Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 FAM200A-202ENST00000449309 2480 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
APOC1P02654 ERG-211ENST00000453032 1595 ntTSL 2 BASIC12.01□□□□□ -0.49
APOC1P02654 HECW2-202ENST00000409111 6692 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
APOC1P02654 DTX1-201ENST00000257600 3455 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
APOC1P02654 ALG8-202ENST00000376156 1677 ntTSL 2 BASIC12.01□□□□□ -0.49
APOC1P02654 PRPSAP1-206ENST00000446526 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
APOC1P02654 LINC01973-201ENST00000374983 4678 ntTSL 2 BASIC12.01□□□□□ -0.49
APOC1P02654 MYO1G-201ENST00000258787 3267 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
APOC1P02654 DAO-201ENST00000228476 1756 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
APOC1P02654 LINC01002-209ENST00000631858 1761 ntTSL 2 BASIC12.01□□□□□ -0.49
APOC1P02654 TUBGCP2-210ENST00000543663 4302 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
APOC1P02654 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
APOC1P02654 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
APOC1P02654 OR2W2P-201ENST00000406313 909 ntBASIC12.01□□□□□ -0.49
APOC1P02654 SSR4P1-201ENST00000415143 412 ntBASIC12.01□□□□□ -0.49
APOC1P02654 MOCS1-207ENST00000432280 1071 ntTSL 5 BASIC12.01□□□□□ -0.49
APOC1P02654 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC12.01□□□□□ -0.49
APOC1P02654 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC12.01□□□□□ -0.49
APOC1P02654 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
APOC1P02654 AL355376.1-201ENST00000456082 517 ntTSL 3 BASIC12.01□□□□□ -0.49
APOC1P02654 AKR7A2P1-201ENST00000460134 915 ntBASIC12.01□□□□□ -0.49
APOC1P02654 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC12.01□□□□□ -0.49
APOC1P02654 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC12.01□□□□□ -0.49
APOC1P02654 SDHD-202ENST00000525291 790 ntTSL 3 BASIC12.01□□□□□ -0.49
APOC1P02654 EMC4-209ENST00000559421 497 ntTSL 2 BASIC12.01□□□□□ -0.49
APOC1P02654 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC12.01□□□□□ -0.49
APOC1P02654 STUB1-204ENST00000564370 875 ntTSL 2 BASIC12.01□□□□□ -0.49
APOC1P02654 RN7SL774P-201ENST00000577467 290 ntBASIC12.01□□□□□ -0.49
APOC1P02654 NAT9-211ENST00000580632 799 ntTSL 3 BASIC12.01□□□□□ -0.49
APOC1P02654 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC12.01□□□□□ -0.49
APOC1P02654 AC008982.2-201ENST00000600473 493 ntTSL 5 BASIC12.01□□□□□ -0.49
APOC1P02654 AC012087.1-201ENST00000608068 809 ntTSL 5 BASIC12.01□□□□□ -0.49
APOC1P02654 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC12.01□□□□□ -0.49
APOC1P02654 HPX-213ENST00000615166 826 ntTSL 5 BASIC12.01□□□□□ -0.49
APOC1P02654 MYO7A-201ENST00000409619 7106 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
APOC1P02654 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
APOC1P02654 LIN54-201ENST00000340417 6127 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
APOC1P02654 GOLGA8A-201ENST00000359187 1877 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
APOC1P02654 DRG2-202ENST00000395726 1897 ntTSL 5 BASIC12.01□□□□□ -0.49
APOC1P02654 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
APOC1P02654 PLA2G4B-201ENST00000452633 2985 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
APOC1P02654 AC125807.2-201ENST00000513358 3514 ntBASIC12.01□□□□□ -0.49
APOC1P02654 OS9-203ENST00000389142 2457 ntTSL 5 BASIC12.01□□□□□ -0.49
APOC1P02654 SLC5A11-211ENST00000569071 1919 ntTSL 5 BASIC12.01□□□□□ -0.49
APOC1P02654 IKBKE-201ENST00000578328 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
APOC1P02654 VSTM4-202ENST00000332853 6392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
APOC1P02654 SCAF4-201ENST00000286835 4193 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
APOC1P02654 CHMP5-202ENST00000419016 1957 ntTSL 2 BASIC12.01□□□□□ -0.49
APOC1P02654 UGGT2-203ENST00000376747 4832 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
APOC1P02654 C16orf62-215ENST00000542263 3138 ntTSL 2 BASIC12.01□□□□□ -0.49
APOC1P02654 TMPRSS13-205ENST00000526090 2592 ntTSL 2 BASIC12.01□□□□□ -0.49
APOC1P02654 CACNA1F-203ENST00000376265 6070 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
APOC1P02654 AHI1-205ENST00000457866 5549 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
APOC1P02654 NRAP-201ENST00000359988 5580 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
APOC1P02654 IL19-201ENST00000270218 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
APOC1P02654 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC12.01□□□□□ -0.49
APOC1P02654 AC115284.2-201ENST00000624646 2054 ntBASIC12.01□□□□□ -0.49
APOC1P02654 CCNE2-201ENST00000308108 2724 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
APOC1P02654 ASB2-201ENST00000315988 2743 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
APOC1P02654 IMMT-212ENST00000620815 1520 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
APOC1P02654 TMPRSS13-201ENST00000430170 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
APOC1P02654 RGS3-205ENST00000374134 2862 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
APOC1P02654 NCF4-202ENST00000397147 1641 ntTSL 1 (best) BASIC12□□□□□ -0.49
APOC1P02654 ICOSLG-202ENST00000400377 2907 ntTSL 2 BASIC12□□□□□ -0.49
APOC1P02654 ZFYVE19-215ENST00000570108 1669 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
APOC1P02654 CPN2-201ENST00000323830 3028 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
APOC1P02654 PDE2A-218ENST00000540345 3027 ntTSL 1 (best) BASIC12□□□□□ -0.49
APOC1P02654 SLC39A6-204ENST00000590986 3003 ntAPPRIS P3 TSL 5 BASIC12□□□□□ -0.49
APOC1P02654 DPAGT1-217ENST00000639704 1719 ntTSL 5 BASIC12□□□□□ -0.49
APOC1P02654 RBM15-204ENST00000617047 3284 ntTSL 1 (best) BASIC12□□□□□ -0.49
APOC1P02654 ZNF277-201ENST00000361822 1849 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
APOC1P02654 MUC1-225ENST00000612778 1836 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
APOC1P02654 UBTF-209ENST00000529383 2570 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
APOC1P02654 HARS-207ENST00000504156 3334 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
APOC1P02654 MAT2B-204ENST00000518095 3409 ntTSL 1 (best) BASIC12□□□□□ -0.49
APOC1P02654 EMBP1-203ENST00000622787 4235 ntTSL 2 BASIC12□□□□□ -0.49
APOC1P02654 B3GAT1-202ENST00000392580 3522 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
APOC1P02654 PPP4R3B-206ENST00000616407 4385 ntTSL 1 (best) BASIC12□□□□□ -0.49
APOC1P02654 DANT2-201ENST00000430756 2079 ntTSL 3 BASIC12□□□□□ -0.49
APOC1P02654 SDCCAG3P2-201ENST00000326105 1023 ntBASIC12□□□□□ -0.49
APOC1P02654 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
APOC1P02654 GGTLC4P-201ENST00000402176 664 ntBASIC12□□□□□ -0.49
APOC1P02654 AL391839.2-201ENST00000412085 383 ntTSL 5 BASIC12□□□□□ -0.49
APOC1P02654 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC12□□□□□ -0.49
APOC1P02654 GRPEL2P1-201ENST00000453145 339 ntBASIC12□□□□□ -0.49
APOC1P02654 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC12□□□□□ -0.49
APOC1P02654 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
APOC1P02654 RN7SL767P-201ENST00000493013 295 ntBASIC12□□□□□ -0.49
APOC1P02654 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC12□□□□□ -0.49
APOC1P02654 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
APOC1P02654 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC12□□□□□ -0.49
APOC1P02654 ALG10B-203ENST00000551464 571 ntTSL 3 BASIC12□□□□□ -0.49
APOC1P02654 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC12□□□□□ -0.49
APOC1P02654 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC12□□□□□ -0.49
APOC1P02654 AP005264.5-201ENST00000590066 467 ntBASIC12□□□□□ -0.49
APOC1P02654 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC12□□□□□ -0.49
APOC1P02654 AC012073.1-201ENST00000606114 1108 ntBASIC12□□□□□ -0.49
APOC1P02654 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC12□□□□□ -0.49
APOC1P02654 MEG3_2.1-201ENST00000611456 105 ntBASIC12□□□□□ -0.49
APOC1P02654 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC12□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms