Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CLK1P49759 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CLK1P49759 MEP1A-201ENST00000230588 2892 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CLK1P49759 ZNF239-205ENST00000535642 1904 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
CLK1P49759 ARGLU1-203ENST00000400198 3390 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CLK1P49759 PPT1-204ENST00000439754 2195 ntTSL 3 BASIC12.8□□□□□ -0.36
CLK1P49759 DNAJB12-202ENST00000394903 3198 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CLK1P49759 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC12.8□□□□□ -0.36
CLK1P49759 HOXB13-201ENST00000290295 3467 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CLK1P49759 DGKA-202ENST00000394147 2770 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
CLK1P49759 ALDH7A1-234ENST00000637782 1773 ntAPPRIS ALT1 TSL 5 BASIC12.8□□□□□ -0.36
CLK1P49759 HMBOX1-203ENST00000397358 4082 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CLK1P49759 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
CLK1P49759 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
CLK1P49759 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CLK1P49759 CALR4P-201ENST00000431943 946 ntBASIC12.8□□□□□ -0.36
CLK1P49759 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC12.8□□□□□ -0.36
CLK1P49759 AL596276.2-201ENST00000447525 331 ntBASIC12.8□□□□□ -0.36
CLK1P49759 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC12.8□□□□□ -0.36
CLK1P49759 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC12.8□□□□□ -0.36
CLK1P49759 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC12.8□□□□□ -0.36
CLK1P49759 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC12.8□□□□□ -0.36
CLK1P49759 AL161670.2-201ENST00000557650 1227 ntBASIC12.8□□□□□ -0.36
CLK1P49759 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC12.8□□□□□ -0.36
CLK1P49759 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC12.8□□□□□ -0.36
CLK1P49759 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CLK1P49759 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CLK1P49759 HPN-206ENST00000597419 1212 ntTSL 5 BASIC12.8□□□□□ -0.36
CLK1P49759 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC12.8□□□□□ -0.36
CLK1P49759 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC12.8□□□□□ -0.36
CLK1P49759 GMPS-203ENST00000496455 8751 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CLK1P49759 WDR62-203ENST00000401500 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
CLK1P49759 DYRK4-201ENST00000010132 1840 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
CLK1P49759 BRD7P5-201ENST00000299197 1822 ntBASIC12.8□□□□□ -0.36
CLK1P49759 HAUS6-202ENST00000380502 6536 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CLK1P49759 BCL2L1-202ENST00000376055 2383 ntTSL 2 BASIC12.8□□□□□ -0.36
CLK1P49759 ZNF197-204ENST00000383745 2935 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CLK1P49759 FOXN4-202ENST00000355216 2958 ntTSL 2 BASIC12.8□□□□□ -0.36
CLK1P49759 MADD-201ENST00000311027 5990 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
CLK1P49759 FMNL1-202ENST00000331495 4101 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CLK1P49759 DRD2-208ENST00000542968 2467 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
CLK1P49759 METAP1-201ENST00000296411 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CLK1P49759 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CLK1P49759 AC018445.4-201ENST00000624066 2291 ntBASIC12.79□□□□□ -0.36
CLK1P49759 PDZD4-209ENST00000544474 3418 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CLK1P49759 PCDHGA9-201ENST00000573521 4605 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
CLK1P49759 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
CLK1P49759 PAK3-211ENST00000518291 2098 ntTSL 5 BASIC12.79□□□□□ -0.36
CLK1P49759 EPB42-203ENST00000540029 2098 ntTSL 2 BASIC12.79□□□□□ -0.36
CLK1P49759 CSNK1G1-205ENST00000607537 2083 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CLK1P49759 AGAP6-202ENST00000412531 2372 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
CLK1P49759 NPTN-201ENST00000345330 2444 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
CLK1P49759 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CLK1P49759 AC003986.1-201ENST00000452700 1526 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CLK1P49759 MOCS1-204ENST00000373188 3358 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CLK1P49759 PRPF4-201ENST00000374198 2787 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
CLK1P49759 RIPK4-202ENST00000352483 4016 ntTSL 5 BASIC12.79□□□□□ -0.36
CLK1P49759 ERVK13-1-205ENST00000568395 5578 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CLK1P49759 NDUFAF7-201ENST00000002125 2176 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CLK1P49759 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CLK1P49759 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC12.79□□□□□ -0.36
CLK1P49759 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
CLK1P49759 MBP-201ENST00000354542 575 ntTSL 2 BASIC12.79□□□□□ -0.36
CLK1P49759 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC12.79□□□□□ -0.36
CLK1P49759 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CLK1P49759 BX679664.3-201ENST00000414070 555 ntBASIC12.79□□□□□ -0.36
CLK1P49759 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
CLK1P49759 RPS9P1-201ENST00000419943 583 ntBASIC12.79□□□□□ -0.36
CLK1P49759 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CLK1P49759 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CLK1P49759 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CLK1P49759 AC113935.1-201ENST00000471722 555 ntBASIC12.79□□□□□ -0.36
CLK1P49759 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
CLK1P49759 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC12.79□□□□□ -0.36
CLK1P49759 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC12.79□□□□□ -0.36
CLK1P49759 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC12.79□□□□□ -0.36
CLK1P49759 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC12.79□□□□□ -0.36
CLK1P49759 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC12.79□□□□□ -0.36
CLK1P49759 SLC13A4-201ENST00000354042 2897 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CLK1P49759 IL12RB1-207ENST00000600835 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CLK1P49759 ZNF646-201ENST00000300850 6892 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
CLK1P49759 PUM2-203ENST00000361078 6251 ntTSL 2 BASIC12.79□□□□□ -0.36
CLK1P49759 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CLK1P49759 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
CLK1P49759 FCGR3A-206ENST00000443193 2306 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CLK1P49759 ITGA2B-201ENST00000262407 3333 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CLK1P49759 RASAL2-201ENST00000367649 4378 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
CLK1P49759 BEND6-202ENST00000370746 2379 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
CLK1P49759 SLC14A1-205ENST00000502059 2371 ntTSL 2 BASIC12.79□□□□□ -0.36
CLK1P49759 SPTY2D1-201ENST00000336349 5754 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CLK1P49759 PDE5A-202ENST00000354960 7154 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
CLK1P49759 MID1IP1-204ENST00000614558 3781 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
CLK1P49759 AL358781.1-202ENST00000321081 1360 ntBASIC12.79□□□□□ -0.36
CLK1P49759 IL21R-201ENST00000337929 4849 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CLK1P49759 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC12.79□□□□□ -0.36
CLK1P49759 NPLOC4-202ENST00000374747 5538 ntTSL 2 BASIC12.79□□□□□ -0.36
CLK1P49759 ARHGAP21-217ENST00000612832 5514 ntTSL 5 BASIC12.79□□□□□ -0.36
CLK1P49759 DIAPH2-201ENST00000324765 9333 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
CLK1P49759 KRT74-201ENST00000305620 2788 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CLK1P49759 STX3-207ENST00000633708 3111 ntTSL 5 BASIC12.79□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms