Protein–RNA interactions for Protein: P16410

CTLA4, Cytotoxic T-lymphocyte protein 4, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTLA4P16410 SERPINB9P1-202ENST00000545177 1375 ntTSL 3 BASIC12.02□□□□□ -0.49
CTLA4P16410 ARHGEF9-220ENST00000635729 1761 ntTSL 5 BASIC12.02□□□□□ -0.49
CTLA4P16410 MEG8-221ENST00000636391 2155 ntTSL 5 BASIC12.02□□□□□ -0.49
CTLA4P16410 CSNK1G1-209ENST00000634811 2592 ntAPPRIS ALT1 TSL 5 BASIC12.02□□□□□ -0.49
CTLA4P16410 PRRT2-201ENST00000300797 3002 ntTSL 2 BASIC12.02□□□□□ -0.49
CTLA4P16410 RAB37-204ENST00000392613 2617 ntAPPRIS ALT1 TSL 2 BASIC12.02□□□□□ -0.49
CTLA4P16410 ZCRB1-201ENST00000266529 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
CTLA4P16410 AC098934.1-201ENST00000443294 1835 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
CTLA4P16410 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
CTLA4P16410 BEST1-208ENST00000534553 1829 ntTSL 2 BASIC12.02□□□□□ -0.49
CTLA4P16410 SEPT6-201ENST00000343984 2693 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
CTLA4P16410 GNB5-203ENST00000396335 2678 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
CTLA4P16410 ESRRB-201ENST00000380887 2745 ntTSL 5 BASIC12.02□□□□□ -0.49
CTLA4P16410 TNFRSF21-201ENST00000296861 3595 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
CTLA4P16410 MLX-202ENST00000346833 2334 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.49
CTLA4P16410 AFDN-206ENST00000392112 7459 ntTSL 5 BASIC12.01□□□□□ -0.49
CTLA4P16410 IKZF1-204ENST00000349824 5757 ntTSL 5 BASIC12.01□□□□□ -0.49
CTLA4P16410 MTA3-202ENST00000405592 5832 ntTSL 2 BASIC12.01□□□□□ -0.49
CTLA4P16410 SLC35E2B-205ENST00000617444 6283 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CTLA4P16410 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CTLA4P16410 AC091807.1-201ENST00000418838 1544 ntBASIC12.01□□□□□ -0.49
CTLA4P16410 YTHDF3-209ENST00000617200 5076 ntTSL 5 BASIC12.01□□□□□ -0.49
CTLA4P16410 CHRNA2-207ENST00000520933 2497 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
CTLA4P16410 CTBP1-AS-201ENST00000625256 3886 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
CTLA4P16410 ETAA1-201ENST00000272342 3418 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CTLA4P16410 AC138150.2-201ENST00000589796 2053 ntTSL 2 BASIC12.01□□□□□ -0.49
CTLA4P16410 DTX1-201ENST00000257600 3455 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CTLA4P16410 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
CTLA4P16410 HK3-201ENST00000292432 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CTLA4P16410 PEAR1-202ENST00000338302 4970 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
CTLA4P16410 TBC1D3P1-201ENST00000590047 1693 ntBASIC12.01□□□□□ -0.49
CTLA4P16410 SERPING1-202ENST00000340687 1719 ntTSL 5 BASIC12.01□□□□□ -0.49
CTLA4P16410 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
CTLA4P16410 RNVU1-8-201ENST00000364272 125 ntBASIC12.01□□□□□ -0.49
CTLA4P16410 G0S2-201ENST00000367029 866 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CTLA4P16410 SSR4-202ENST00000370085 526 ntTSL 2 BASIC12.01□□□□□ -0.49
CTLA4P16410 AL512430.1-201ENST00000392575 860 ntBASIC12.01□□□□□ -0.49
CTLA4P16410 IL18BP-206ENST00000393707 1037 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
CTLA4P16410 SNORD23-201ENST00000408876 110 ntBASIC12.01□□□□□ -0.49
CTLA4P16410 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC12.01□□□□□ -0.49
CTLA4P16410 AC041040.1-201ENST00000425197 460 ntBASIC12.01□□□□□ -0.49
CTLA4P16410 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC12.01□□□□□ -0.49
CTLA4P16410 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC12.01□□□□□ -0.49
CTLA4P16410 DLEU2-205ENST00000443587 705 ntTSL 5 BASIC12.01□□□□□ -0.49
CTLA4P16410 AC234782.1-201ENST00000451950 919 ntBASIC12.01□□□□□ -0.49
CTLA4P16410 RN7SL720P-201ENST00000488178 304 ntBASIC12.01□□□□□ -0.49
CTLA4P16410 RN7SL375P-201ENST00000492442 298 ntBASIC12.01□□□□□ -0.49
CTLA4P16410 AC105254.1-201ENST00000507782 621 ntTSL 4 BASIC12.01□□□□□ -0.49
CTLA4P16410 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC12.01□□□□□ -0.49
CTLA4P16410 CHMP4BP1-201ENST00000556017 588 ntBASIC12.01□□□□□ -0.49
CTLA4P16410 AC090825.1-202ENST00000560059 665 ntTSL 3 BASIC12.01□□□□□ -0.49
CTLA4P16410 KLKP1-202ENST00000597246 1125 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
CTLA4P16410 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC12.01□□□□□ -0.49
CTLA4P16410 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC12.01□□□□□ -0.49
CTLA4P16410 PEX1-204ENST00000438045 3329 ntTSL 2 BASIC12.01□□□□□ -0.49
CTLA4P16410 CARHSP1-217ENST00000611932 2833 ntAPPRIS P1 TSL 3 BASIC12.01□□□□□ -0.49
CTLA4P16410 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CTLA4P16410 ANKRD36-204ENST00000461153 6102 ntAPPRIS P2 TSL 5 BASIC12.01□□□□□ -0.49
CTLA4P16410 PPP2R5E-201ENST00000337537 6659 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
CTLA4P16410 MIRLET7BHG-201ENST00000360737 4560 ntTSL 2 BASIC12.01□□□□□ -0.49
CTLA4P16410 AGAP4-203ENST00000448048 2439 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
CTLA4P16410 TRIM21-201ENST00000254436 1924 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CTLA4P16410 DDC-201ENST00000357936 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CTLA4P16410 RRBP1-206ENST00000455029 2485 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
CTLA4P16410 RGMA-203ENST00000542321 3038 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
CTLA4P16410 LDB3-202ENST00000361373 5297 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
CTLA4P16410 LINC00563-201ENST00000566370 1400 ntBASIC12.01□□□□□ -0.49
CTLA4P16410 ABI2-201ENST00000261016 6634 ntTSL 2 BASIC12.01□□□□□ -0.49
CTLA4P16410 ABI2-203ENST00000261018 6638 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
CTLA4P16410 MON1B-201ENST00000248248 6091 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CTLA4P16410 KIAA1958-202ENST00000374244 2643 ntAPPRIS ALT1 TSL 5 BASIC12.01□□□□□ -0.49
CTLA4P16410 RIC8B-201ENST00000355478 3207 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
CTLA4P16410 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CTLA4P16410 ANKDD1A-207ENST00000496660 1477 ntTSL 2 BASIC12.01□□□□□ -0.49
CTLA4P16410 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
CTLA4P16410 ZFYVE19-209ENST00000564258 2059 ntTSL 2 BASIC12.01□□□□□ -0.49
CTLA4P16410 FLAD1-207ENST00000368433 2656 ntTSL 2 BASIC12.01□□□□□ -0.49
CTLA4P16410 AC008764.8-201ENST00000623966 2717 ntBASIC12.01□□□□□ -0.49
CTLA4P16410 ARAP1-202ENST00000359373 5767 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
CTLA4P16410 LGALS4-201ENST00000307751 1535 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CTLA4P16410 GBAP1-208ENST00000566701 1546 ntBASIC12.01□□□□□ -0.49
CTLA4P16410 FAM187A-201ENST00000331733 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CTLA4P16410 CCDC103-204ENST00000417826 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
CTLA4P16410 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
CTLA4P16410 DHRS7B-202ENST00000395511 2175 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
CTLA4P16410 DGKZ-204ENST00000454345 4086 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
CTLA4P16410 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CTLA4P16410 ZNF564-201ENST00000339282 2935 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CTLA4P16410 AC006144.1-201ENST00000424220 1600 ntBASIC12□□□□□ -0.49
CTLA4P16410 FP325330.2-201ENST00000624219 5630 ntBASIC12□□□□□ -0.49
CTLA4P16410 TMEM164-203ENST00000372072 4975 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
CTLA4P16410 CEP83-208ENST00000547575 3122 ntTSL 2 BASIC12□□□□□ -0.49
CTLA4P16410 ALPK3-201ENST00000258888 10917 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CTLA4P16410 SRP72-205ENST00000510663 2473 ntTSL 1 (best) BASIC12□□□□□ -0.49
CTLA4P16410 BTRC-202ENST00000370187 6134 ntAPPRIS P4 TSL 1 (best) BASIC12□□□□□ -0.49
CTLA4P16410 RPUSD4-201ENST00000298317 2512 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CTLA4P16410 RAB37-203ENST00000392612 2528 ntTSL 2 BASIC12□□□□□ -0.49
CTLA4P16410 STXBP1-202ENST00000373302 3967 ntTSL 1 (best) BASIC12□□□□□ -0.49
CTLA4P16410 CAMKV-209ENST00000477224 3314 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
CTLA4P16410 RAB8B-201ENST00000321437 4943 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms