Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 SFTPA2-202ENST00000372327 815 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PDE6BP35913 MRPL36-201ENST00000382647 587 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
PDE6BP35913 GSTM2P1-201ENST00000405166 654 ntBASIC16.34■□□□□ 0.21
PDE6BP35913 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PDE6BP35913 TACR1-202ENST00000409848 1270 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PDE6BP35913 AL627095.1-201ENST00000414775 321 ntBASIC16.34■□□□□ 0.21
PDE6BP35913 FTLP3-201ENST00000427242 528 ntBASIC16.34■□□□□ 0.21
PDE6BP35913 GOSR1-205ENST00000467337 1011 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PDE6BP35913 FPGT-205ENST00000482102 561 ntTSL 4 BASIC16.34■□□□□ 0.21
PDE6BP35913 RN7SL363P-201ENST00000482412 273 ntBASIC16.34■□□□□ 0.21
PDE6BP35913 RPS23-205ENST00000510019 1019 ntTSL 4 BASIC16.34■□□□□ 0.21
PDE6BP35913 AC100797.1-201ENST00000520760 316 ntTSL 2 BASIC16.34■□□□□ 0.21
PDE6BP35913 BBOX1-AS1-203ENST00000530430 879 ntTSL 4 BASIC16.34■□□□□ 0.21
PDE6BP35913 BBOX1-AS1-204ENST00000531363 745 ntTSL 2 BASIC16.34■□□□□ 0.21
PDE6BP35913 FP325317.1-201ENST00000539936 1042 ntBASIC16.34■□□□□ 0.21
PDE6BP35913 JPT2-214ENST00000569765 782 ntTSL 2 BASIC16.34■□□□□ 0.21
PDE6BP35913 AL139260.3-204ENST00000621281 609 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
PDE6BP35913 ECM1-203ENST00000369049 1925 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
PDE6BP35913 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PDE6BP35913 AZGP1-201ENST00000292401 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PDE6BP35913 VOPP1-204ENST00000418904 1317 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PDE6BP35913 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PDE6BP35913 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PDE6BP35913 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PDE6BP35913 MNT-201ENST00000174618 4996 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PDE6BP35913 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC16.34■□□□□ 0.21
PDE6BP35913 SH3GLB2-206ENST00000417224 1468 ntTSL 5 BASIC16.34■□□□□ 0.21
PDE6BP35913 STMN1-206ENST00000455785 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PDE6BP35913 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PDE6BP35913 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PDE6BP35913 AL391097.1-201ENST00000432706 1620 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PDE6BP35913 COPS7B-223ENST00000611614 2468 ntTSL 3 BASIC16.34■□□□□ 0.21
PDE6BP35913 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PDE6BP35913 ADRA1A-210ENST00000519229 1838 ntTSL 5 BASIC16.33■□□□□ 0.21
PDE6BP35913 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
PDE6BP35913 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
PDE6BP35913 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
PDE6BP35913 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
PDE6BP35913 AC117489.1-201ENST00000625169 3217 ntBASIC16.33■□□□□ 0.21
PDE6BP35913 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PDE6BP35913 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
PDE6BP35913 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PDE6BP35913 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PDE6BP35913 RNA5SP248-201ENST00000365602 127 ntBASIC16.33■□□□□ 0.2
PDE6BP35913 PSMA7-202ENST00000370861 773 ntTSL 5 BASIC16.33■□□□□ 0.2
PDE6BP35913 POLR3DP1-201ENST00000398689 1176 ntBASIC16.33■□□□□ 0.2
PDE6BP35913 RNA5SP407-201ENST00000410275 110 ntBASIC16.33■□□□□ 0.2
PDE6BP35913 AL049792.1-201ENST00000424708 1262 ntBASIC16.33■□□□□ 0.2
PDE6BP35913 AL121972.2-201ENST00000431108 556 ntTSL 4 BASIC16.33■□□□□ 0.2
PDE6BP35913 FDPS-206ENST00000467076 1178 ntAPPRIS ALT1 TSL 3 BASIC16.33■□□□□ 0.2
PDE6BP35913 AC092284.1-201ENST00000511386 1289 ntBASIC16.33■□□□□ 0.2
PDE6BP35913 ST3GAL1P1-201ENST00000513810 1014 ntBASIC16.33■□□□□ 0.2
PDE6BP35913 NEMF-210ENST00000556672 590 ntTSL 2 BASIC16.33■□□□□ 0.2
PDE6BP35913 AL390726.3-201ENST00000567428 635 ntTSL 5 BASIC16.33■□□□□ 0.2
PDE6BP35913 AC015818.3-201ENST00000583797 589 ntBASIC16.33■□□□□ 0.2
PDE6BP35913 SMIM22-201ENST00000586005 366 ntAPPRIS P4 TSL 3 BASIC16.33■□□□□ 0.2
PDE6BP35913 AP005264.6-203ENST00000586882 1050 ntTSL 5 BASIC16.33■□□□□ 0.2
PDE6BP35913 AC091736.1-201ENST00000609370 305 ntBASIC16.33■□□□□ 0.2
PDE6BP35913 FAM69A-204ENST00000615519 865 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PDE6BP35913 Metazoa_SRP.67-201ENST00000617099 296 ntBASIC16.33■□□□□ 0.2
PDE6BP35913 SIGLEC20P-201ENST00000595243 1311 ntBASIC16.33■□□□□ 0.2
PDE6BP35913 OPRM1-210ENST00000452687 1352 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PDE6BP35913 AC073869.1-201ENST00000415574 2762 ntBASIC16.33■□□□□ 0.2
PDE6BP35913 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PDE6BP35913 ST3GAL3-202ENST00000330208 1479 ntTSL 5 BASIC16.33■□□□□ 0.2
PDE6BP35913 THPO-203ENST00000445696 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
PDE6BP35913 KIR2DL4-204ENST00000359085 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
PDE6BP35913 POLR2J2-203ENST00000476151 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PDE6BP35913 GMPR2-224ENST00000559910 1562 ntTSL 5 BASIC16.33■□□□□ 0.2
PDE6BP35913 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
PDE6BP35913 AC073862.3-201ENST00000624597 1648 ntBASIC16.33■□□□□ 0.2
PDE6BP35913 AL512488.1-201ENST00000433544 1671 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PDE6BP35913 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
PDE6BP35913 IP6K2-201ENST00000328631 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PDE6BP35913 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PDE6BP35913 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC16.33■□□□□ 0.2
PDE6BP35913 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
PDE6BP35913 C12orf76-201ENST00000309050 1964 ntTSL 2 BASIC16.33■□□□□ 0.2
PDE6BP35913 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
PDE6BP35913 LINC01114-202ENST00000424321 2112 ntTSL 2 BASIC16.33■□□□□ 0.2
PDE6BP35913 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC16.33■□□□□ 0.2
PDE6BP35913 LINC00638-201ENST00000555578 2518 ntBASIC16.33■□□□□ 0.2
PDE6BP35913 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
PDE6BP35913 CICP20-201ENST00000443330 2801 ntBASIC16.32■□□□□ 0.2
PDE6BP35913 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
PDE6BP35913 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
PDE6BP35913 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
PDE6BP35913 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PDE6BP35913 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
PDE6BP35913 ANAPC15-201ENST00000227618 886 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
PDE6BP35913 HSPA6-201ENST00000309758 2371 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
PDE6BP35913 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
PDE6BP35913 ATF3-202ENST00000341491 2033 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PDE6BP35913 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PDE6BP35913 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
PDE6BP35913 TTC39A-204ENST00000371750 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
PDE6BP35913 LSM2-208ENST00000375661 876 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PDE6BP35913 AC004884.1-201ENST00000393647 319 ntBASIC16.32■□□□□ 0.2
PDE6BP35913 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC16.32■□□□□ 0.2
PDE6BP35913 PHBP3-201ENST00000412562 819 ntBASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms