Protein–RNA interactions for Protein: O00533

CHL1, Neural cell adhesion molecule L1-like protein, humanhuman

Predictions only

Length 1,208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1O00533 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
CHL1O00533 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC17.09■□□□□ 0.33
CHL1O00533 AL445209.1-201ENST00000607269 3491 ntBASIC17.09■□□□□ 0.33
CHL1O00533 MT1F-201ENST00000334350 690 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CHL1O00533 AC068631.1-228ENST00000354642 742 ntTSL 5 BASIC17.09■□□□□ 0.33
CHL1O00533 SNORA30.1-201ENST00000363193 129 ntBASIC17.09■□□□□ 0.33
CHL1O00533 REG3G-202ENST00000393897 856 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CHL1O00533 AC027612.2-201ENST00000436174 1145 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CHL1O00533 CLNK-203ENST00000507719 1143 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CHL1O00533 AC233724.9-201ENST00000511694 407 ntBASIC17.09■□□□□ 0.33
CHL1O00533 MIR497HG-202ENST00000572453 3838 ntBASIC17.09■□□□□ 0.33
CHL1O00533 AL591424.3-201ENST00000614278 872 ntBASIC17.09■□□□□ 0.33
CHL1O00533 AC245595.2-201ENST00000620141 1144 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CHL1O00533 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
CHL1O00533 CR382285.1-201ENST00000625012 1485 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CHL1O00533 IL2RG-203ENST00000374202 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CHL1O00533 GMPR2-224ENST00000559910 1562 ntTSL 5 BASIC17.09■□□□□ 0.33
CHL1O00533 SERPINB8-209ENST00000636430 1719 ntTSL 5 BASIC17.09■□□□□ 0.33
CHL1O00533 MCOLN3-201ENST00000341115 1762 ntTSL 2 BASIC17.09■□□□□ 0.33
CHL1O00533 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
CHL1O00533 AL356130.1-201ENST00000620188 1965 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CHL1O00533 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
CHL1O00533 SLC22A20-202ENST00000525437 3196 ntTSL 5 BASIC17.09■□□□□ 0.33
CHL1O00533 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CHL1O00533 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
CHL1O00533 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CHL1O00533 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CHL1O00533 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC17.08■□□□□ 0.33
CHL1O00533 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
CHL1O00533 GK-203ENST00000378943 3707 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CHL1O00533 ZNF202-207ENST00000530393 3564 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CHL1O00533 FOSB-212ENST00000592811 3089 ntTSL 2 BASIC17.08■□□□□ 0.33
CHL1O00533 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC17.08■□□□□ 0.33
CHL1O00533 LIPC-202ENST00000356113 2161 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
CHL1O00533 TRIM21-201ENST00000254436 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CHL1O00533 HACD3-210ENST00000568793 1824 ntTSL 5 BASIC17.08■□□□□ 0.33
CHL1O00533 AFG3L2P1-201ENST00000521792 1763 ntBASIC17.08■□□□□ 0.33
CHL1O00533 SRSF5-201ENST00000394366 1638 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CHL1O00533 PSMC5-201ENST00000310144 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CHL1O00533 PPARA-202ENST00000402126 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CHL1O00533 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CHL1O00533 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CHL1O00533 BCCIP-203ENST00000368759 1433 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CHL1O00533 GPR45-201ENST00000258456 1307 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
CHL1O00533 NRG1-211ENST00000520502 1330 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CHL1O00533 PSTPIP1-207ENST00000559295 1349 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CHL1O00533 KRTAP4-6-201ENST00000345847 1055 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
CHL1O00533 KRT19P4-201ENST00000443208 943 ntBASIC17.08■□□□□ 0.32
CHL1O00533 GSS-202ENST00000451957 1092 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CHL1O00533 RPL7AP53-201ENST00000468834 793 ntBASIC17.08■□□□□ 0.32
CHL1O00533 RN7SL789P-201ENST00000478944 293 ntBASIC17.08■□□□□ 0.32
CHL1O00533 RPSAP70-201ENST00000504462 864 ntBASIC17.08■□□□□ 0.32
CHL1O00533 HNRNPA1P4-201ENST00000509706 756 ntBASIC17.08■□□□□ 0.32
CHL1O00533 MIR2278-201ENST00000516344 96 ntBASIC17.08■□□□□ 0.32
CHL1O00533 AC012158.2-201ENST00000536546 354 ntBASIC17.08■□□□□ 0.32
CHL1O00533 AC004801.1-201ENST00000549557 360 ntBASIC17.08■□□□□ 0.32
CHL1O00533 SLC9A3R2-204ENST00000563587 1037 ntTSL 2 BASIC17.08■□□□□ 0.32
CHL1O00533 AC073254.1-209ENST00000604677 631 ntTSL 5 BASIC17.08■□□□□ 0.32
CHL1O00533 TMEM230-211ENST00000615008 594 ntTSL 4 BASIC17.08■□□□□ 0.32
CHL1O00533 AL590094.1-206ENST00000635959 478 ntTSL 5 BASIC17.08■□□□□ 0.32
CHL1O00533 AL590094.1-209ENST00000637260 499 ntTSL 5 BASIC17.08■□□□□ 0.32
CHL1O00533 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CHL1O00533 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
CHL1O00533 AC092171.2-201ENST00000444210 3251 ntTSL 5 BASIC17.08■□□□□ 0.32
CHL1O00533 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CHL1O00533 CTCFL-208ENST00000432255 2955 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CHL1O00533 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
CHL1O00533 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
CHL1O00533 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CHL1O00533 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
CHL1O00533 AC021218.1-201ENST00000377722 2536 ntTSL 2 BASIC17.08■□□□□ 0.32
CHL1O00533 SAP30BP-202ENST00000355423 2439 ntTSL 2 BASIC17.08■□□□□ 0.32
CHL1O00533 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
CHL1O00533 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CHL1O00533 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC17.08■□□□□ 0.32
CHL1O00533 POLDIP3-209ENST00000617178 2006 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CHL1O00533 ZNF384-201ENST00000319770 3266 ntTSL 2 BASIC17.08■□□□□ 0.32
CHL1O00533 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CHL1O00533 RHOH-222ENST00000617441 1872 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
CHL1O00533 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC17.07■□□□□ 0.32
CHL1O00533 ST20-AS1-201ENST00000560255 4223 ntBASIC17.07■□□□□ 0.32
CHL1O00533 TCAF2-205ENST00000444908 2976 ntTSL 5 BASIC17.07■□□□□ 0.32
CHL1O00533 STRA6-203ENST00000416286 2750 ntTSL 5 BASIC17.07■□□□□ 0.32
CHL1O00533 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CHL1O00533 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC17.07■□□□□ 0.32
CHL1O00533 AL591368.1-201ENST00000437181 1449 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CHL1O00533 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CHL1O00533 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
CHL1O00533 AC026271.1-201ENST00000447794 1348 ntBASIC17.07■□□□□ 0.32
CHL1O00533 OPN1SW-201ENST00000249389 1096 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CHL1O00533 TEPP-201ENST00000290871 1079 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
CHL1O00533 AC024475.2-201ENST00000312173 879 ntBASIC17.07■□□□□ 0.32
CHL1O00533 GAST-201ENST00000329402 470 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CHL1O00533 VASH2-205ENST00000366967 1206 ntTSL 2 BASIC17.07■□□□□ 0.32
CHL1O00533 AL359649.1-202ENST00000375713 443 ntTSL 5 BASIC17.07■□□□□ 0.32
CHL1O00533 KLK11-203ENST00000391804 930 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
CHL1O00533 MARCKSL1P2-201ENST00000401037 976 ntBASIC17.07■□□□□ 0.32
CHL1O00533 COLEC11-204ENST00000402794 1134 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CHL1O00533 RBMXP1-201ENST00000408004 1191 ntBASIC17.07■□□□□ 0.32
CHL1O00533 TEDDM2P-201ENST00000414169 786 ntBASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 90.4 ms