Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 SMIM17-201ENST00000598409 1076 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
PDE6BP35913 AL117379.1-201ENST00000619319 677 ntBASIC16.41■□□□□ 0.22
PDE6BP35913 AC116631.1-201ENST00000640685 576 ntTSL 5 BASIC16.41■□□□□ 0.22
PDE6BP35913 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
PDE6BP35913 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
PDE6BP35913 LAMP2-201ENST00000200639 1867 ntAPPRIS P5 TSL 1 (best) BASIC16.41■□□□□ 0.22
PDE6BP35913 AC152010.1-201ENST00000415779 2006 ntBASIC16.41■□□□□ 0.22
PDE6BP35913 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
PDE6BP35913 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PDE6BP35913 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PDE6BP35913 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC16.41■□□□□ 0.22
PDE6BP35913 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PDE6BP35913 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC16.41■□□□□ 0.22
PDE6BP35913 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
PDE6BP35913 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC16.41■□□□□ 0.22
PDE6BP35913 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
PDE6BP35913 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PDE6BP35913 FUK-202ENST00000378912 3925 ntTSL 2 BASIC16.4■□□□□ 0.22
PDE6BP35913 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PDE6BP35913 DLGAP1-AS1-201ENST00000317114 1966 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PDE6BP35913 FMR1-218ENST00000621447 1832 ntTSL 3 BASIC16.4■□□□□ 0.22
PDE6BP35913 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
PDE6BP35913 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
PDE6BP35913 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PDE6BP35913 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PDE6BP35913 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PDE6BP35913 TMEM79-202ENST00000357501 975 ntTSL 3 BASIC16.4■□□□□ 0.22
PDE6BP35913 LY6G6F-201ENST00000375832 920 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PDE6BP35913 COX4I2-201ENST00000376075 693 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PDE6BP35913 HYKK-201ENST00000388988 1235 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
PDE6BP35913 THAP4-203ENST00000402545 833 ntTSL 5 BASIC16.4■□□□□ 0.22
PDE6BP35913 AL391903.1-201ENST00000407513 365 ntBASIC16.4■□□□□ 0.22
PDE6BP35913 AC012513.2-201ENST00000441511 1137 ntBASIC16.4■□□□□ 0.22
PDE6BP35913 POU5F1-202ENST00000441888 1055 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PDE6BP35913 AL589666.1-201ENST00000503906 835 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
PDE6BP35913 AC106789.1-201ENST00000512927 570 ntTSL 4 BASIC16.4■□□□□ 0.22
PDE6BP35913 MYL6-210ENST00000548400 573 ntTSL 3 BASIC16.4■□□□□ 0.22
PDE6BP35913 IFI27L1-209ENST00000555523 680 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
PDE6BP35913 MT1L-201ENST00000565768 411 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PDE6BP35913 AC048380.1-201ENST00000589818 465 ntTSL 3 BASIC16.4■□□□□ 0.22
PDE6BP35913 AC008687.7-203ENST00000598442 551 ntTSL 4 BASIC16.4■□□□□ 0.22
PDE6BP35913 AC104521.1-201ENST00000598582 279 ntTSL 5 BASIC16.4■□□□□ 0.22
PDE6BP35913 AL109983.1-201ENST00000603234 646 ntBASIC16.4■□□□□ 0.22
PDE6BP35913 Metazoa_SRP.152-201ENST00000614413 286 ntBASIC16.4■□□□□ 0.22
PDE6BP35913 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PDE6BP35913 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC16.4■□□□□ 0.22
PDE6BP35913 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PDE6BP35913 ZP4-201ENST00000366570 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PDE6BP35913 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
PDE6BP35913 HNRNPL-210ENST00000600873 1633 ntTSL 5 BASIC16.4■□□□□ 0.22
PDE6BP35913 CACNA2D4-209ENST00000538450 1498 ntTSL 2 BASIC16.4■□□□□ 0.22
PDE6BP35913 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PDE6BP35913 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC16.4■□□□□ 0.22
PDE6BP35913 Z98259.1-201ENST00000564261 1697 ntBASIC16.4■□□□□ 0.22
PDE6BP35913 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC16.4■□□□□ 0.22
PDE6BP35913 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
PDE6BP35913 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PDE6BP35913 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PDE6BP35913 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
PDE6BP35913 PRAMEF25-201ENST00000614839 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
PDE6BP35913 PRAMEF26-201ENST00000624207 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
PDE6BP35913 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.22
PDE6BP35913 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
PDE6BP35913 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PDE6BP35913 A1BG-AS1-203ENST00000594950 1718 ntTSL 2 BASIC16.39■□□□□ 0.21
PDE6BP35913 PI4KAP2-201ENST00000360806 2080 ntBASIC16.39■□□□□ 0.21
PDE6BP35913 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PDE6BP35913 DNPEP-205ENST00000373972 1578 ntTSL 2 BASIC16.39■□□□□ 0.21
PDE6BP35913 SYBU-217ENST00000528331 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
PDE6BP35913 AL591368.1-201ENST00000437181 1449 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PDE6BP35913 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PDE6BP35913 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PDE6BP35913 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PDE6BP35913 TNFSF13-203ENST00000380535 2195 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PDE6BP35913 KRTAP4-6-201ENST00000345847 1055 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
PDE6BP35913 COQ4-202ENST00000372875 928 ntTSL 2 BASIC16.39■□□□□ 0.21
PDE6BP35913 THYN1-203ENST00000392594 943 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PDE6BP35913 RPS7-202ENST00000403564 764 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
PDE6BP35913 ZNF662-202ENST00000422021 436 ntTSL 2 BASIC16.39■□□□□ 0.21
PDE6BP35913 DIS3L2P1-201ENST00000509197 559 ntBASIC16.39■□□□□ 0.21
PDE6BP35913 AC092435.2-201ENST00000515530 524 ntTSL 4 BASIC16.39■□□□□ 0.21
PDE6BP35913 ALG10-202ENST00000538927 571 ntTSL 5 BASIC16.39■□□□□ 0.21
PDE6BP35913 SLC25A3-212ENST00000549338 1285 ntAPPRIS ALT1 TSL 3 BASIC16.39■□□□□ 0.21
PDE6BP35913 C17orf62-234ENST00000584503 584 ntTSL 2 BASIC16.39■□□□□ 0.21
PDE6BP35913 HCG18-241ENST00000602290 821 ntTSL 2 BASIC16.39■□□□□ 0.21
PDE6BP35913 AC021321.1-201ENST00000607397 1113 ntBASIC16.39■□□□□ 0.21
PDE6BP35913 MIF4GD-214ENST00000618645 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PDE6BP35913 SERPING1-213ENST00000619430 634 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PDE6BP35913 TP73-207ENST00000378290 1831 ntTSL 2 BASIC16.39■□□□□ 0.21
PDE6BP35913 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PDE6BP35913 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PDE6BP35913 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
PDE6BP35913 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PDE6BP35913 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
PDE6BP35913 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PDE6BP35913 TRIM39-RPP21-201ENST00000623385 1698 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
PDE6BP35913 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PDE6BP35913 ARSH-201ENST00000381130 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PDE6BP35913 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
PDE6BP35913 AHCYP7-201ENST00000560847 1308 ntBASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms