Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 AC012617.1-202ENST00000586488 509 ntTSL 2 BASIC14.09□□□□□ -0.15
MTHFRP42898 AC007292.1-201ENST00000594444 746 ntTSL 2 BASIC14.09□□□□□ -0.15
MTHFRP42898 Metazoa_SRP.173-201ENST00000614020 273 ntBASIC14.09□□□□□ -0.15
MTHFRP42898 AC139100.2-201ENST00000616901 662 ntBASIC14.09□□□□□ -0.15
MTHFRP42898 LINC01012-203ENST00000628762 743 ntTSL 5 BASIC14.09□□□□□ -0.15
MTHFRP42898 GPNMB-203ENST00000409458 1673 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
MTHFRP42898 PRUNE1-205ENST00000368937 1850 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
MTHFRP42898 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC14.09□□□□□ -0.15
MTHFRP42898 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC14.09□□□□□ -0.15
MTHFRP42898 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
MTHFRP42898 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
MTHFRP42898 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
MTHFRP42898 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
MTHFRP42898 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
MTHFRP42898 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
MTHFRP42898 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC14.09□□□□□ -0.15
MTHFRP42898 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC14.09□□□□□ -0.15
MTHFRP42898 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
MTHFRP42898 CA2-201ENST00000285379 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
MTHFRP42898 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
MTHFRP42898 AKIP1-203ENST00000309377 1327 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
MTHFRP42898 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC14.09□□□□□ -0.15
MTHFRP42898 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
MTHFRP42898 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
MTHFRP42898 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
MTHFRP42898 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC14.09□□□□□ -0.15
MTHFRP42898 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
MTHFRP42898 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
MTHFRP42898 MYC-206ENST00000613283 1365 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
MTHFRP42898 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
MTHFRP42898 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.15
MTHFRP42898 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
MTHFRP42898 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
MTHFRP42898 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
MTHFRP42898 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
MTHFRP42898 CLEC10A-202ENST00000416562 1646 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
MTHFRP42898 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC14.08□□□□□ -0.15
MTHFRP42898 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
MTHFRP42898 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
MTHFRP42898 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.15
MTHFRP42898 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
MTHFRP42898 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC14.08□□□□□ -0.16
MTHFRP42898 AC012617.1-204ENST00000586340 2305 ntBASIC14.08□□□□□ -0.16
MTHFRP42898 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
MTHFRP42898 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
MTHFRP42898 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
MTHFRP42898 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
MTHFRP42898 BPIFB1-201ENST00000253354 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
MTHFRP42898 CTRL-205ENST00000574481 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
MTHFRP42898 TAMM41-201ENST00000273037 1297 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
MTHFRP42898 NR1I3-201ENST00000367979 1074 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
MTHFRP42898 NR1I3-207ENST00000367985 1074 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
MTHFRP42898 AL356653.1-201ENST00000402743 360 ntBASIC14.08□□□□□ -0.16
MTHFRP42898 ZBTB46-AS1-201ENST00000435912 533 ntTSL 3 BASIC14.08□□□□□ -0.16
MTHFRP42898 OR4C14P-201ENST00000440929 923 ntBASIC14.08□□□□□ -0.16
MTHFRP42898 UGT1A12P-201ENST00000447084 853 ntBASIC14.08□□□□□ -0.16
MTHFRP42898 RPSAP16-201ENST00000447583 821 ntBASIC14.08□□□□□ -0.16
MTHFRP42898 RPL35P1-201ENST00000450819 370 ntBASIC14.08□□□□□ -0.16
MTHFRP42898 IGKV1OR2-108-201ENST00000453673 353 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
MTHFRP42898 FHIT-205ENST00000476844 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
MTHFRP42898 AC108724.1-201ENST00000481669 352 ntBASIC14.08□□□□□ -0.16
MTHFRP42898 CLNK-203ENST00000507719 1143 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
MTHFRP42898 NR1I3-225ENST00000508387 634 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
MTHFRP42898 TRAPPC4-212ENST00000533058 1209 ntTSL 2 BASIC14.08□□□□□ -0.16
MTHFRP42898 AL136040.1-201ENST00000557775 601 ntTSL 3 BASIC14.08□□□□□ -0.16
MTHFRP42898 AC091691.1-201ENST00000583587 1018 ntBASIC14.08□□□□□ -0.16
MTHFRP42898 AC138150.1-201ENST00000589950 570 ntTSL 4 BASIC14.08□□□□□ -0.16
MTHFRP42898 SRD5A3-AS1-203ENST00000591915 709 ntTSL 5 BASIC14.08□□□□□ -0.16
MTHFRP42898 AC087072.1-201ENST00000603727 421 ntBASIC14.08□□□□□ -0.16
MTHFRP42898 AC092535.4-201ENST00000609548 397 ntBASIC14.08□□□□□ -0.16
MTHFRP42898 MIR6125-201ENST00000618986 96 ntBASIC14.08□□□□□ -0.16
MTHFRP42898 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC14.08□□□□□ -0.16
MTHFRP42898 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
MTHFRP42898 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC14.08□□□□□ -0.16
MTHFRP42898 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
MTHFRP42898 AL356753.1-201ENST00000427035 2018 ntTSL 2 BASIC14.08□□□□□ -0.16
MTHFRP42898 HLA-DQA1-201ENST00000343139 1591 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
MTHFRP42898 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
MTHFRP42898 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.16
MTHFRP42898 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
MTHFRP42898 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
MTHFRP42898 OS9-220ENST00000552285 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
MTHFRP42898 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC14.08□□□□□ -0.16
MTHFRP42898 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
MTHFRP42898 HIST2H2BE-201ENST00000369155 2194 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
MTHFRP42898 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
MTHFRP42898 GOSR2-209ENST00000575949 1444 ntTSL 2 BASIC14.07□□□□□ -0.16
MTHFRP42898 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
MTHFRP42898 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
MTHFRP42898 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
MTHFRP42898 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
MTHFRP42898 SLC39A11-202ENST00000542342 2752 ntAPPRIS ALT1 TSL 2 BASIC14.07□□□□□ -0.16
MTHFRP42898 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC14.07□□□□□ -0.16
MTHFRP42898 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
MTHFRP42898 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
MTHFRP42898 COMMD10-201ENST00000274458 1469 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
MTHFRP42898 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC14.07□□□□□ -0.16
MTHFRP42898 WASF3-202ENST00000361042 4823 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
MTHFRP42898 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC14.07□□□□□ -0.16
MTHFRP42898 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms