Protein–RNA interactions for Protein: P51654

GPC3, Glypican-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3P51654 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
GPC3P51654 NIT1-202ENST00000368008 2081 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
GPC3P51654 ATP1B3-201ENST00000286371 1811 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
GPC3P51654 GIPC3-201ENST00000322315 4335 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
GPC3P51654 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
GPC3P51654 FAM86C1-202ENST00000359244 2110 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
GPC3P51654 SCAMP1-AS1-201ENST00000421004 1479 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
GPC3P51654 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
GPC3P51654 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
GPC3P51654 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
GPC3P51654 CYFIP2-219ENST00000616178 4210 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
GPC3P51654 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
GPC3P51654 SDR9C7-201ENST00000293502 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
GPC3P51654 GFI1B-202ENST00000372122 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
GPC3P51654 GOLGA8N-205ENST00000569659 1791 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
GPC3P51654 AC008040.5-201ENST00000599781 1781 ntBASIC14.88□□□□□ -0.03
GPC3P51654 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
GPC3P51654 DCAF8-201ENST00000326837 3972 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
GPC3P51654 TRAF3IP3-204ENST00000367026 2058 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
GPC3P51654 THPO-203ENST00000445696 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
GPC3P51654 OSBPL2-201ENST00000313733 4009 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
GPC3P51654 ATG9B-203ENST00000469530 3489 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
GPC3P51654 AC007666.1-201ENST00000443935 1838 ntTSL 5 BASIC14.88□□□□□ -0.03
GPC3P51654 ADRA1A-210ENST00000519229 1838 ntTSL 5 BASIC14.88□□□□□ -0.03
GPC3P51654 SYCN-201ENST00000318438 573 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
GPC3P51654 C6orf48-202ENST00000375635 610 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
GPC3P51654 C6orf48-209ENST00000395789 952 ntAPPRIS P1 TSL 3 BASIC14.88□□□□□ -0.03
GPC3P51654 MRPS12-202ENST00000402029 929 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
GPC3P51654 PGAM1P11-201ENST00000416729 680 ntBASIC14.88□□□□□ -0.03
GPC3P51654 LAMTOR4-202ENST00000441173 730 ntTSL 2 BASIC14.88□□□□□ -0.03
GPC3P51654 RHOH-206ENST00000505618 1225 ntAPPRIS P1 TSL 4 BASIC14.88□□□□□ -0.03
GPC3P51654 NDUFB2P1-201ENST00000506966 295 ntBASIC14.88□□□□□ -0.03
GPC3P51654 AC009065.6-201ENST00000568795 456 ntTSL 2 BASIC14.88□□□□□ -0.03
GPC3P51654 KRT16P3-202ENST00000580113 1012 ntTSL 3 BASIC14.88□□□□□ -0.03
GPC3P51654 KRT16P1-203ENST00000581027 1012 ntTSL 5 BASIC14.88□□□□□ -0.03
GPC3P51654 SELENOW-212ENST00000601048 888 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
GPC3P51654 AL139339.2-201ENST00000608063 657 ntBASIC14.88□□□□□ -0.03
GPC3P51654 Z82244.1-201ENST00000631502 840 ntBASIC14.88□□□□□ -0.03
GPC3P51654 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
GPC3P51654 RSPH4A-202ENST00000368580 1410 ntTSL 5 BASIC14.88□□□□□ -0.03
GPC3P51654 TMEM25-201ENST00000313236 2409 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
GPC3P51654 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
GPC3P51654 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
GPC3P51654 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
GPC3P51654 TFEB-205ENST00000394283 2595 ntTSL 2 BASIC14.88□□□□□ -0.03
GPC3P51654 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
GPC3P51654 ELAVL1-201ENST00000407627 6015 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
GPC3P51654 AAAS-202ENST00000394384 1703 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
GPC3P51654 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC14.88□□□□□ -0.03
GPC3P51654 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
GPC3P51654 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC14.88□□□□□ -0.03
GPC3P51654 PPP1R26P4-201ENST00000619065 3527 ntBASIC14.88□□□□□ -0.03
GPC3P51654 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
GPC3P51654 HTR3D-201ENST00000334128 1459 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
GPC3P51654 RHPN1-AS1-201ENST00000518049 1918 ntBASIC14.88□□□□□ -0.03
GPC3P51654 NCF2-201ENST00000367535 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
GPC3P51654 CCER1-201ENST00000358859 2962 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
GPC3P51654 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
GPC3P51654 AMOTL2-212ENST00000514516 4521 ntTSL 2 BASIC14.87□□□□□ -0.03
GPC3P51654 TRMT1L-201ENST00000367506 4392 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
GPC3P51654 PNKD-203ENST00000273077 3021 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
GPC3P51654 SYNPR-209ENST00000478300 2709 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
GPC3P51654 DISC1-221ENST00000620189 6689 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
GPC3P51654 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC14.87□□□□□ -0.03
GPC3P51654 ZNF570-202ENST00000586475 1985 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
GPC3P51654 AC111188.1-201ENST00000525758 1833 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
GPC3P51654 DDX19B-202ENST00000355992 1692 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
GPC3P51654 CYP26B1-201ENST00000001146 4732 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
GPC3P51654 TBC1D3P2-201ENST00000339120 1513 ntTSL 2 BASIC14.87□□□□□ -0.03
GPC3P51654 MCF2L-209ENST00000397036 1544 ntTSL 2 BASIC14.87□□□□□ -0.03
GPC3P51654 LINC00675-202ENST00000581851 1530 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
GPC3P51654 PDHB-210ENST00000485460 1397 ntTSL 2 BASIC14.87□□□□□ -0.03
GPC3P51654 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
GPC3P51654 CSNK1E-201ENST00000359867 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
GPC3P51654 RIPOR1-204ENST00000428437 4152 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
GPC3P51654 DNAJB8-201ENST00000319153 2465 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
GPC3P51654 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
GPC3P51654 LINC01744-201ENST00000457698 2042 ntTSL 2 BASIC14.87□□□□□ -0.03
GPC3P51654 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC14.87□□□□□ -0.03
GPC3P51654 KIR2DL3-201ENST00000342376 1590 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
GPC3P51654 CALB1-201ENST00000265431 2533 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
GPC3P51654 HIGD2A-201ENST00000274787 668 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
GPC3P51654 AL513165.1-201ENST00000413915 289 ntTSL 3 BASIC14.87□□□□□ -0.03
GPC3P51654 AC092570.1-201ENST00000414446 469 ntBASIC14.87□□□□□ -0.03
GPC3P51654 HNRNPA1P21-201ENST00000424115 961 ntBASIC14.87□□□□□ -0.03
GPC3P51654 AC015818.1-201ENST00000451011 244 ntBASIC14.87□□□□□ -0.03
GPC3P51654 AC025171.3-201ENST00000509036 472 ntTSL 2 BASIC14.87□□□□□ -0.03
GPC3P51654 SRPK2P-201ENST00000523408 1100 ntBASIC14.87□□□□□ -0.03
GPC3P51654 LINC01836-201ENST00000586061 829 ntTSL 3 BASIC14.87□□□□□ -0.03
GPC3P51654 Metazoa_SRP.127-201ENST00000614914 302 ntBASIC14.87□□□□□ -0.03
GPC3P51654 PI4KAP2-201ENST00000360806 2080 ntBASIC14.87□□□□□ -0.03
GPC3P51654 ZSCAN5B-202ENST00000586855 2059 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
GPC3P51654 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
GPC3P51654 PEG10-205ENST00000612748 2585 ntAPPRIS P5 TSL 5 BASIC14.87□□□□□ -0.03
GPC3P51654 AC019294.4-201ENST00000561777 2905 ntBASIC14.87□□□□□ -0.03
GPC3P51654 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
GPC3P51654 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
GPC3P51654 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
GPC3P51654 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
GPC3P51654 KRT17P5-203ENST00000445433 2333 ntTSL 2 BASIC14.87□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 66.2 ms