Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 SAP18-201ENST00000382533 2298 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
NPIPB4C9JG80 SPAG5-AS1-201ENST00000414744 2143 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
NPIPB4C9JG80 RGS6-202ENST00000355512 1564 ntAPPRIS ALT1 TSL 1 (best) BASIC11.89□□□□□ -0.51
NPIPB4C9JG80 DRD3-204ENST00000467632 1554 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
NPIPB4C9JG80 PCDHA2-202ENST00000520672 3056 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
NPIPB4C9JG80 GK-203ENST00000378943 3707 ntAPPRIS ALT1 TSL 1 (best) BASIC11.89□□□□□ -0.51
NPIPB4C9JG80 CCDC3-202ENST00000378839 3180 ntAPPRIS ALT2 TSL 2 BASIC11.89□□□□□ -0.51
NPIPB4C9JG80 GTF2IRD2-201ENST00000451013 3558 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
NPIPB4C9JG80 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC11.89□□□□□ -0.51
NPIPB4C9JG80 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC11.89□□□□□ -0.51
NPIPB4C9JG80 CHEK2-203ENST00000382565 696 ntTSL 5 BASIC11.89□□□□□ -0.51
NPIPB4C9JG80 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC11.89□□□□□ -0.51
NPIPB4C9JG80 SNORA50D-201ENST00000408059 134 ntBASIC11.89□□□□□ -0.51
NPIPB4C9JG80 ID2-AS1-201ENST00000412712 953 ntTSL 5 BASIC11.89□□□□□ -0.51
NPIPB4C9JG80 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC11.89□□□□□ -0.51
NPIPB4C9JG80 LINC01022-201ENST00000415652 394 ntTSL 3 BASIC11.89□□□□□ -0.51
NPIPB4C9JG80 GGT8P-201ENST00000418938 532 ntBASIC11.89□□□□□ -0.51
NPIPB4C9JG80 PSAT1P2-201ENST00000426107 972 ntBASIC11.89□□□□□ -0.51
NPIPB4C9JG80 AL365295.1-203ENST00000435322 566 ntTSL 4 BASIC11.89□□□□□ -0.51
NPIPB4C9JG80 LAMTOR4-202ENST00000441173 730 ntTSL 2 BASIC11.89□□□□□ -0.51
NPIPB4C9JG80 RAB34-211ENST00000450529 1184 ntTSL 2 BASIC11.89□□□□□ -0.51
NPIPB4C9JG80 SOX2-OT-209ENST00000485035 561 ntTSL 4 BASIC11.89□□□□□ -0.51
NPIPB4C9JG80 PRDM2-213ENST00000503842 705 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
NPIPB4C9JG80 HNRNPA1P56-201ENST00000505767 954 ntBASIC11.89□□□□□ -0.51
NPIPB4C9JG80 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC11.89□□□□□ -0.51
NPIPB4C9JG80 ORMDL2-205ENST00000552672 760 ntTSL 2 BASIC11.89□□□□□ -0.51
NPIPB4C9JG80 CARHSP1-208ENST00000567554 598 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
NPIPB4C9JG80 DBP-202ENST00000593500 712 ntTSL 2 BASIC11.89□□□□□ -0.51
NPIPB4C9JG80 SOX2-OT-222ENST00000595084 853 ntTSL 5 BASIC11.89□□□□□ -0.51
NPIPB4C9JG80 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
NPIPB4C9JG80 CLPP-205ENST00000596605 646 ntTSL 2 BASIC11.89□□□□□ -0.51
NPIPB4C9JG80 SOX2-OT-232ENST00000600386 792 ntTSL 5 BASIC11.89□□□□□ -0.51
NPIPB4C9JG80 COQ4-204ENST00000608951 781 ntTSL 2 BASIC11.89□□□□□ -0.51
NPIPB4C9JG80 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC11.89□□□□□ -0.51
NPIPB4C9JG80 PSMD5-208ENST00000625444 219 ntTSL 5 BASIC11.89□□□□□ -0.51
NPIPB4C9JG80 SNORA50D-202ENST00000627561 132 ntBASIC11.89□□□□□ -0.51
NPIPB4C9JG80 ENTPD3-203ENST00000445129 1658 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
NPIPB4C9JG80 AC009133.3-201ENST00000565600 1656 ntTSL 5 BASIC11.89□□□□□ -0.51
NPIPB4C9JG80 HACD3-207ENST00000566074 1658 ntTSL 5 BASIC11.89□□□□□ -0.51
NPIPB4C9JG80 AC138150.2-201ENST00000589796 2053 ntTSL 2 BASIC11.89□□□□□ -0.51
NPIPB4C9JG80 BTRC-203ENST00000393441 6084 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
NPIPB4C9JG80 STMN1-206ENST00000455785 1504 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
NPIPB4C9JG80 LINC00675-202ENST00000581851 1530 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
NPIPB4C9JG80 INVS-201ENST00000262456 2968 ntTSL 5 BASIC11.89□□□□□ -0.51
NPIPB4C9JG80 AC034205.3-201ENST00000603595 1376 ntBASIC11.89□□□□□ -0.51
NPIPB4C9JG80 SLC46A1-208ENST00000618626 5363 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
NPIPB4C9JG80 TRMT10B-203ENST00000377754 1881 ntTSL 2 BASIC11.89□□□□□ -0.51
NPIPB4C9JG80 Z97192.2-201ENST00000393264 2379 ntTSL 2 BASIC11.89□□□□□ -0.51
NPIPB4C9JG80 GTF2F2-201ENST00000340473 2239 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
NPIPB4C9JG80 SGSM3-201ENST00000248929 2969 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
NPIPB4C9JG80 TMEM177-202ENST00000401466 1346 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
NPIPB4C9JG80 DBF4B-202ENST00000393547 1810 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
NPIPB4C9JG80 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
NPIPB4C9JG80 BCAS3-221ENST00000588874 2948 ntAPPRIS ALT2 TSL 2 BASIC11.88□□□□□ -0.51
NPIPB4C9JG80 SEPT6-201ENST00000343984 2693 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
NPIPB4C9JG80 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
NPIPB4C9JG80 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
NPIPB4C9JG80 GRIN1-202ENST00000371546 4114 ntTSL 5 BASIC11.88□□□□□ -0.51
NPIPB4C9JG80 CYP11B1-203ENST00000377675 2280 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
NPIPB4C9JG80 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
NPIPB4C9JG80 C19orf12-209ENST00000623113 4242 ntTSL 2 BASIC11.88□□□□□ -0.51
NPIPB4C9JG80 TRAPPC4-214ENST00000533632 1759 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
NPIPB4C9JG80 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC11.88□□□□□ -0.51
NPIPB4C9JG80 PRDM11-204ENST00000530656 1536 ntAPPRIS ALT2 TSL 2 BASIC11.88□□□□□ -0.51
NPIPB4C9JG80 ZNF215-207ENST00000610573 1503 ntTSL 5 BASIC11.88□□□□□ -0.51
NPIPB4C9JG80 PRDX1-202ENST00000319248 1021 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
NPIPB4C9JG80 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC11.88□□□□□ -0.51
NPIPB4C9JG80 CUTA-203ENST00000374500 937 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
NPIPB4C9JG80 RPS7-202ENST00000403564 764 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
NPIPB4C9JG80 FAM126A-201ENST00000409763 616 ntTSL 2 BASIC11.88□□□□□ -0.51
NPIPB4C9JG80 FAM21EP-201ENST00000417804 985 ntBASIC11.88□□□□□ -0.51
NPIPB4C9JG80 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
NPIPB4C9JG80 GNG10P1-201ENST00000452289 199 ntBASIC11.88□□□□□ -0.51
NPIPB4C9JG80 TPI1-206ENST00000488464 791 ntTSL 5 BASIC11.88□□□□□ -0.51
NPIPB4C9JG80 PFN2-212ENST00000490975 858 ntTSL 4 BASIC11.88□□□□□ -0.51
NPIPB4C9JG80 LINC01475-201ENST00000548010 766 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
NPIPB4C9JG80 PPCDC-206ENST00000564923 757 ntTSL 5 BASIC11.88□□□□□ -0.51
NPIPB4C9JG80 AIPL1-210ENST00000576307 1077 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
NPIPB4C9JG80 SPACA3-205ENST00000580599 949 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
NPIPB4C9JG80 U62317.3-201ENST00000608319 855 ntBASIC11.88□□□□□ -0.51
NPIPB4C9JG80 MFSD12-215ENST00000615613 688 ntBASIC11.88□□□□□ -0.51
NPIPB4C9JG80 CRABP2-204ENST00000621784 1033 ntAPPRIS P1 TSL 3 BASIC11.88□□□□□ -0.51
NPIPB4C9JG80 AC128714.1-201ENST00000637035 887 ntBASIC11.88□□□□□ -0.51
NPIPB4C9JG80 FAM13B-203ENST00000425075 3098 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
NPIPB4C9JG80 CNGB1-202ENST00000311183 1633 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
NPIPB4C9JG80 RNF121-211ENST00000530137 2202 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
NPIPB4C9JG80 PRRT3-203ENST00000412055 3761 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
NPIPB4C9JG80 SUCO-202ENST00000367723 5916 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
NPIPB4C9JG80 ASMT-203ENST00000381241 1388 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
NPIPB4C9JG80 AC244453.2-201ENST00000457996 3543 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
NPIPB4C9JG80 ZNF143-203ENST00000396602 2947 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
NPIPB4C9JG80 AL390066.1-201ENST00000456414 2302 ntTSL 2 BASIC11.88□□□□□ -0.51
NPIPB4C9JG80 DDX31-202ENST00000372153 3285 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
NPIPB4C9JG80 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
NPIPB4C9JG80 EFHC1-224ENST00000636702 2197 ntTSL 5 BASIC11.88□□□□□ -0.51
NPIPB4C9JG80 FAM156B-201ENST00000416841 2537 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
NPIPB4C9JG80 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC11.88□□□□□ -0.51
NPIPB4C9JG80 GNG4-201ENST00000366597 1595 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
NPIPB4C9JG80 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
NPIPB4C9JG80 SMARCA4-202ENST00000413806 5512 ntTSL 5 BASIC11.88□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms