Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 DDX54-202ENST00000314045 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
RFC3P40938 L3MBTL1-204ENST00000418998 3365 ntAPPRIS ALT2 TSL 2 BASIC12.46□□□□□ -0.42
RFC3P40938 SDR16C5-202ENST00000396721 2399 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
RFC3P40938 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
RFC3P40938 SFI1-229ENST00000540643 4226 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
RFC3P40938 TUBGCP4-201ENST00000260383 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
RFC3P40938 TTC38-201ENST00000381031 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
RFC3P40938 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC12.45□□□□□ -0.42
RFC3P40938 NCOR2-208ENST00000429285 8475 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
RFC3P40938 CAMKV-201ENST00000296471 2913 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
RFC3P40938 FKBP4P8-201ENST00000610931 1369 ntBASIC12.45□□□□□ -0.42
RFC3P40938 AL513315.1-201ENST00000640756 1370 ntTSL 5 BASIC12.45□□□□□ -0.42
RFC3P40938 COL20A1-203ENST00000422202 8097 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
RFC3P40938 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
RFC3P40938 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC12.45□□□□□ -0.42
RFC3P40938 SLC22A20-202ENST00000525437 3196 ntTSL 5 BASIC12.45□□□□□ -0.42
RFC3P40938 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
RFC3P40938 DNAJB13-201ENST00000339764 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
RFC3P40938 AC020658.7-201ENST00000624274 2442 ntBASIC12.45□□□□□ -0.42
RFC3P40938 SYNE3-201ENST00000334258 3275 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
RFC3P40938 LCE2C-201ENST00000368783 614 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
RFC3P40938 HMGCLL1-203ENST00000370850 1171 ntTSL 2 BASIC12.45□□□□□ -0.42
RFC3P40938 SURF4-203ENST00000371991 715 ntTSL 3 BASIC12.45□□□□□ -0.42
RFC3P40938 TSC22D3-202ENST00000372382 1216 ntTSL 3 BASIC12.45□□□□□ -0.42
RFC3P40938 CAMKK2-204ENST00000392473 2967 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
RFC3P40938 KCNE1-203ENST00000399286 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
RFC3P40938 AC104961.1-201ENST00000427605 771 ntBASIC12.45□□□□□ -0.42
RFC3P40938 IGLV9-49-201ENST00000427632 409 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
RFC3P40938 ARSEP1-202ENST00000430152 499 ntTSL 3 BASIC12.45□□□□□ -0.42
RFC3P40938 HNRNPA1P2-207ENST00000432375 960 ntBASIC12.45□□□□□ -0.42
RFC3P40938 AGPAT5P1-201ENST00000455855 1019 ntBASIC12.45□□□□□ -0.42
RFC3P40938 RN7SL288P-201ENST00000490496 291 ntBASIC12.45□□□□□ -0.42
RFC3P40938 AC113391.2-201ENST00000512245 553 ntTSL 4 BASIC12.45□□□□□ -0.42
RFC3P40938 MRPS36-204ENST00000512880 1200 ntTSL 5 BASIC12.45□□□□□ -0.42
RFC3P40938 SHBG-210ENST00000572262 984 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
RFC3P40938 AC068152.1-205ENST00000575173 1081 ntTSL 3 BASIC12.45□□□□□ -0.42
RFC3P40938 MRPS36-205ENST00000602380 1200 ntTSL 2 BASIC12.45□□□□□ -0.42
RFC3P40938 AL356417.2-202ENST00000608986 532 ntTSL 3 BASIC12.45□□□□□ -0.42
RFC3P40938 STAG3L1-204ENST00000619870 1192 ntTSL 2 BASIC12.45□□□□□ -0.42
RFC3P40938 RARS-210ENST00000626454 177 ntTSL 5 BASIC12.45□□□□□ -0.42
RFC3P40938 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC12.45□□□□□ -0.42
RFC3P40938 CRELD1-202ENST00000383811 2696 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
RFC3P40938 CTSV-201ENST00000259470 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
RFC3P40938 FAM156A-208ENST00000615092 2098 ntAPPRIS P2 TSL 5 BASIC12.45□□□□□ -0.42
RFC3P40938 ASAP3-202ENST00000437606 2865 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
RFC3P40938 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
RFC3P40938 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC12.45□□□□□ -0.42
RFC3P40938 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
RFC3P40938 ETNPPL-202ENST00000411864 2028 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
RFC3P40938 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
RFC3P40938 PAX5-204ENST00000377852 1472 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
RFC3P40938 SERPINH1-205ENST00000525876 2283 ntTSL 2 BASIC12.45□□□□□ -0.42
RFC3P40938 SYK-203ENST00000375751 4936 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
RFC3P40938 MEG3-213ENST00000455531 4867 ntTSL 2 BASIC12.45□□□□□ -0.42
RFC3P40938 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC12.45□□□□□ -0.42
RFC3P40938 AL121827.1-201ENST00000370257 3264 ntTSL 2 BASIC12.45□□□□□ -0.42
RFC3P40938 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
RFC3P40938 AC092115.1-201ENST00000566277 1402 ntBASIC12.45□□□□□ -0.42
RFC3P40938 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
RFC3P40938 HSPH1-202ENST00000380405 3480 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
RFC3P40938 GMEB2-203ENST00000370077 4223 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
RFC3P40938 TMEM254-213ENST00000613758 2154 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
RFC3P40938 TKFC-201ENST00000394900 4696 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
RFC3P40938 SLC7A8-214ENST00000621729 1371 ntTSL 5 BASIC12.44□□□□□ -0.42
RFC3P40938 HRH2-202ENST00000377291 2561 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
RFC3P40938 RPL31-207ENST00000409711 2328 ntTSL 2 BASIC12.44□□□□□ -0.42
RFC3P40938 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
RFC3P40938 CCNB2-201ENST00000288207 1556 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
RFC3P40938 STXBP1-202ENST00000373302 3967 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
RFC3P40938 PSMC4-202ENST00000455878 1333 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
RFC3P40938 CCT6P3-201ENST00000419314 3702 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
RFC3P40938 ADGRG3-201ENST00000333493 2728 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
RFC3P40938 AC072061.1-201ENST00000569710 2234 ntBASIC12.44□□□□□ -0.42
RFC3P40938 MKL1-203ENST00000402042 4343 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
RFC3P40938 MIR9-3HG-201ENST00000536780 4778 ntTSL 3 BASIC12.44□□□□□ -0.42
RFC3P40938 IGLJ3-201ENST00000390324 176 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
RFC3P40938 SNU13-204ENST00000402458 462 ntTSL 3 BASIC12.44□□□□□ -0.42
RFC3P40938 AP001628.2-201ENST00000420273 784 ntTSL 2 BASIC12.44□□□□□ -0.42
RFC3P40938 KCNK16-204ENST00000437525 981 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
RFC3P40938 FAM138B-202ENST00000446648 1130 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
RFC3P40938 FAM138C-202ENST00000449442 1126 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
RFC3P40938 LRRC75A-AS1-213ENST00000484836 821 ntTSL 2 BASIC12.44□□□□□ -0.42
RFC3P40938 TBC1D3P6-201ENST00000505954 962 ntBASIC12.44□□□□□ -0.42
RFC3P40938 NMNAT3-213ENST00000512391 794 ntTSL 3 BASIC12.44□□□□□ -0.42
RFC3P40938 SMUG1-221ENST00000514196 553 ntTSL 4 BASIC12.44□□□□□ -0.42
RFC3P40938 MYL6-218ENST00000550697 901 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
RFC3P40938 CR383656.13-201ENST00000550928 563 ntTSL 3 BASIC12.44□□□□□ -0.42
RFC3P40938 AL512310.10-201ENST00000555580 563 ntTSL 3 BASIC12.44□□□□□ -0.42
RFC3P40938 LINC02252-201ENST00000565706 487 ntTSL 3 BASIC12.44□□□□□ -0.42
RFC3P40938 AL022344.2-201ENST00000568976 968 ntBASIC12.44□□□□□ -0.42
RFC3P40938 MIR3940-201ENST00000579148 102 ntBASIC12.44□□□□□ -0.42
RFC3P40938 ANKRD20A21P-201ENST00000611282 517 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
RFC3P40938 MYOZ3-209ENST00000615557 1031 ntTSL 2 BASIC12.44□□□□□ -0.42
RFC3P40938 AC073869.4-201ENST00000620841 800 ntBASIC12.44□□□□□ -0.42
RFC3P40938 FAM138F-201ENST00000631376 1183 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
RFC3P40938 OSMR-AS1-204ENST00000636516 850 ntTSL 5 BASIC12.44□□□□□ -0.42
RFC3P40938 SERPINA13P-201ENST00000469935 1718 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
RFC3P40938 DLGAP1-202ENST00000400145 2188 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
RFC3P40938 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
RFC3P40938 LAIR1-201ENST00000348231 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms