Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 PJA1-203ENST00000374583 2692 ntAPPRIS P4 BASIC14.11□□□□□ -0.15
SHKBP1Q8TBC3 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
SHKBP1Q8TBC3 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SHKBP1Q8TBC3 STK16-202ENST00000409260 1493 ntTSL 5 BASIC14.11□□□□□ -0.15
SHKBP1Q8TBC3 AOC1-204ENST00000467291 2857 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
SHKBP1Q8TBC3 MPRIP-202ENST00000341712 3846 ntAPPRIS P3 TSL 5 BASIC14.11□□□□□ -0.15
SHKBP1Q8TBC3 AAR2-201ENST00000320849 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SHKBP1Q8TBC3 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
SHKBP1Q8TBC3 AC105345.1-202ENST00000382488 3204 ntTSL 2 BASIC14.11□□□□□ -0.15
SHKBP1Q8TBC3 MTF2-202ENST00000370303 1951 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SHKBP1Q8TBC3 LSM14A-203ENST00000544216 3596 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
SHKBP1Q8TBC3 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC14.11□□□□□ -0.15
SHKBP1Q8TBC3 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SHKBP1Q8TBC3 SLC26A6-202ENST00000337000 2317 ntTSL 2 BASIC14.1□□□□□ -0.15
SHKBP1Q8TBC3 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
SHKBP1Q8TBC3 LIMK1-208ENST00000538333 2170 ntTSL 2 BASIC14.1□□□□□ -0.15
SHKBP1Q8TBC3 HNRNPC-205ENST00000553300 1375 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
SHKBP1Q8TBC3 RAB15-201ENST00000267512 3391 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SHKBP1Q8TBC3 RBM15-203ENST00000602849 3368 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
SHKBP1Q8TBC3 ADRA2B-201ENST00000620793 3371 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
SHKBP1Q8TBC3 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC14.1□□□□□ -0.15
SHKBP1Q8TBC3 CREB3L4-204ENST00000368603 1557 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
SHKBP1Q8TBC3 TRAF3IP3-204ENST00000367026 2058 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SHKBP1Q8TBC3 MIER1-202ENST00000355977 3595 ntTSL 5 BASIC14.1□□□□□ -0.15
SHKBP1Q8TBC3 ZSCAN21-203ENST00000456748 1904 ntTSL 5 BASIC14.1□□□□□ -0.15
SHKBP1Q8TBC3 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SHKBP1Q8TBC3 CD300LB-202ENST00000392621 2286 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
SHKBP1Q8TBC3 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SHKBP1Q8TBC3 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC14.1□□□□□ -0.15
SHKBP1Q8TBC3 CD99L2-205ENST00000437787 3493 ntTSL 2 BASIC14.1□□□□□ -0.15
SHKBP1Q8TBC3 AIG1-203ENST00000367596 559 ntTSL 2 BASIC14.1□□□□□ -0.15
SHKBP1Q8TBC3 CELA3A-202ENST00000374663 649 ntTSL 2 BASIC14.1□□□□□ -0.15
SHKBP1Q8TBC3 KRTAP2-3-201ENST00000391418 875 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
SHKBP1Q8TBC3 KCNE1-202ENST00000399284 666 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
SHKBP1Q8TBC3 MARK2-205ENST00000408948 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
SHKBP1Q8TBC3 PPIL3-205ENST00000409449 756 ntTSL 5 BASIC14.1□□□□□ -0.15
SHKBP1Q8TBC3 SNHG14-201ENST00000414175 610 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SHKBP1Q8TBC3 LINC00339-202ENST00000416769 1077 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SHKBP1Q8TBC3 AL021391.1-201ENST00000454439 545 ntTSL 4 BASIC14.1□□□□□ -0.15
SHKBP1Q8TBC3 SNORA47-201ENST00000458862 138 ntBASIC14.1□□□□□ -0.15
SHKBP1Q8TBC3 RPL29P2-201ENST00000488409 460 ntBASIC14.1□□□□□ -0.15
SHKBP1Q8TBC3 DUT-207ENST00000559416 635 ntTSL 2 BASIC14.1□□□□□ -0.15
SHKBP1Q8TBC3 ANAPC11-206ENST00000571874 636 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
SHKBP1Q8TBC3 LINC00514-203ENST00000573465 313 ntTSL 5 BASIC14.1□□□□□ -0.15
SHKBP1Q8TBC3 AIPL1-210ENST00000576307 1077 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SHKBP1Q8TBC3 SEPT4-AS1-203ENST00000580769 1000 ntTSL 3 BASIC14.1□□□□□ -0.15
SHKBP1Q8TBC3 AC006116.2-201ENST00000589958 988 ntBASIC14.1□□□□□ -0.15
SHKBP1Q8TBC3 PTOV1-AS2-203ENST00000601893 719 ntTSL 4 BASIC14.1□□□□□ -0.15
SHKBP1Q8TBC3 PLS3-210ENST00000626746 216 ntTSL 4 BASIC14.1□□□□□ -0.15
SHKBP1Q8TBC3 CNGB1-202ENST00000311183 1633 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SHKBP1Q8TBC3 PNMA5-205ENST00000535214 3198 ntAPPRIS P2 TSL 3 BASIC14.1□□□□□ -0.15
SHKBP1Q8TBC3 CADM1-204ENST00000536727 3520 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SHKBP1Q8TBC3 MEG8-221ENST00000636391 2155 ntTSL 5 BASIC14.1□□□□□ -0.15
SHKBP1Q8TBC3 ZMYND10-201ENST00000231749 2896 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
SHKBP1Q8TBC3 TTN-AS1-264ENST00000627564 1319 ntTSL 5 BASIC14.1□□□□□ -0.15
SHKBP1Q8TBC3 SFI1-208ENST00000432498 4162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
SHKBP1Q8TBC3 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC14.1□□□□□ -0.15
SHKBP1Q8TBC3 AC067750.1-201ENST00000608826 6545 ntBASIC14.1□□□□□ -0.15
SHKBP1Q8TBC3 TUBGCP4-201ENST00000260383 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SHKBP1Q8TBC3 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
SHKBP1Q8TBC3 ABCF3-201ENST00000292808 2453 ntAPPRIS ALT1 TSL 2 BASIC14.09□□□□□ -0.15
SHKBP1Q8TBC3 IFT81-202ENST00000361948 3048 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SHKBP1Q8TBC3 AC102953.2-201ENST00000609755 3026 ntBASIC14.09□□□□□ -0.15
SHKBP1Q8TBC3 SEZ6L-201ENST00000248933 3248 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
SHKBP1Q8TBC3 SEZ6L-210ENST00000629590 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
SHKBP1Q8TBC3 MCPH1-AS1-201ENST00000515608 2147 ntTSL 5 BASIC14.09□□□□□ -0.15
SHKBP1Q8TBC3 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SHKBP1Q8TBC3 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SHKBP1Q8TBC3 AADACL4-201ENST00000376221 1575 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
SHKBP1Q8TBC3 DMC1-207ENST00000616615 1595 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SHKBP1Q8TBC3 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SHKBP1Q8TBC3 AC139795.2-201ENST00000499900 1751 ntTSL 2 BASIC14.09□□□□□ -0.15
SHKBP1Q8TBC3 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SHKBP1Q8TBC3 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SHKBP1Q8TBC3 TMEM78-201ENST00000323223 2175 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
SHKBP1Q8TBC3 PRPF40B-209ENST00000548825 3307 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
SHKBP1Q8TBC3 AC111188.1-201ENST00000525758 1833 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SHKBP1Q8TBC3 LRRC17-201ENST00000249377 2002 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SHKBP1Q8TBC3 ALPL-206ENST00000539907 2241 ntTSL 2 BASIC14.09□□□□□ -0.15
SHKBP1Q8TBC3 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SHKBP1Q8TBC3 ACO1-203ENST00000541043 3618 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
SHKBP1Q8TBC3 HAX1-201ENST00000328703 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SHKBP1Q8TBC3 VASH2-205ENST00000366967 1206 ntTSL 2 BASIC14.09□□□□□ -0.15
SHKBP1Q8TBC3 MRPL18-201ENST00000367034 978 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SHKBP1Q8TBC3 BPIFA4P-201ENST00000375465 1203 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SHKBP1Q8TBC3 REG3G-202ENST00000393897 856 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SHKBP1Q8TBC3 HNRNPA1P10-201ENST00000444945 962 ntBASIC14.09□□□□□ -0.15
SHKBP1Q8TBC3 MTHFD2P7-201ENST00000483867 983 ntBASIC14.09□□□□□ -0.15
SHKBP1Q8TBC3 RPSAP70-201ENST00000504462 864 ntBASIC14.09□□□□□ -0.15
SHKBP1Q8TBC3 AC137579.2-201ENST00000517714 551 ntTSL 4 BASIC14.09□□□□□ -0.15
SHKBP1Q8TBC3 AP003351.1-201ENST00000522743 668 ntTSL 3 BASIC14.09□□□□□ -0.15
SHKBP1Q8TBC3 LINC02376-201ENST00000536330 724 ntTSL 3 BASIC14.09□□□□□ -0.15
SHKBP1Q8TBC3 AP003071.1-201ENST00000567925 622 ntTSL 3 BASIC14.09□□□□□ -0.15
SHKBP1Q8TBC3 AC007998.2-201ENST00000589258 455 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
SHKBP1Q8TBC3 ZNF850-201ENST00000589390 523 ntTSL 3 BASIC14.09□□□□□ -0.15
SHKBP1Q8TBC3 AC003070.1-201ENST00000592389 457 ntTSL 2 BASIC14.09□□□□□ -0.15
SHKBP1Q8TBC3 LINC02498-201ENST00000635390 1065 ntTSL 5 BASIC14.09□□□□□ -0.15
SHKBP1Q8TBC3 AMIGO3-201ENST00000320431 2862 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
SHKBP1Q8TBC3 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SHKBP1Q8TBC3 BRPF1-205ENST00000433861 4304 ntTSL 2 BASIC14.09□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 81.3 ms