Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 TMOD1-201ENST00000259365 3343 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SLC1A1P43005 C20orf96-203ENST00000400269 1608 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
SLC1A1P43005 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SLC1A1P43005 AGAP4-203ENST00000448048 2439 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
SLC1A1P43005 KIRREL3-205ENST00000529097 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
SLC1A1P43005 ZNF595-205ENST00000610261 2911 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
SLC1A1P43005 AL031666.1-201ENST00000413818 1809 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SLC1A1P43005 GLYR1-212ENST00000591451 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SLC1A1P43005 ABI2-201ENST00000261016 6634 ntTSL 2 BASIC14.1□□□□□ -0.15
SLC1A1P43005 ABI2-203ENST00000261018 6638 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SLC1A1P43005 CCDC117-205ENST00000448492 3937 ntTSL 2 BASIC14.1□□□□□ -0.15
SLC1A1P43005 CCDC88C-201ENST00000331194 3104 ntTSL 5 BASIC14.1□□□□□ -0.15
SLC1A1P43005 AL805961.2-201ENST00000642139 4817 ntBASIC14.1□□□□□ -0.15
SLC1A1P43005 AC141928.1-201ENST00000511928 4525 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SLC1A1P43005 DFFA-202ENST00000377038 6032 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SLC1A1P43005 NCDN-201ENST00000356090 3433 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SLC1A1P43005 ZNF564-201ENST00000339282 2935 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SLC1A1P43005 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
SLC1A1P43005 CERCAM-214ENST00000613052 1429 ntTSL 5 BASIC14.1□□□□□ -0.15
SLC1A1P43005 PTPN5-203ENST00000396168 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SLC1A1P43005 STK40-203ENST00000373130 3628 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SLC1A1P43005 ANKH-201ENST00000284268 8203 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SLC1A1P43005 TMEM14C-201ENST00000229563 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SLC1A1P43005 HLA-DMA-203ENST00000395305 777 ntBASIC14.1□□□□□ -0.15
SLC1A1P43005 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC14.1□□□□□ -0.15
SLC1A1P43005 ABCD1P4-201ENST00000399687 604 ntBASIC14.1□□□□□ -0.15
SLC1A1P43005 SNU13-204ENST00000402458 462 ntTSL 3 BASIC14.1□□□□□ -0.15
SLC1A1P43005 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC14.1□□□□□ -0.15
SLC1A1P43005 AC024028.1-201ENST00000437145 437 ntTSL 3 BASIC14.1□□□□□ -0.15
SLC1A1P43005 AL118511.1-201ENST00000439341 794 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SLC1A1P43005 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC14.1□□□□□ -0.15
SLC1A1P43005 LAMTOR4-209ENST00000488241 613 ntTSL 2 BASIC14.1□□□□□ -0.15
SLC1A1P43005 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC14.1□□□□□ -0.15
SLC1A1P43005 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC14.1□□□□□ -0.15
SLC1A1P43005 ANAPC15-204ENST00000535234 848 ntAPPRIS P3 TSL 2 BASIC14.1□□□□□ -0.15
SLC1A1P43005 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SLC1A1P43005 AC090825.1-202ENST00000560059 665 ntTSL 3 BASIC14.1□□□□□ -0.15
SLC1A1P43005 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC14.1□□□□□ -0.15
SLC1A1P43005 AC244093.1-201ENST00000610837 814 ntBASIC14.1□□□□□ -0.15
SLC1A1P43005 GHRHR-212ENST00000611037 923 ntTSL 5 BASIC14.1□□□□□ -0.15
SLC1A1P43005 CU633904.3-201ENST00000624042 1029 ntBASIC14.1□□□□□ -0.15
SLC1A1P43005 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC14.1□□□□□ -0.15
SLC1A1P43005 AC138627.1-207ENST00000641560 1006 ntBASIC14.1□□□□□ -0.15
SLC1A1P43005 ZNF772-203ENST00000425074 1601 ntTSL 2 BASIC14.1□□□□□ -0.15
SLC1A1P43005 DDX54-201ENST00000306014 4377 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
SLC1A1P43005 USP5-201ENST00000229268 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SLC1A1P43005 GNB5-203ENST00000396335 2678 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SLC1A1P43005 PAK1-215ENST00000530617 3001 ntTSL 2 BASIC14.1□□□□□ -0.15
SLC1A1P43005 PABPC1P2-201ENST00000471997 1805 ntBASIC14.1□□□□□ -0.15
SLC1A1P43005 LAIR1-204ENST00000391743 2735 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
SLC1A1P43005 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC14.1□□□□□ -0.15
SLC1A1P43005 NUTM2E-202ENST00000602967 3623 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
SLC1A1P43005 ZNF274-210ENST00000610905 2559 ntAPPRIS P4 TSL 5 BASIC14.1□□□□□ -0.15
SLC1A1P43005 CSNK1G1-209ENST00000634811 2592 ntAPPRIS ALT1 TSL 5 BASIC14.1□□□□□ -0.15
SLC1A1P43005 LILRA6-203ENST00000396365 1890 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
SLC1A1P43005 SLC1A5-202ENST00000434726 1872 ntTSL 2 BASIC14.1□□□□□ -0.15
SLC1A1P43005 CTAGE10P-201ENST00000318353 2408 ntBASIC14.1□□□□□ -0.15
SLC1A1P43005 ZNF772-204ENST00000427512 5130 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SLC1A1P43005 GNG12-AS1-201ENST00000413628 2058 ntTSL 2 BASIC14.1□□□□□ -0.15
SLC1A1P43005 H1FX-AS1-201ENST00000383461 2600 ntTSL 2 BASIC14.1□□□□□ -0.15
SLC1A1P43005 MPP4-203ENST00000396886 2250 ntTSL 2 BASIC14.1□□□□□ -0.15
SLC1A1P43005 GOPC-202ENST00000368498 4450 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SLC1A1P43005 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SLC1A1P43005 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SLC1A1P43005 FAM90A26-201ENST00000512047 2492 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
SLC1A1P43005 KRT18P40-201ENST00000599859 1571 ntBASIC14.09□□□□□ -0.15
SLC1A1P43005 MCM2-201ENST00000265056 3622 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SLC1A1P43005 SPCS3-201ENST00000503362 4571 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SLC1A1P43005 LINC00343-203ENST00000454555 1765 ntTSL 2 BASIC14.09□□□□□ -0.15
SLC1A1P43005 GRM1-204ENST00000492807 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
SLC1A1P43005 GATC-203ENST00000551765 4244 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SLC1A1P43005 HTR5A-201ENST00000287907 2912 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SLC1A1P43005 DUSP11-202ENST00000443070 2175 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SLC1A1P43005 MGLL-202ENST00000398101 1414 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SLC1A1P43005 WDR66-201ENST00000288912 4467 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
SLC1A1P43005 ZNF689-201ENST00000287461 3547 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SLC1A1P43005 EPHB1-201ENST00000398015 4672 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SLC1A1P43005 SRL-202ENST00000537996 1814 ntTSL 2 BASIC14.09□□□□□ -0.15
SLC1A1P43005 VPS54-203ENST00000409558 4337 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SLC1A1P43005 GAS8-201ENST00000268699 3185 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SLC1A1P43005 TMED7-201ENST00000456936 3757 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SLC1A1P43005 TRMT61A-202ENST00000389749 3229 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SLC1A1P43005 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC14.09□□□□□ -0.15
SLC1A1P43005 DMKN-203ENST00000402589 935 ntAPPRIS ALT2 TSL 3 BASIC14.09□□□□□ -0.15
SLC1A1P43005 AC007274.2-201ENST00000421675 662 ntBASIC14.09□□□□□ -0.15
SLC1A1P43005 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC14.09□□□□□ -0.15
SLC1A1P43005 RGS5-216ENST00000449680 788 ntTSL 3 BASIC14.09□□□□□ -0.15
SLC1A1P43005 ZAP70-202ENST00000451498 1085 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SLC1A1P43005 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC14.09□□□□□ -0.15
SLC1A1P43005 TSACC-208ENST00000481479 741 ntTSL 2 BASIC14.09□□□□□ -0.15
SLC1A1P43005 MRPL22P1-201ENST00000505398 616 ntBASIC14.09□□□□□ -0.15
SLC1A1P43005 AC105254.1-201ENST00000507782 621 ntTSL 4 BASIC14.09□□□□□ -0.15
SLC1A1P43005 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC14.09□□□□□ -0.15
SLC1A1P43005 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC14.09□□□□□ -0.15
SLC1A1P43005 HERC2P11-201ENST00000562845 725 ntBASIC14.09□□□□□ -0.15
SLC1A1P43005 MT3-203ENST00000565838 421 ntTSL 3 BASIC14.09□□□□□ -0.15
SLC1A1P43005 AC100756.2-201ENST00000569537 736 ntBASIC14.09□□□□□ -0.15
SLC1A1P43005 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC14.09□□□□□ -0.15
SLC1A1P43005 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC14.09□□□□□ -0.15
SLC1A1P43005 POLR2E-204ENST00000586746 1096 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms