Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 FRMD6-203ENST00000395718 4828 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SLC1A1P43005 PPARG-206ENST00000397012 2006 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SLC1A1P43005 SLC22A23-202ENST00000380302 2883 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SLC1A1P43005 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SLC1A1P43005 PSMB10-201ENST00000358514 1218 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SLC1A1P43005 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SLC1A1P43005 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SLC1A1P43005 ACTBP14-201ENST00000411655 1089 ntBASIC14.16□□□□□ -0.14
SLC1A1P43005 AL359853.1-202ENST00000415218 544 ntTSL 2 BASIC14.16□□□□□ -0.14
SLC1A1P43005 POLR2H-203ENST00000430783 1159 ntTSL 2 BASIC14.16□□□□□ -0.14
SLC1A1P43005 AC005077.2-201ENST00000449786 690 ntBASIC14.16□□□□□ -0.14
SLC1A1P43005 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC14.16□□□□□ -0.14
SLC1A1P43005 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC14.16□□□□□ -0.14
SLC1A1P43005 AC108474.1-201ENST00000507776 421 ntTSL 3 BASIC14.16□□□□□ -0.14
SLC1A1P43005 ADM-202ENST00000524948 584 ntTSL 2 BASIC14.16□□□□□ -0.14
SLC1A1P43005 POLD4-206ENST00000530584 899 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SLC1A1P43005 POLD4-208ENST00000532830 904 ntTSL 3 BASIC14.16□□□□□ -0.14
SLC1A1P43005 IQSEC3P1-201ENST00000538799 536 ntBASIC14.16□□□□□ -0.14
SLC1A1P43005 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC14.16□□□□□ -0.14
SLC1A1P43005 C2orf27AP1-201ENST00000618128 586 ntBASIC14.16□□□□□ -0.14
SLC1A1P43005 RPS10-207ENST00000621356 784 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
SLC1A1P43005 AC006453.1-201ENST00000636037 1257 ntBASIC14.16□□□□□ -0.14
SLC1A1P43005 OCA2-201ENST00000353809 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
SLC1A1P43005 SUN2-201ENST00000405018 4022 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SLC1A1P43005 HERPUD1-202ENST00000344114 1388 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SLC1A1P43005 MIR34AHG-203ENST00000635687 4211 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SLC1A1P43005 OLFML2A-203ENST00000373580 6425 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
SLC1A1P43005 SERBP1-204ENST00000370995 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
SLC1A1P43005 COPS7B-201ENST00000350033 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SLC1A1P43005 COL6A3-202ENST00000347401 8625 ntTSL 5 BASIC14.16□□□□□ -0.14
SLC1A1P43005 COL6A3-209ENST00000472056 8628 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SLC1A1P43005 BRD1-201ENST00000216267 4614 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SLC1A1P43005 YIPF6-204ENST00000462683 6741 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SLC1A1P43005 BAIAP3-207ENST00000562208 3663 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
SLC1A1P43005 TBC1D3P1-201ENST00000590047 1693 ntBASIC14.16□□□□□ -0.14
SLC1A1P43005 C1QTNF1-204ENST00000392445 2833 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
SLC1A1P43005 PLPP6-201ENST00000381883 2944 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
SLC1A1P43005 CPA5-203ENST00000461828 1794 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SLC1A1P43005 MTF2-202ENST00000370303 1951 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SLC1A1P43005 COL18A1-AS1-201ENST00000397787 3425 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SLC1A1P43005 POLD1-205ENST00000595904 3402 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SLC1A1P43005 EXOC3-201ENST00000315013 2682 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
SLC1A1P43005 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SLC1A1P43005 HNRNPUL1-207ENST00000595018 2794 ntTSL 2 BASIC14.16□□□□□ -0.14
SLC1A1P43005 DNAJB12-202ENST00000394903 3198 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SLC1A1P43005 PREX1-201ENST00000371941 6636 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SLC1A1P43005 MEGF8-201ENST00000251268 9549 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
SLC1A1P43005 PPP1R12B-214ENST00000491336 2046 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SLC1A1P43005 SFMBT2-203ENST00000379713 2402 ntTSL 2 BASIC14.15□□□□□ -0.14
SLC1A1P43005 PDXK-210ENST00000468090 7297 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SLC1A1P43005 SAMD14-202ENST00000330175 4425 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SLC1A1P43005 RFFL-201ENST00000315249 7293 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
SLC1A1P43005 FIBCD1-202ENST00000372338 3253 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SLC1A1P43005 LDLRAD4-203ENST00000399848 8633 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SLC1A1P43005 FLAD1-207ENST00000368433 2656 ntTSL 2 BASIC14.15□□□□□ -0.14
SLC1A1P43005 MEST-204ENST00000393187 2380 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
SLC1A1P43005 GOLGA8N-205ENST00000569659 1791 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
SLC1A1P43005 AP002986.1-201ENST00000602376 1763 ntTSL 5 BASIC14.15□□□□□ -0.14
SLC1A1P43005 GPR61-204ENST00000527748 4921 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
SLC1A1P43005 NDRG1-222ENST00000522476 1385 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SLC1A1P43005 EPPIN-201ENST00000336443 1217 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SLC1A1P43005 Metazoa_SRP.4-201ENST00000366232 298 ntBASIC14.15□□□□□ -0.14
SLC1A1P43005 PSMA1-202ENST00000418988 1266 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SLC1A1P43005 CALR4P-201ENST00000431943 946 ntBASIC14.15□□□□□ -0.14
SLC1A1P43005 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC14.15□□□□□ -0.14
SLC1A1P43005 AL390961.2-201ENST00000454991 472 ntTSL 3 BASIC14.15□□□□□ -0.14
SLC1A1P43005 AC025186.1-201ENST00000478174 870 ntBASIC14.15□□□□□ -0.14
SLC1A1P43005 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC14.15□□□□□ -0.14
SLC1A1P43005 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC14.15□□□□□ -0.14
SLC1A1P43005 AL132994.1-201ENST00000554098 400 ntBASIC14.15□□□□□ -0.14
SLC1A1P43005 AL845331.2-201ENST00000561882 1044 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
SLC1A1P43005 AC023421.2-201ENST00000589510 313 ntTSL 5 BASIC14.15□□□□□ -0.14
SLC1A1P43005 AC012044.1-201ENST00000603431 297 ntBASIC14.15□□□□□ -0.14
SLC1A1P43005 AC242426.4-201ENST00000606856 573 ntTSL 5 BASIC14.15□□□□□ -0.14
SLC1A1P43005 CDK7-214ENST00000626796 358 ntTSL 5 BASIC14.15□□□□□ -0.14
SLC1A1P43005 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC14.15□□□□□ -0.14
SLC1A1P43005 BDH1-203ENST00000392379 3546 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
SLC1A1P43005 PIK3R6-204ENST00000619866 3041 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
SLC1A1P43005 SCARA5-202ENST00000380385 2934 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SLC1A1P43005 ZNF197-204ENST00000383745 2935 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SLC1A1P43005 ABCC4-206ENST00000536256 2840 ntTSL 2 BASIC14.15□□□□□ -0.14
SLC1A1P43005 ACOX2-201ENST00000302819 2426 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SLC1A1P43005 PABPC1-208ENST00000519004 2401 ntTSL 2 BASIC14.15□□□□□ -0.14
SLC1A1P43005 CTBP1-AS-201ENST00000625256 3886 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SLC1A1P43005 AC093668.2-201ENST00000481893 3569 ntTSL 2 BASIC14.15□□□□□ -0.14
SLC1A1P43005 AC105052.1-201ENST00000519541 3569 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
SLC1A1P43005 GLB1L-203ENST00000409640 2042 ntTSL 2 BASIC14.15□□□□□ -0.14
SLC1A1P43005 CNTNAP2-207ENST00000628930 1944 ntTSL 2 BASIC14.15□□□□□ -0.14
SLC1A1P43005 HK3-201ENST00000292432 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SLC1A1P43005 EIF3CL-201ENST00000380876 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SLC1A1P43005 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SLC1A1P43005 FPR2-203ENST00000598953 1544 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
SLC1A1P43005 GDPD5-204ENST00000526177 4150 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SLC1A1P43005 NR3C1-204ENST00000394466 3245 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
SLC1A1P43005 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
SLC1A1P43005 CCDC13-201ENST00000310232 2943 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SLC1A1P43005 KCNIP2-203ENST00000348850 2089 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SLC1A1P43005 DNAJC13-201ENST00000260818 7730 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SLC1A1P43005 ESRRB-204ENST00000509242 2849 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SLC1A1P43005 C1QTNF1-203ENST00000354124 2714 ntAPPRIS P1 TSL 4 BASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms