Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 ITGAL-203ENST00000433423 1416 ntTSL 2 BASIC14.28□□□□□ -0.12
LMO3Q8TAP4 POLD1-201ENST00000440232 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LMO3Q8TAP4 CPSF4-206ENST00000441580 942 ntTSL 2 BASIC14.28□□□□□ -0.12
LMO3Q8TAP4 HNRNPLL-209ENST00000449105 4173 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LMO3Q8TAP4 CU639417.1-201ENST00000464664 460 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
LMO3Q8TAP4 AC008026.2-201ENST00000495438 348 ntBASIC14.28□□□□□ -0.12
LMO3Q8TAP4 TACC1-208ENST00000520340 1976 ntTSL 5 BASIC14.28□□□□□ -0.12
LMO3Q8TAP4 ZFP37-203ENST00000555206 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
LMO3Q8TAP4 APOPT1-215ENST00000556253 783 ntTSL 3 BASIC14.28□□□□□ -0.12
LMO3Q8TAP4 HACD3-207ENST00000566074 1658 ntTSL 5 BASIC14.28□□□□□ -0.12
LMO3Q8TAP4 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
LMO3Q8TAP4 AC109597.2-201ENST00000569407 927 ntTSL 3 BASIC14.28□□□□□ -0.12
LMO3Q8TAP4 AC006435.2-201ENST00000574290 846 ntTSL 5 BASIC14.28□□□□□ -0.12
LMO3Q8TAP4 MIR4706-201ENST00000582134 82 ntBASIC14.28□□□□□ -0.12
LMO3Q8TAP4 ACTBP9-201ENST00000587663 1099 ntBASIC14.28□□□□□ -0.12
LMO3Q8TAP4 VRK3-209ENST00000594948 1847 ntAPPRIS P3 TSL 2 BASIC14.28□□□□□ -0.12
LMO3Q8TAP4 H2BFS-201ENST00000599962 460 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
LMO3Q8TAP4 AL606495.2-201ENST00000605867 535 ntBASIC14.28□□□□□ -0.12
LMO3Q8TAP4 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LMO3Q8TAP4 Metazoa_SRP.200-201ENST00000622073 282 ntBASIC14.28□□□□□ -0.12
LMO3Q8TAP4 TMEM57-201ENST00000374343 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LMO3Q8TAP4 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
LMO3Q8TAP4 KAZN-205ENST00000400798 3643 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
LMO3Q8TAP4 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LMO3Q8TAP4 TBC1D22B-201ENST00000373491 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
LMO3Q8TAP4 C9orf106-201ENST00000316786 3145 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
LMO3Q8TAP4 AP001046.1-201ENST00000435702 2816 ntTSL 2 BASIC14.28□□□□□ -0.12
LMO3Q8TAP4 TOMM40L-209ENST00000545897 2807 ntTSL 2 BASIC14.28□□□□□ -0.12
LMO3Q8TAP4 GUCY1B3-207ENST00000513437 2355 ntTSL 2 BASIC14.27□□□□□ -0.12
LMO3Q8TAP4 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
LMO3Q8TAP4 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC14.27□□□□□ -0.12
LMO3Q8TAP4 AC027369.3-201ENST00000530465 3707 ntBASIC14.27□□□□□ -0.12
LMO3Q8TAP4 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC14.27□□□□□ -0.12
LMO3Q8TAP4 TAF7L-202ENST00000356784 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
LMO3Q8TAP4 DMC1-207ENST00000616615 1595 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
LMO3Q8TAP4 CCDC88C-201ENST00000331194 3104 ntTSL 5 BASIC14.27□□□□□ -0.12
LMO3Q8TAP4 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
LMO3Q8TAP4 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC14.27□□□□□ -0.12
LMO3Q8TAP4 RUBCN-202ENST00000296343 2919 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
LMO3Q8TAP4 HJURP-207ENST00000441687 2934 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.12
LMO3Q8TAP4 AC064850.1-201ENST00000413279 1398 ntBASIC14.27□□□□□ -0.12
LMO3Q8TAP4 R3HDM2-215ENST00000634871 4092 ntTSL 5 BASIC14.27□□□□□ -0.12
LMO3Q8TAP4 ZNF799-202ENST00000430385 2583 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
LMO3Q8TAP4 TNNI2-201ENST00000252898 678 ntAPPRIS P3 TSL 3 BASIC14.27□□□□□ -0.13
LMO3Q8TAP4 IL9-201ENST00000274520 591 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
LMO3Q8TAP4 AC022080.1-201ENST00000366255 781 ntBASIC14.27□□□□□ -0.13
LMO3Q8TAP4 TNNI2-202ENST00000381905 706 ntAPPRIS ALT1 TSL 3 BASIC14.27□□□□□ -0.13
LMO3Q8TAP4 TNNI2-203ENST00000381906 745 ntAPPRIS P3 TSL 3 BASIC14.27□□□□□ -0.13
LMO3Q8TAP4 TNNI2-204ENST00000381911 743 ntAPPRIS P3 TSL 2 BASIC14.27□□□□□ -0.13
LMO3Q8TAP4 AP000354.1-201ENST00000396982 456 ntBASIC14.27□□□□□ -0.13
LMO3Q8TAP4 SNORA50D-201ENST00000408059 134 ntBASIC14.27□□□□□ -0.13
LMO3Q8TAP4 SDCBP2P1-201ENST00000416115 614 ntBASIC14.27□□□□□ -0.13
LMO3Q8TAP4 AP000244.1-201ENST00000424582 201 ntBASIC14.27□□□□□ -0.13
LMO3Q8TAP4 AL109767.1-201ENST00000429450 564 ntTSL 4 BASIC14.27□□□□□ -0.13
LMO3Q8TAP4 IGHV3-43-201ENST00000434710 434 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
LMO3Q8TAP4 AC068134.1-201ENST00000441266 481 ntTSL 3 BASIC14.27□□□□□ -0.13
LMO3Q8TAP4 AL121787.1-202ENST00000445838 876 ntTSL 5 BASIC14.27□□□□□ -0.13
LMO3Q8TAP4 FAM138B-202ENST00000446648 1130 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
LMO3Q8TAP4 FAM138C-202ENST00000449442 1126 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
LMO3Q8TAP4 AC092656.1-202ENST00000515843 998 ntTSL 4 BASIC14.27□□□□□ -0.13
LMO3Q8TAP4 DUXAP9-201ENST00000547220 665 ntTSL 3 BASIC14.27□□□□□ -0.13
LMO3Q8TAP4 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC14.27□□□□□ -0.13
LMO3Q8TAP4 SNHG15-205ENST00000580458 710 ntTSL 2 BASIC14.27□□□□□ -0.13
LMO3Q8TAP4 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC14.27□□□□□ -0.13
LMO3Q8TAP4 IRF3-225ENST00000600022 882 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
LMO3Q8TAP4 AL135936.1-201ENST00000617956 998 ntTSL 5 BASIC14.27□□□□□ -0.13
LMO3Q8TAP4 Metazoa_SRP.128-201ENST00000620543 314 ntBASIC14.27□□□□□ -0.13
LMO3Q8TAP4 SNORA50D-202ENST00000627561 132 ntBASIC14.27□□□□□ -0.13
LMO3Q8TAP4 FAM138F-201ENST00000631376 1183 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
LMO3Q8TAP4 HLA-C-210ENST00000640219 976 ntBASIC14.27□□□□□ -0.13
LMO3Q8TAP4 PARP3-202ENST00000417220 2472 ntAPPRIS P3 TSL 5 BASIC14.27□□□□□ -0.13
LMO3Q8TAP4 NUTM2E-202ENST00000602967 3623 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
LMO3Q8TAP4 NPTN-IT1-201ENST00000628401 2283 ntBASIC14.27□□□□□ -0.13
LMO3Q8TAP4 RORC-201ENST00000318247 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
LMO3Q8TAP4 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
LMO3Q8TAP4 LEPROTL1-201ENST00000321250 3173 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
LMO3Q8TAP4 NISCH-212ENST00000488380 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
LMO3Q8TAP4 PCDHB17P-202ENST00000623466 3066 ntBASIC14.27□□□□□ -0.13
LMO3Q8TAP4 MME-204ENST00000462745 3590 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
LMO3Q8TAP4 CDC20-201ENST00000310955 1675 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LMO3Q8TAP4 ARRB2-207ENST00000571206 1659 ntTSL 5 BASIC14.26□□□□□ -0.13
LMO3Q8TAP4 DPH2-201ENST00000255108 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LMO3Q8TAP4 AC009093.9-201ENST00000566038 1611 ntBASIC14.26□□□□□ -0.13
LMO3Q8TAP4 CTAGE13P-201ENST00000416709 2446 ntBASIC14.26□□□□□ -0.13
LMO3Q8TAP4 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
LMO3Q8TAP4 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LMO3Q8TAP4 TMUB2-205ENST00000587172 1598 ntTSL 2 BASIC14.26□□□□□ -0.13
LMO3Q8TAP4 LINC00967-203ENST00000518035 1502 ntTSL 2 BASIC14.26□□□□□ -0.13
LMO3Q8TAP4 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
LMO3Q8TAP4 THSD1-201ENST00000258613 2962 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LMO3Q8TAP4 SUCO-209ENST00000610051 2925 ntTSL 2 BASIC14.26□□□□□ -0.13
LMO3Q8TAP4 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LMO3Q8TAP4 PISD-203ENST00000397500 2194 ntTSL 5 BASIC14.26□□□□□ -0.13
LMO3Q8TAP4 PCNA-202ENST00000379160 1359 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
LMO3Q8TAP4 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
LMO3Q8TAP4 SCN8A-215ENST00000638820 3359 ntTSL 5 BASIC14.26□□□□□ -0.13
LMO3Q8TAP4 SRRM1-201ENST00000323848 4011 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
LMO3Q8TAP4 NR4A1-201ENST00000243050 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LMO3Q8TAP4 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC14.26□□□□□ -0.13
LMO3Q8TAP4 PSMB4-201ENST00000290541 964 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms