Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC10.99□□□□□ -0.65
RAB40CQ96S21 FAM131B-203ENST00000409408 5856 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
RAB40CQ96S21 C9orf3-201ENST00000277198 1966 ntTSL 2 BASIC10.99□□□□□ -0.65
RAB40CQ96S21 CEP83-208ENST00000547575 3122 ntTSL 2 BASIC10.99□□□□□ -0.65
RAB40CQ96S21 PSMC3IP-201ENST00000253789 1408 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
RAB40CQ96S21 SPDYE16-203ENST00000633306 2591 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
RAB40CQ96S21 PCDHA10-202ENST00000506939 3788 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
RAB40CQ96S21 ZFP1-201ENST00000332307 1502 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
RAB40CQ96S21 SESN2-201ENST00000253063 3453 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
RAB40CQ96S21 ZNF606-201ENST00000341164 4248 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
RAB40CQ96S21 SRSF5-201ENST00000394366 1638 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
RAB40CQ96S21 ZNF529-209ENST00000591340 4331 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
RAB40CQ96S21 LPO-204ENST00000543544 2350 ntTSL 2 BASIC10.98□□□□□ -0.65
RAB40CQ96S21 MID1IP1-204ENST00000614558 3781 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
RAB40CQ96S21 TNK1-201ENST00000570896 3122 ntAPPRIS P3 TSL 5 BASIC10.98□□□□□ -0.65
RAB40CQ96S21 DUSP22-211ENST00000604971 3824 ntTSL 2 BASIC10.98□□□□□ -0.65
RAB40CQ96S21 ARFIP2-210ENST00000614314 3846 ntTSL 2 BASIC10.98□□□□□ -0.65
RAB40CQ96S21 USP5-201ENST00000229268 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC10.98□□□□□ -0.65
RAB40CQ96S21 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
RAB40CQ96S21 TBC1D22A-203ENST00000380995 3934 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
RAB40CQ96S21 ENDOV-203ENST00000517795 2548 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
RAB40CQ96S21 PITPNM3-202ENST00000421306 6945 ntAPPRIS ALT2 TSL 2 BASIC10.98□□□□□ -0.65
RAB40CQ96S21 GMPS-203ENST00000496455 8751 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
RAB40CQ96S21 TRUB2-201ENST00000372890 5719 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
RAB40CQ96S21 DIDO1-202ENST00000354665 2707 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
RAB40CQ96S21 MOB3C-201ENST00000271139 2800 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
RAB40CQ96S21 NAV2-204ENST00000396087 7882 ntTSL 5 BASIC10.98□□□□□ -0.65
RAB40CQ96S21 PLOD3-201ENST00000223127 2920 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
RAB40CQ96S21 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
RAB40CQ96S21 ZMAT5-201ENST00000344318 899 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
RAB40CQ96S21 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
RAB40CQ96S21 CHD1L-202ENST00000369258 2967 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
RAB40CQ96S21 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC10.98□□□□□ -0.65
RAB40CQ96S21 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC10.98□□□□□ -0.65
RAB40CQ96S21 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
RAB40CQ96S21 MPV17-206ENST00000402722 827 ntTSL 3 BASIC10.98□□□□□ -0.65
RAB40CQ96S21 AL359853.1-202ENST00000415218 544 ntTSL 2 BASIC10.98□□□□□ -0.65
RAB40CQ96S21 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC10.98□□□□□ -0.65
RAB40CQ96S21 TSPY25P-201ENST00000429463 745 ntBASIC10.98□□□□□ -0.65
RAB40CQ96S21 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC10.98□□□□□ -0.65
RAB40CQ96S21 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC10.98□□□□□ -0.65
RAB40CQ96S21 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC10.98□□□□□ -0.65
RAB40CQ96S21 AC102953.1-201ENST00000445345 498 ntTSL 2 BASIC10.98□□□□□ -0.65
RAB40CQ96S21 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC10.98□□□□□ -0.65
RAB40CQ96S21 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC10.98□□□□□ -0.65
RAB40CQ96S21 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC10.98□□□□□ -0.65
RAB40CQ96S21 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
RAB40CQ96S21 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC10.98□□□□□ -0.65
RAB40CQ96S21 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC10.98□□□□□ -0.65
RAB40CQ96S21 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC10.98□□□□□ -0.65
RAB40CQ96S21 AL137779.3-201ENST00000553295 729 ntBASIC10.98□□□□□ -0.65
RAB40CQ96S21 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC10.98□□□□□ -0.65
RAB40CQ96S21 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC10.98□□□□□ -0.65
RAB40CQ96S21 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
RAB40CQ96S21 AC092171.5-201ENST00000608012 942 ntBASIC10.98□□□□□ -0.65
RAB40CQ96S21 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
RAB40CQ96S21 AC008687.7-202ENST00000637404 953 ntBASIC10.98□□□□□ -0.65
RAB40CQ96S21 TNFAIP3-206ENST00000612899 4735 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
RAB40CQ96S21 COL8A1-202ENST00000273342 3029 ntAPPRIS P1 TSL 2 BASIC10.98□□□□□ -0.65
RAB40CQ96S21 YWHAB-201ENST00000353703 3049 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
RAB40CQ96S21 GNAS-214ENST00000371100 4029 ntTSL 5 BASIC10.98□□□□□ -0.65
RAB40CQ96S21 MROH7-TTC4-201ENST00000414150 5867 ntAPPRIS P5 TSL 2 BASIC10.98□□□□□ -0.65
RAB40CQ96S21 ABL2-207ENST00000507173 3177 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
RAB40CQ96S21 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC10.98□□□□□ -0.65
RAB40CQ96S21 AQP2-201ENST00000199280 4174 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
RAB40CQ96S21 CICP2-201ENST00000420675 2328 ntBASIC10.98□□□□□ -0.65
RAB40CQ96S21 FBXO22-201ENST00000308275 10725 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
RAB40CQ96S21 IL1R2-202ENST00000393414 1405 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
RAB40CQ96S21 SLC5A11-202ENST00000424767 2399 ntTSL 2 BASIC10.98□□□□□ -0.65
RAB40CQ96S21 ZNF621-204ENST00000431278 2613 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
RAB40CQ96S21 MIR22HG-208ENST00000574306 2626 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
RAB40CQ96S21 EDNRB-204ENST00000626030 1571 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
RAB40CQ96S21 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
RAB40CQ96S21 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
RAB40CQ96S21 LIMS1-204ENST00000409441 1627 ntAPPRIS ALT1 TSL 1 (best) BASIC10.98□□□□□ -0.65
RAB40CQ96S21 SLC26A6-203ENST00000358747 2729 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
RAB40CQ96S21 BAIAP3-204ENST00000426824 3930 ntAPPRIS ALT2 TSL 2 BASIC10.98□□□□□ -0.65
RAB40CQ96S21 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC10.98□□□□□ -0.65
RAB40CQ96S21 SHMT2-205ENST00000553474 1765 ntTSL 2 BASIC10.98□□□□□ -0.65
RAB40CQ96S21 BANK1-202ENST00000428908 3044 ntTSL 5 BASIC10.98□□□□□ -0.65
RAB40CQ96S21 SLC25A31-201ENST00000281154 1841 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
RAB40CQ96S21 LINC01134-202ENST00000439488 1940 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
RAB40CQ96S21 FPGT-202ENST00000370898 3254 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
RAB40CQ96S21 AC009093.1-201ENST00000566070 2099 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
RAB40CQ96S21 AL513497.1-201ENST00000624273 2083 ntBASIC10.97□□□□□ -0.65
RAB40CQ96S21 AC120114.4-201ENST00000623731 2194 ntBASIC10.97□□□□□ -0.65
RAB40CQ96S21 LRTM2-201ENST00000299194 3688 ntAPPRIS P1 TSL 2 BASIC10.97□□□□□ -0.65
RAB40CQ96S21 SLC20A2-201ENST00000342228 3657 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
RAB40CQ96S21 MATR3-233ENST00000504203 2243 ntTSL 2 BASIC10.97□□□□□ -0.65
RAB40CQ96S21 TRPV1-201ENST00000310522 2340 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
RAB40CQ96S21 ELMOD3-202ENST00000393852 2332 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
RAB40CQ96S21 SPACA6P-AS-201ENST00000602324 3962 ntTSL 2 BASIC10.97□□□□□ -0.65
RAB40CQ96S21 GFRA1-203ENST00000369236 9109 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
RAB40CQ96S21 NOL4L-203ENST00000359676 5991 ntTSL 2 BASIC10.97□□□□□ -0.65
RAB40CQ96S21 EPB41L1-212ENST00000441639 5967 ntTSL 5 BASIC10.97□□□□□ -0.65
RAB40CQ96S21 ATXN2-226ENST00000608853 4376 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
RAB40CQ96S21 GNPDA1-210ENST00000508177 2980 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
RAB40CQ96S21 ARMC9-215ENST00000614261 4975 ntTSL 5 BASIC10.97□□□□□ -0.65
RAB40CQ96S21 PCDHAC1-201ENST00000253807 5299 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
RAB40CQ96S21 DLGAP2-201ENST00000421627 3165 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 81.1 ms