Protein–RNA interactions for Protein: O95076

ALX3, Homeobox protein aristaless-like 3, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALX3O95076 GOSR2-233ENST00000640068 3103 ntTSL 5 BASIC12.08□□□□□ -0.48
ALX3O95076 INTS6L-206ENST00000639893 3904 ntTSL 5 BASIC12.08□□□□□ -0.48
ALX3O95076 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
ALX3O95076 CACNA2D2-202ENST00000360963 5272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
ALX3O95076 FLNA-203ENST00000369850 8382 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
ALX3O95076 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
ALX3O95076 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
ALX3O95076 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
ALX3O95076 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
ALX3O95076 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
ALX3O95076 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC12.08□□□□□ -0.48
ALX3O95076 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC12.08□□□□□ -0.48
ALX3O95076 CSF2RBP1-201ENST00000447905 391 ntBASIC12.08□□□□□ -0.48
ALX3O95076 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC12.08□□□□□ -0.48
ALX3O95076 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC12.08□□□□□ -0.48
ALX3O95076 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
ALX3O95076 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC12.08□□□□□ -0.48
ALX3O95076 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC12.08□□□□□ -0.48
ALX3O95076 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC12.08□□□□□ -0.48
ALX3O95076 CCNC-217ENST00000523985 958 ntTSL 2 BASIC12.08□□□□□ -0.48
ALX3O95076 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC12.08□□□□□ -0.48
ALX3O95076 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
ALX3O95076 NFATC2IP-206ENST00000568148 1157 ntTSL 2 BASIC12.08□□□□□ -0.48
ALX3O95076 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC12.08□□□□□ -0.48
ALX3O95076 TUFT1-202ENST00000368848 3033 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
ALX3O95076 MIER1-202ENST00000355977 3595 ntTSL 5 BASIC12.08□□□□□ -0.48
ALX3O95076 RAB18-208ENST00000611151 4931 ntTSL 5 BASIC12.08□□□□□ -0.48
ALX3O95076 PAX2-203ENST00000370296 4140 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
ALX3O95076 PAX2-205ENST00000428433 4126 ntTSL 5 BASIC12.08□□□□□ -0.48
ALX3O95076 DNMT3A-202ENST00000321117 4279 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
ALX3O95076 HNF1A-208ENST00000541395 3332 ntTSL 2 BASIC12.08□□□□□ -0.48
ALX3O95076 NCOR2-204ENST00000405201 8533 ntAPPRIS P4 TSL 1 (best) BASIC12.08□□□□□ -0.48
ALX3O95076 COL3A1-201ENST00000304636 5543 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
ALX3O95076 PROM2-201ENST00000317620 4728 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
ALX3O95076 AGAP12P-202ENST00000603888 2141 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
ALX3O95076 PHF21B-202ENST00000396103 3540 ntAPPRIS ALT2 TSL 2 BASIC12.08□□□□□ -0.48
ALX3O95076 ANKDD1A-201ENST00000319580 3110 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
ALX3O95076 LPXN-203ENST00000528954 1879 ntAPPRIS ALT2 TSL 2 BASIC12.08□□□□□ -0.48
ALX3O95076 OGFR-202ENST00000370461 4506 ntAPPRIS ALT2 TSL 2 BASIC12.08□□□□□ -0.48
ALX3O95076 ENKUR-202ENST00000376363 1318 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
ALX3O95076 GGPS1-202ENST00000358966 2740 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
ALX3O95076 STARD8-203ENST00000374599 4841 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
ALX3O95076 MVP-201ENST00000357402 2870 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
ALX3O95076 SLC5A10-201ENST00000317977 4436 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
ALX3O95076 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
ALX3O95076 BDNF-202ENST00000356660 4018 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
ALX3O95076 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
ALX3O95076 LEPR-201ENST00000344610 2935 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
ALX3O95076 ARL4C-201ENST00000339728 3385 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
ALX3O95076 ADGRG6-202ENST00000296932 6849 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
ALX3O95076 BORA-202ENST00000377815 1673 ntAPPRIS ALT2 TSL 2 BASIC12.07□□□□□ -0.48
ALX3O95076 XBP1-204ENST00000405219 1690 ntTSL 2 BASIC12.07□□□□□ -0.48
ALX3O95076 GGTA1P-202ENST00000481534 3429 ntTSL 2 BASIC12.07□□□□□ -0.48
ALX3O95076 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
ALX3O95076 OR2V2-202ENST00000641492 4777 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
ALX3O95076 ELMOD3-203ENST00000409013 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
ALX3O95076 KRT42P-201ENST00000398469 2864 ntTSL 2 BASIC12.07□□□□□ -0.48
ALX3O95076 SMTN-222ENST00000612341 3321 ntAPPRIS ALT2 TSL 2 BASIC12.07□□□□□ -0.48
ALX3O95076 STXBP5L-201ENST00000273666 9496 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
ALX3O95076 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC12.07□□□□□ -0.48
ALX3O95076 CAT-201ENST00000241052 2302 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
ALX3O95076 FHOD1-201ENST00000258201 3990 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
ALX3O95076 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
ALX3O95076 C14orf119-201ENST00000319074 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
ALX3O95076 KIAA0895-203ENST00000338533 4132 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
ALX3O95076 DHX30-201ENST00000348968 3994 ntTSL 5 BASIC12.07□□□□□ -0.48
ALX3O95076 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC12.07□□□□□ -0.48
ALX3O95076 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
ALX3O95076 AC021723.1-201ENST00000486306 515 ntBASIC12.07□□□□□ -0.48
ALX3O95076 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC12.07□□□□□ -0.48
ALX3O95076 SRP72-205ENST00000510663 2473 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
ALX3O95076 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC12.07□□□□□ -0.48
ALX3O95076 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC12.07□□□□□ -0.48
ALX3O95076 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC12.07□□□□□ -0.48
ALX3O95076 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC12.07□□□□□ -0.48
ALX3O95076 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
ALX3O95076 AC079328.1-201ENST00000560358 952 ntBASIC12.07□□□□□ -0.48
ALX3O95076 AC115099.1-201ENST00000570413 362 ntTSL 3 BASIC12.07□□□□□ -0.48
ALX3O95076 MIR3188-201ENST00000583494 85 ntBASIC12.07□□□□□ -0.48
ALX3O95076 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC12.07□□□□□ -0.48
ALX3O95076 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
ALX3O95076 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC12.07□□□□□ -0.48
ALX3O95076 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
ALX3O95076 AL136295.7-201ENST00000619226 1200 ntBASIC12.07□□□□□ -0.48
ALX3O95076 ABCC4-207ENST00000629385 2903 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
ALX3O95076 PCBP2-OT1-201ENST00000634357 590 ntBASIC12.07□□□□□ -0.48
ALX3O95076 SEC24B-201ENST00000265175 5083 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
ALX3O95076 PLB1-205ENST00000422425 5115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
ALX3O95076 REST-208ENST00000619101 7114 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
ALX3O95076 GATC-203ENST00000551765 4244 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
ALX3O95076 VPS52-218ENST00000482399 3338 ntTSL 2 BASIC12.07□□□□□ -0.48
ALX3O95076 SP7-202ENST00000536324 3151 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
ALX3O95076 AF013593.1-201ENST00000458074 1487 ntBASIC12.07□□□□□ -0.48
ALX3O95076 SESN3-203ENST00000536441 9558 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
ALX3O95076 DACT3-AS1-201ENST00000500689 1304 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
ALX3O95076 NBPF17P-201ENST00000401087 2119 ntBASIC12.07□□□□□ -0.48
ALX3O95076 ARHGAP24-203ENST00000395184 4661 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
ALX3O95076 LHFPL1-201ENST00000371968 1675 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
ALX3O95076 CYYR1-201ENST00000299340 3101 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
ALX3O95076 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 67.4 ms