Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 AC022784.6-203ENST00000520255 863 ntTSL 3 BASIC8.61□□□□□ -1.03
VPS13DQ5THJ4 DHRS7-202ENST00000536410 1194 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
VPS13DQ5THJ4 SLC39A9-210ENST00000557046 855 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
VPS13DQ5THJ4 PRSS2-206ENST00000633969 852 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
VPS13DQ5THJ4 FBXO39-201ENST00000321535 1677 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
VPS13DQ5THJ4 FAM122C-203ENST00000414371 2119 ntAPPRIS ALT2 TSL 5 BASIC8.6□□□□□ -1.03
VPS13DQ5THJ4 AAAS-201ENST00000209873 1840 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
VPS13DQ5THJ4 PRR3-202ENST00000376560 2254 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
VPS13DQ5THJ4 CSF2RA-208ENST00000417535 1955 ntAPPRIS ALT2 TSL 5 BASIC8.6□□□□□ -1.03
VPS13DQ5THJ4 ZNF772-209ENST00000615214 1506 ntTSL 5 BASIC8.6□□□□□ -1.03
VPS13DQ5THJ4 ENO2-205ENST00000535366 2827 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
VPS13DQ5THJ4 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
VPS13DQ5THJ4 ROPN1B-201ENST00000251776 1026 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
VPS13DQ5THJ4 C3orf18-202ENST00000422619 551 ntTSL 4 BASIC8.6□□□□□ -1.03
VPS13DQ5THJ4 AC005838.1-201ENST00000430712 233 ntBASIC8.6□□□□□ -1.03
VPS13DQ5THJ4 RN7SL521P-201ENST00000488398 297 ntBASIC8.6□□□□□ -1.03
VPS13DQ5THJ4 AL645949.2-201ENST00000513434 786 ntBASIC8.6□□□□□ -1.03
VPS13DQ5THJ4 CHCHD10-204ENST00000520222 384 ntTSL 3 BASIC8.6□□□□□ -1.03
VPS13DQ5THJ4 AC078925.1-201ENST00000535370 568 ntTSL 2 BASIC8.6□□□□□ -1.03
VPS13DQ5THJ4 ATP6V1D-209ENST00000555431 1085 ntTSL 5 BASIC8.6□□□□□ -1.03
VPS13DQ5THJ4 ATP6V1D-210ENST00000555474 1102 ntTSL 5 BASIC8.6□□□□□ -1.03
VPS13DQ5THJ4 CHORDC2P-201ENST00000557601 1090 ntBASIC8.6□□□□□ -1.03
VPS13DQ5THJ4 AC005086.1-201ENST00000566572 801 ntTSL 5 BASIC8.6□□□□□ -1.03
VPS13DQ5THJ4 AC006111.1-201ENST00000573982 329 ntTSL 3 BASIC8.6□□□□□ -1.03
VPS13DQ5THJ4 SH3GL1P2-201ENST00000582245 1082 ntBASIC8.6□□□□□ -1.03
VPS13DQ5THJ4 AL589843.2-202ENST00000602289 740 ntBASIC8.6□□□□□ -1.03
VPS13DQ5THJ4 AL137028.1-201ENST00000620521 555 ntBASIC8.6□□□□□ -1.03
VPS13DQ5THJ4 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
VPS13DQ5THJ4 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
VPS13DQ5THJ4 MANBAL-201ENST00000373605 1915 ntAPPRIS P1 TSL 2 BASIC8.6□□□□□ -1.03
VPS13DQ5THJ4 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
VPS13DQ5THJ4 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC8.6□□□□□ -1.03
VPS13DQ5THJ4 SPO11-201ENST00000345868 1666 ntAPPRIS ALT1 TSL 1 (best) BASIC8.6□□□□□ -1.03
VPS13DQ5THJ4 SPRYD3-204ENST00000547837 1655 ntTSL 5 BASIC8.6□□□□□ -1.03
VPS13DQ5THJ4 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
VPS13DQ5THJ4 ZCWPW1-208ENST00000490721 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC8.6□□□□□ -1.03
VPS13DQ5THJ4 AL590683.1-201ENST00000439059 1849 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
VPS13DQ5THJ4 AL391987.4-201ENST00000377547 439 ntTSL 3 BASIC8.6□□□□□ -1.03
VPS13DQ5THJ4 MTND6P9-201ENST00000458075 519 ntBASIC8.6□□□□□ -1.03
VPS13DQ5THJ4 AC096919.1-201ENST00000472730 652 ntBASIC8.6□□□□□ -1.03
VPS13DQ5THJ4 ATP6V0CP1-201ENST00000482495 618 ntBASIC8.6□□□□□ -1.03
VPS13DQ5THJ4 AC023078.3-201ENST00000527463 958 ntBASIC8.6□□□□□ -1.03
VPS13DQ5THJ4 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
VPS13DQ5THJ4 RBM39-243ENST00000528062 2421 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
VPS13DQ5THJ4 KCNV1-201ENST00000297404 2927 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
VPS13DQ5THJ4 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC8.6□□□□□ -1.03
VPS13DQ5THJ4 TTC4-201ENST00000371281 2395 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
VPS13DQ5THJ4 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC8.6□□□□□ -1.03
VPS13DQ5THJ4 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC8.6□□□□□ -1.03
VPS13DQ5THJ4 OR8J1-202ENST00000533152 1320 ntAPPRIS P1 BASIC8.6□□□□□ -1.03
VPS13DQ5THJ4 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC8.6□□□□□ -1.03
VPS13DQ5THJ4 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
VPS13DQ5THJ4 IGLV3-22-201ENST00000390307 409 ntAPPRIS P1 BASIC8.6□□□□□ -1.03
VPS13DQ5THJ4 AC006022.1-201ENST00000425261 388 ntBASIC8.6□□□□□ -1.03
VPS13DQ5THJ4 HOPX-209ENST00000508121 904 ntAPPRIS P1 TSL 2 BASIC8.6□□□□□ -1.03
VPS13DQ5THJ4 MIOXP1-201ENST00000521205 835 ntBASIC8.6□□□□□ -1.03
VPS13DQ5THJ4 AP003469.2-201ENST00000524369 430 ntTSL 3 BASIC8.6□□□□□ -1.03
VPS13DQ5THJ4 AP000439.1-201ENST00000544004 581 ntTSL 4 BASIC8.6□□□□□ -1.03
VPS13DQ5THJ4 AC079601.2-201ENST00000547729 775 ntBASIC8.6□□□□□ -1.03
VPS13DQ5THJ4 IGHV1OR16-2-201ENST00000564937 349 ntBASIC8.6□□□□□ -1.03
VPS13DQ5THJ4 AC140658.2-201ENST00000566360 348 ntBASIC8.6□□□□□ -1.03
VPS13DQ5THJ4 MAPT-IT1-201ENST00000624111 3016 ntBASIC8.6□□□□□ -1.03
VPS13DQ5THJ4 PPARA-202ENST00000402126 1558 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
VPS13DQ5THJ4 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
VPS13DQ5THJ4 AHCY-205ENST00000538132 2366 ntTSL 2 BASIC8.6□□□□□ -1.03
VPS13DQ5THJ4 USP36-202ENST00000449938 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC8.6□□□□□ -1.03
VPS13DQ5THJ4 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC8.6□□□□□ -1.03
VPS13DQ5THJ4 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
VPS13DQ5THJ4 MIR22HG-208ENST00000574306 2626 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
VPS13DQ5THJ4 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
VPS13DQ5THJ4 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
VPS13DQ5THJ4 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC8.59□□□□□ -1.03
VPS13DQ5THJ4 HIST1H1E-201ENST00000304218 754 ntAPPRIS P1 BASIC8.59□□□□□ -1.03
VPS13DQ5THJ4 RARRES3-202ENST00000354445 696 ntAPPRIS ALT2 TSL 5 BASIC8.59□□□□□ -1.03
VPS13DQ5THJ4 KRTAP4-2-201ENST00000377726 763 ntAPPRIS P1 BASIC8.59□□□□□ -1.03
VPS13DQ5THJ4 KRT41P-201ENST00000393988 1293 ntBASIC8.59□□□□□ -1.03
VPS13DQ5THJ4 HNRNPA1P46-201ENST00000411735 937 ntBASIC8.59□□□□□ -1.03
VPS13DQ5THJ4 ACTG1P10-201ENST00000428275 1082 ntBASIC8.59□□□□□ -1.03
VPS13DQ5THJ4 LINC01287-203ENST00000454441 1007 ntTSL 5 BASIC8.59□□□□□ -1.03
VPS13DQ5THJ4 LINC00332-201ENST00000455241 834 ntTSL 3 BASIC8.59□□□□□ -1.03
VPS13DQ5THJ4 SSR3-202ENST00000463503 596 ntTSL 4 BASIC8.59□□□□□ -1.03
VPS13DQ5THJ4 PTDSS1-206ENST00000522072 1112 ntTSL 2 BASIC8.59□□□□□ -1.03
VPS13DQ5THJ4 AC002351.1-201ENST00000546852 590 ntTSL 2 BASIC8.59□□□□□ -1.03
VPS13DQ5THJ4 AC104041.1-202ENST00000560097 566 ntTSL 4 BASIC8.59□□□□□ -1.03
VPS13DQ5THJ4 AC087190.3-201ENST00000562893 753 ntTSL 3 BASIC8.59□□□□□ -1.03
VPS13DQ5THJ4 AL157791.2-201ENST00000604758 478 ntBASIC8.59□□□□□ -1.03
VPS13DQ5THJ4 IMPDH1P8-201ENST00000413639 1525 ntBASIC8.59□□□□□ -1.03
VPS13DQ5THJ4 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC8.59□□□□□ -1.03
VPS13DQ5THJ4 BRSK1-206ENST00000590333 2977 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
VPS13DQ5THJ4 PPP1R32-203ENST00000432063 1472 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
VPS13DQ5THJ4 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
VPS13DQ5THJ4 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
VPS13DQ5THJ4 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
VPS13DQ5THJ4 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC8.59□□□□□ -1.03
VPS13DQ5THJ4 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC8.59□□□□□ -1.03
VPS13DQ5THJ4 IFT43-202ENST00000314067 833 ntAPPRIS P1 TSL 2 BASIC8.59□□□□□ -1.03
VPS13DQ5THJ4 HSPB11-204ENST00000371378 894 ntTSL 3 BASIC8.59□□□□□ -1.03
VPS13DQ5THJ4 IGLV1-44-201ENST00000390297 467 ntAPPRIS P1 BASIC8.59□□□□□ -1.03
VPS13DQ5THJ4 AP001341.1-201ENST00000409758 763 ntTSL 3 BASIC8.59□□□□□ -1.03
VPS13DQ5THJ4 LINC01128-201ENST00000415295 894 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Retrieved 100 of 98,524 protein–RNA pairs in 74.4 ms