37
CLK1P49759 DEF8-202ENST00000418391 852 ntTSL 2 BASIC12.76□□□□□ -0.37
CLK1P49759 KRTAP19-9P-201ENST00000421795 191 ntBASIC12.76□□□□□ -0.37
CLK1P49759 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC12.76□□□□□ -0.37
CLK1P49759 Z97180.1-201ENST00000445173 988 ntBASIC12.76□□□□□ -0.37
CLK1P49759 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CLK1P49759 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC12.76□□□□□ -0.37
CLK1P49759 REEP1-202ENST00000453231 940 ntTSL 2 BASIC12.76□□□□□ -0.37
CLK1P49759 AC099548.2-209ENST00000480264 625 ntBASIC12.76□□□□□ -0.37
CLK1P49759 AC114947.1-202ENST00000514136 344 ntBASIC12.76□□□□□ -0.37
CLK1P49759 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CLK1P49759 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC12.76□□□□□ -0.37
CLK1P49759 AC115099.1-201ENST00000570413 362 ntTSL 3 BASIC12.76□□□□□ -0.37
CLK1P49759 MIR6787-201ENST00000616675 61 ntBASIC12.76□□□□□ -0.37
CLK1P49759 SEPT9-207ENST00000449803 3996 ntTSL 2 BASIC12.76□□□□□ -0.37
CLK1P49759 TUBB4AP1-201ENST00000450755 1325 ntBASIC12.76□□□□□ -0.37
CLK1P49759 PAX8-205ENST00000429538 4084 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CLK1P49759 GJB5-201ENST00000338513 1355 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CLK1P49759 BX537318.2-201ENST00000624893 4162 ntBASIC12.76□□□□□ -0.37
CLK1P49759 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
CLK1P49759 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC12.76□□□□□ -0.37
CLK1P49759 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CLK1P49759 ANAPC7-203ENST00000455511 3045 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
CLK1P49759 METTL7B-201ENST00000394252 1506 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
CLK1P49759 RAP1GAP2-201ENST00000254695 6661 ntAPPRIS P4 TSL 1 (best) BASIC12.76□□□□□ -0.37
CLK1P49759 PLEKHM1P1-205ENST00000582986 5014 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CLK1P49759 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
CLK1P49759 NAPB-201ENST00000377026 3837 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
CLK1P49759 ROBO2-209ENST00000487694 5919 ntTSL 5 BASIC12.76□□□□□ -0.37
CLK1P49759 HDAC8-207ENST00000373573 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CLK1P49759 DDX5-210ENST00000578804 2021 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CLK1P49759 SLC25A35-203ENST00000579192 2136 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CLK1P49759 EXOC5-202ENST00000413566 8513 ntTSL 5 BASIC12.76□□□□□ -0.37
CLK1P49759 WDR92-201ENST00000295121 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CLK1P49759 VENTX-201ENST00000325980 2911 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CLK1P49759 BANK1-202ENST00000428908 3044 ntTSL 5 BASIC12.75□□□□□ -0.37
CLK1P49759 NOP2-212ENST00000541778 3038 ntTSL 2 BASIC12.75□□□□□ -0.37
CLK1P49759 HK3-201ENST00000292432 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CLK1P49759 DPP8-201ENST00000300141 3139 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CLK1P49759 TAOK2-201ENST00000279394 4246 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CLK1P49759 MYBPC3-204ENST00000545968 4226 ntAPPRIS P2 TSL 5 BASIC12.75□□□□□ -0.37
CLK1P49759 ERP44-201ENST00000262455 4854 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CLK1P49759 CPPED1-202ENST00000381774 6273 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CLK1P49759 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CLK1P49759 RAB15-201ENST00000267512 3391 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CLK1P49759 IP6K3-201ENST00000293756 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CLK1P49759 PHYHIP-201ENST00000321613 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CLK1P49759 KRT17P5-201ENST00000332088 839 ntBASIC12.75□□□□□ -0.37
CLK1P49759 ENG-201ENST00000344849 3059 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
CLK1P49759 HIST2H2BE-201ENST00000369155 2194 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
CLK1P49759 HLA-E-201ENST00000376630 2601 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
CLK1P49759 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC12.75□□□□□ -0.37
CLK1P49759 SLC35B4-201ENST00000378509 6797 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CLK1P49759 SRRM2-AS1-201ENST00000382313 3523 ntTSL 2 BASIC12.75□□□□□ -0.37
CLK1P49759 ZNF573-204ENST00000392138 2266 ntTSL 2 BASIC12.75□□□□□ -0.37
CLK1P49759 KLHL23-202ENST00000392647 4077 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CLK1P49759 ERLIN1-202ENST00000407654 1453 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CLK1P49759 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC12.75□□□□□ -0.37
CLK1P49759 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
CLK1P49759 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC12.75□□□□□ -0.37
CLK1P49759 SALL4P6-201ENST00000429385 1691 ntBASIC12.75□□□□□ -0.37
CLK1P49759 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC12.75□□□□□ -0.37
CLK1P49759 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC12.75□□□□□ -0.37
CLK1P49759 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC12.75□□□□□ -0.37
CLK1P49759 KLHL24-211ENST00000476808 2126 ntTSL 2 BASIC12.75□□□□□ -0.37
CLK1P49759 AL033529.1-201ENST00000480336 3447 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
CLK1P49759 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC12.75□□□□□ -0.37
CLK1P49759 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC12.75□□□□□ -0.37
CLK1P49759 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC12.75□□□□□ -0.37
CLK1P49759 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC12.75□□□□□ -0.37
CLK1P49759 ELP5-212ENST00000574255 671 ntTSL 2 BASIC12.75□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 62.9 ms