Protein–RNA interactions for Protein: P05423

POLR3D, DNA-directed RNA polymerase III subunit RPC4, humanhuman

Predicted RBP Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR3DP05423 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC16.14■□□□□ 0.17
POLR3DP05423 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
POLR3DP05423 DHRS7C-201ENST00000330255 1006 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
POLR3DP05423 APOD-201ENST00000343267 1130 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
POLR3DP05423 SNORD23-201ENST00000408876 110 ntBASIC16.14■□□□□ 0.17
POLR3DP05423 AL132657.1-201ENST00000432530 712 ntTSL 3 BASIC16.14■□□□□ 0.17
POLR3DP05423 CLDN25-201ENST00000453129 754 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
POLR3DP05423 AGPAT5P1-201ENST00000455855 1019 ntBASIC16.14■□□□□ 0.17
POLR3DP05423 RN7SL147P-201ENST00000487345 298 ntBASIC16.14■□□□□ 0.17
POLR3DP05423 SMUG1-221ENST00000514196 553 ntTSL 4 BASIC16.14■□□□□ 0.17
POLR3DP05423 METTL7AP1-201ENST00000547343 496 ntBASIC16.14■□□□□ 0.17
POLR3DP05423 APOPT1-215ENST00000556253 783 ntTSL 3 BASIC16.14■□□□□ 0.17
POLR3DP05423 Metazoa_SRP.128-201ENST00000620543 314 ntBASIC16.14■□□□□ 0.17
POLR3DP05423 LINC00969-321ENST00000629990 806 ntTSL 5 BASIC16.14■□□□□ 0.17
POLR3DP05423 AC011451.3-201ENST00000634951 582 ntTSL 3 BASIC16.14■□□□□ 0.17
POLR3DP05423 AC144450.1-201ENST00000366424 1641 ntTSL 2 BASIC16.14■□□□□ 0.17
POLR3DP05423 DLGAP1-AS1-201ENST00000317114 1966 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
POLR3DP05423 ALG11-204ENST00000616513 1983 ntTSL 2 BASIC16.14■□□□□ 0.17
POLR3DP05423 CCDC126-202ENST00000409765 2324 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
POLR3DP05423 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
POLR3DP05423 KRT37-201ENST00000225550 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
POLR3DP05423 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
POLR3DP05423 PTCHD3-201ENST00000438700 2529 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
POLR3DP05423 NTSR1-201ENST00000370501 4132 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
POLR3DP05423 TAGLN3-205ENST00000478951 1301 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
POLR3DP05423 PEG10-205ENST00000612748 2585 ntAPPRIS P5 TSL 5 BASIC16.14■□□□□ 0.17
POLR3DP05423 DDX54-202ENST00000314045 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
POLR3DP05423 GOSR2-233ENST00000640068 3103 ntTSL 5 BASIC16.14■□□□□ 0.17
POLR3DP05423 GDPD5-215ENST00000533805 2424 ntTSL 2 BASIC16.14■□□□□ 0.17
POLR3DP05423 HINT3-201ENST00000229633 3314 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
POLR3DP05423 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
POLR3DP05423 KRT26-201ENST00000335552 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
POLR3DP05423 AC139795.2-201ENST00000499900 1751 ntTSL 2 BASIC16.13■□□□□ 0.17
POLR3DP05423 PPP2R2C-204ENST00000506140 1780 ntTSL 2 BASIC16.13■□□□□ 0.17
POLR3DP05423 AC134312.1-201ENST00000378417 3468 ntTSL 2 BASIC16.13■□□□□ 0.17
POLR3DP05423 OSBPL9-201ENST00000361556 2721 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
POLR3DP05423 AGBL2-205ENST00000528244 2929 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
POLR3DP05423 PRAME-202ENST00000398743 2196 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
POLR3DP05423 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
POLR3DP05423 ACTG1-206ENST00000573283 2002 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
POLR3DP05423 ZNF426-204ENST00000593003 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
POLR3DP05423 MLPH-201ENST00000264605 3823 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
POLR3DP05423 PCBD1-201ENST00000299299 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
POLR3DP05423 OTOS-201ENST00000319460 566 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
POLR3DP05423 LCE2C-201ENST00000368783 614 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
POLR3DP05423 AL359853.1-202ENST00000415218 544 ntTSL 2 BASIC16.13■□□□□ 0.17
POLR3DP05423 AL080243.1-201ENST00000423293 1060 ntBASIC16.13■□□□□ 0.17
POLR3DP05423 AC107464.2-201ENST00000502923 569 ntTSL 2 BASIC16.13■□□□□ 0.17
POLR3DP05423 NMNAT3-213ENST00000512391 794 ntTSL 3 BASIC16.13■□□□□ 0.17
POLR3DP05423 CMTM1-219ENST00000533953 934 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
POLR3DP05423 KCCAT198-201ENST00000549251 549 ntTSL 4 BASIC16.13■□□□□ 0.17
POLR3DP05423 AC068831.5-201ENST00000557387 328 ntBASIC16.13■□□□□ 0.17
POLR3DP05423 LINC00677-201ENST00000558224 486 ntTSL 3 BASIC16.13■□□□□ 0.17
POLR3DP05423 AC016586.1-201ENST00000600056 684 ntTSL 3 BASIC16.13■□□□□ 0.17
POLR3DP05423 AC113385.2-201ENST00000614465 762 ntBASIC16.13■□□□□ 0.17
POLR3DP05423 CRABP2-204ENST00000621784 1033 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
POLR3DP05423 ADAMTS9-AS1-216ENST00000626280 882 ntTSL 5 BASIC16.13■□□□□ 0.17
POLR3DP05423 AC139713.2-207ENST00000641556 1292 ntBASIC16.13■□□□□ 0.17
POLR3DP05423 VDAC2-202ENST00000313132 1467 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
POLR3DP05423 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
POLR3DP05423 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC16.13■□□□□ 0.17
POLR3DP05423 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
POLR3DP05423 CPEB1-213ENST00000617462 2068 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
POLR3DP05423 MYO1G-201ENST00000258787 3267 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
POLR3DP05423 DNMT3B-202ENST00000328111 4336 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
POLR3DP05423 MKL1-203ENST00000402042 4343 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
POLR3DP05423 ADCYAP1R1-207ENST00000614107 6575 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
POLR3DP05423 LINC01114-202ENST00000424321 2112 ntTSL 2 BASIC16.13■□□□□ 0.17
POLR3DP05423 PPP1R11-205ENST00000376772 1731 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
POLR3DP05423 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
POLR3DP05423 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
POLR3DP05423 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
POLR3DP05423 HRH2-202ENST00000377291 2561 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
POLR3DP05423 NEK4-202ENST00000383721 2576 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
POLR3DP05423 NAALADL1-201ENST00000340252 2376 ntTSL 5 BASIC16.13■□□□□ 0.17
POLR3DP05423 AMER1-202ENST00000374869 3688 ntTSL 5 BASIC16.13■□□□□ 0.17
POLR3DP05423 TTC38-201ENST00000381031 2610 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
POLR3DP05423 CEP112-202ENST00000392769 3517 ntAPPRIS P4 TSL 5 BASIC16.12■□□□□ 0.17
POLR3DP05423 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
POLR3DP05423 HMGCL-203ENST00000374490 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
POLR3DP05423 ICOSLG-202ENST00000400377 2907 ntTSL 2 BASIC16.12■□□□□ 0.17
POLR3DP05423 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
POLR3DP05423 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
POLR3DP05423 APOL5-201ENST00000249044 1438 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
POLR3DP05423 INVS-201ENST00000262456 2968 ntTSL 5 BASIC16.12■□□□□ 0.17
POLR3DP05423 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
POLR3DP05423 SPPL2B-209ENST00000613503 3456 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
POLR3DP05423 RECQL5-218ENST00000584999 1922 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
POLR3DP05423 KRT8P25-201ENST00000473150 1456 ntBASIC16.12■□□□□ 0.17
POLR3DP05423 TNNT3-201ENST00000278317 1210 ntAPPRIS P3 TSL 5 BASIC16.12■□□□□ 0.17
POLR3DP05423 HIST1H4B-201ENST00000377745 438 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
POLR3DP05423 TNNT3-207ENST00000381589 1060 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
POLR3DP05423 CACNG7-202ENST00000391766 631 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
POLR3DP05423 AL391832.2-203ENST00000423175 554 ntTSL 3 BASIC16.12■□□□□ 0.17
POLR3DP05423 NAA60-205ENST00000424546 1149 ntTSL 2 BASIC16.12■□□□□ 0.17
POLR3DP05423 SUMF2-210ENST00000437307 947 ntTSL 2 BASIC16.12■□□□□ 0.17
POLR3DP05423 AC244197.1-201ENST00000456494 951 ntBASIC16.12■□□□□ 0.17
POLR3DP05423 AL161668.2-201ENST00000531638 492 ntTSL 5 BASIC16.12■□□□□ 0.17
POLR3DP05423 TGFB3-204ENST00000556285 1280 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
POLR3DP05423 SHBG-210ENST00000572262 984 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 75.7 ms