Protein–RNA interactions for Protein: Q9C030

TRIM6, Tripartite motif-containing protein 6, humanhuman

Predicted RBP Predictions only

Length 488 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6Q9C030 LINC02171-201ENST00000508619 1033 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TRIM6Q9C030 TMEM123-208ENST00000532161 743 ntAPPRIS ALT2 TSL 3 BASIC14.94□□□□□ -0.02
TRIM6Q9C030 AC012379.2-201ENST00000560237 765 ntTSL 2 BASIC14.94□□□□□ -0.02
TRIM6Q9C030 PPCDC-206ENST00000564923 757 ntTSL 5 BASIC14.94□□□□□ -0.02
TRIM6Q9C030 PSMA6-215ENST00000622405 978 ntTSL 2 BASIC14.94□□□□□ -0.02
TRIM6Q9C030 AQP7P3-201ENST00000624547 1041 ntBASIC14.94□□□□□ -0.02
TRIM6Q9C030 PSMA6-217ENST00000628955 364 ntTSL 5 BASIC14.94□□□□□ -0.02
TRIM6Q9C030 AC002472.4-201ENST00000641915 272 ntBASIC14.94□□□□□ -0.02
TRIM6Q9C030 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TRIM6Q9C030 KCNJ9-201ENST00000368088 4170 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRIM6Q9C030 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC14.94□□□□□ -0.02
TRIM6Q9C030 PELP1-201ENST00000301396 3673 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRIM6Q9C030 DNAJB6-204ENST00000429029 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRIM6Q9C030 NOX5-202ENST00000388866 2804 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TRIM6Q9C030 SHANK2-202ENST00000357171 1373 ntTSL 5 BASIC14.94□□□□□ -0.02
TRIM6Q9C030 AL109809.1-201ENST00000418979 1367 ntBASIC14.94□□□□□ -0.02
TRIM6Q9C030 UBE2A-206ENST00000625938 1381 ntTSL 2 BASIC14.94□□□□□ -0.02
TRIM6Q9C030 CACNA1G-232ENST00000515411 6960 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRIM6Q9C030 CACNA1G-233ENST00000515765 6981 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRIM6Q9C030 TP73-211ENST00000604074 4806 ntTSL 5 BASIC14.94□□□□□ -0.02
TRIM6Q9C030 ATP6V0A1-206ENST00000585525 2679 ntTSL 2 BASIC14.94□□□□□ -0.02
TRIM6Q9C030 EPB42-203ENST00000540029 2098 ntTSL 2 BASIC14.94□□□□□ -0.02
TRIM6Q9C030 NSD2-204ENST00000382891 7534 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
TRIM6Q9C030 AMER2-201ENST00000357816 10055 ntTSL 2 BASIC14.94□□□□□ -0.02
TRIM6Q9C030 PRAME-205ENST00000405655 2179 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRIM6Q9C030 SOAT1-204ENST00000540564 6861 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TRIM6Q9C030 RGS22-201ENST00000360863 4296 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRIM6Q9C030 LANCL1-205ENST00000443314 4781 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRIM6Q9C030 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TRIM6Q9C030 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC14.93□□□□□ -0.02
TRIM6Q9C030 FAM118A-201ENST00000216214 3458 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
TRIM6Q9C030 MYRIP-204ENST00000444716 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRIM6Q9C030 URGCP-207ENST00000453200 4042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRIM6Q9C030 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRIM6Q9C030 OXSM-201ENST00000280701 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRIM6Q9C030 AOC1-204ENST00000467291 2857 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
TRIM6Q9C030 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRIM6Q9C030 HMOX2-201ENST00000219700 1621 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
TRIM6Q9C030 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRIM6Q9C030 WASHC2C-210ENST00000623400 4616 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRIM6Q9C030 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
TRIM6Q9C030 ZNF263-202ENST00000538765 1721 ntTSL 2 BASIC14.93□□□□□ -0.02
TRIM6Q9C030 TNS2-203ENST00000379902 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRIM6Q9C030 PGLYRP3-201ENST00000290722 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRIM6Q9C030 INO80C-202ENST00000334598 974 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRIM6Q9C030 FAM213A-204ENST00000372188 829 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
TRIM6Q9C030 IGHV5-51-201ENST00000390626 410 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
TRIM6Q9C030 AL512599.1-201ENST00000430724 685 ntBASIC14.93□□□□□ -0.02
TRIM6Q9C030 BX322557.2-201ENST00000445242 379 ntTSL 3 BASIC14.93□□□□□ -0.02
TRIM6Q9C030 C17orf58-202ENST00000449250 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRIM6Q9C030 SOX2-OT-209ENST00000485035 561 ntTSL 4 BASIC14.93□□□□□ -0.02
TRIM6Q9C030 PRSS55-203ENST00000522210 1005 ntTSL 2 BASIC14.93□□□□□ -0.02
TRIM6Q9C030 SOX2-OT-222ENST00000595084 853 ntTSL 5 BASIC14.93□□□□□ -0.02
TRIM6Q9C030 SOX2-OT-232ENST00000600386 792 ntTSL 5 BASIC14.93□□□□□ -0.02
TRIM6Q9C030 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRIM6Q9C030 CXorf40A-212ENST00000514208 1840 ntAPPRIS ALT1 TSL 5 BASIC14.93□□□□□ -0.02
TRIM6Q9C030 FBXL18-201ENST00000382368 3498 ntAPPRIS P2 TSL 5 BASIC14.93□□□□□ -0.02
TRIM6Q9C030 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRIM6Q9C030 NOTCH1-201ENST00000277541 9371 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRIM6Q9C030 HOXA7-201ENST00000242159 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRIM6Q9C030 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRIM6Q9C030 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TRIM6Q9C030 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TRIM6Q9C030 AAR2-202ENST00000373932 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRIM6Q9C030 AL672207.1-201ENST00000328462 1570 ntBASIC14.93□□□□□ -0.02
TRIM6Q9C030 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRIM6Q9C030 FAM156A-208ENST00000615092 2098 ntAPPRIS P2 TSL 5 BASIC14.93□□□□□ -0.02
TRIM6Q9C030 CAMKV-201ENST00000296471 2913 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TRIM6Q9C030 TMEM254-213ENST00000613758 2154 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TRIM6Q9C030 C7orf49-214ENST00000620897 1349 ntTSL 3 BASIC14.92□□□□□ -0.02
TRIM6Q9C030 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC14.92□□□□□ -0.02
TRIM6Q9C030 Z84468.1-201ENST00000626321 1408 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TRIM6Q9C030 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRIM6Q9C030 GRM4-203ENST00000455714 2574 ntTSL 2 BASIC14.92□□□□□ -0.02
TRIM6Q9C030 EIF4G1-207ENST00000411531 4683 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TRIM6Q9C030 DRD3-202ENST00000383673 1640 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRIM6Q9C030 MAP7D2-201ENST00000379643 3918 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRIM6Q9C030 AC004846.1-201ENST00000554614 3050 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TRIM6Q9C030 HFE-202ENST00000317896 1922 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TRIM6Q9C030 BAK1-203ENST00000442998 2212 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TRIM6Q9C030 DEDD-202ENST00000368006 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRIM6Q9C030 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TRIM6Q9C030 CCDC88A-204ENST00000413716 9586 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TRIM6Q9C030 LINC01749-202ENST00000607802 3408 ntTSL 2 BASIC14.92□□□□□ -0.02
TRIM6Q9C030 RHOC-205ENST00000369636 786 ntTSL 2 BASIC14.92□□□□□ -0.02
TRIM6Q9C030 RHOC-207ENST00000369638 1028 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
TRIM6Q9C030 UQCC2-201ENST00000374214 432 ntTSL 5 BASIC14.92□□□□□ -0.02
TRIM6Q9C030 SMIM29-202ENST00000394990 792 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TRIM6Q9C030 RPL10-203ENST00000406022 748 ntTSL 3 BASIC14.92□□□□□ -0.02
TRIM6Q9C030 AL590093.1-201ENST00000416119 623 ntTSL 5 BASIC14.92□□□□□ -0.02
TRIM6Q9C030 OR51A9P-201ENST00000422578 911 ntBASIC14.92□□□□□ -0.02
TRIM6Q9C030 AC061961.1-201ENST00000443901 432 ntTSL 3 BASIC14.92□□□□□ -0.02
TRIM6Q9C030 AL135901.1-201ENST00000451812 333 ntBASIC14.92□□□□□ -0.02
TRIM6Q9C030 AC022113.2-201ENST00000504935 704 ntTSL 3 BASIC14.92□□□□□ -0.02
TRIM6Q9C030 AC003982.2-201ENST00000536933 365 ntTSL 3 BASIC14.92□□□□□ -0.02
TRIM6Q9C030 INCA1-203ENST00000575780 1221 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRIM6Q9C030 AL160191.2-201ENST00000603975 601 ntBASIC14.92□□□□□ -0.02
TRIM6Q9C030 REXO1L1P-201ENST00000379010 6598 ntBASIC14.92□□□□□ -0.02
TRIM6Q9C030 AL513315.1-201ENST00000640756 1370 ntTSL 5 BASIC14.92□□□□□ -0.02
TRIM6Q9C030 KDELR1-201ENST00000330720 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 91.8 ms