Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 NOP16-207ENST00000614830 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RIMBP3Q9UFD9 FAM25BP-201ENST00000623997 268 ntBASIC20.11■□□□□ 0.81
RIMBP3Q9UFD9 HINFP-204ENST00000527410 1466 ntTSL 2 BASIC20.11■□□□□ 0.81
RIMBP3Q9UFD9 ALG8-201ENST00000299626 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RIMBP3Q9UFD9 LINC00943-204ENST00000537374 1688 ntTSL 5 BASIC20.11■□□□□ 0.81
RIMBP3Q9UFD9 DDX19B-208ENST00000563392 1760 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
RIMBP3Q9UFD9 AP002986.1-201ENST00000602376 1763 ntTSL 5 BASIC20.11■□□□□ 0.81
RIMBP3Q9UFD9 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
RIMBP3Q9UFD9 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
RIMBP3Q9UFD9 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
RIMBP3Q9UFD9 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC20.11■□□□□ 0.81
RIMBP3Q9UFD9 PES1P1-201ENST00000508165 1736 ntBASIC20.11■□□□□ 0.81
RIMBP3Q9UFD9 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
RIMBP3Q9UFD9 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC20.11■□□□□ 0.81
RIMBP3Q9UFD9 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC20.1■□□□□ 0.81
RIMBP3Q9UFD9 BEND3P2-201ENST00000414425 2254 ntBASIC20.1■□□□□ 0.81
RIMBP3Q9UFD9 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RIMBP3Q9UFD9 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RIMBP3Q9UFD9 PECR-201ENST00000265322 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RIMBP3Q9UFD9 BCO2-202ENST00000361053 1868 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
RIMBP3Q9UFD9 OLAH-203ENST00000378228 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RIMBP3Q9UFD9 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC20.1■□□□□ 0.81
RIMBP3Q9UFD9 C12orf57-201ENST00000229281 560 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RIMBP3Q9UFD9 RPL21-202ENST00000311549 815 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RIMBP3Q9UFD9 LMO7DN-201ENST00000318245 1167 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
RIMBP3Q9UFD9 DDIT3-201ENST00000346473 906 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RIMBP3Q9UFD9 RPS19P3-201ENST00000480487 441 ntBASIC20.1■□□□□ 0.81
RIMBP3Q9UFD9 ACA64.6-201ENST00000516310 117 ntBASIC20.1■□□□□ 0.81
RIMBP3Q9UFD9 snoZ6.1-201ENST00000516391 75 ntBASIC20.1■□□□□ 0.81
RIMBP3Q9UFD9 AC025252.1-201ENST00000535247 556 ntTSL 4 BASIC20.1■□□□□ 0.81
RIMBP3Q9UFD9 C12orf57-202ENST00000537087 662 ntTSL 2 BASIC20.1■□□□□ 0.81
RIMBP3Q9UFD9 AC074032.1-201ENST00000548468 698 ntTSL 3 BASIC20.1■□□□□ 0.81
RIMBP3Q9UFD9 AC068987.2-201ENST00000565518 896 ntBASIC20.1■□□□□ 0.81
RIMBP3Q9UFD9 AC011495.2-201ENST00000600665 360 ntTSL 5 BASIC20.1■□□□□ 0.81
RIMBP3Q9UFD9 AP000322.2-201ENST00000608289 510 ntBASIC20.1■□□□□ 0.81
RIMBP3Q9UFD9 CR392039.2-201ENST00000623182 509 ntBASIC20.1■□□□□ 0.81
RIMBP3Q9UFD9 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
RIMBP3Q9UFD9 AC007614.4-201ENST00000564048 1827 ntBASIC20.1■□□□□ 0.81
RIMBP3Q9UFD9 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
RIMBP3Q9UFD9 CACNA1C-AS1-201ENST00000501371 2191 ntTSL 2 BASIC20.1■□□□□ 0.81
RIMBP3Q9UFD9 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RIMBP3Q9UFD9 C2-209ENST00000452323 1999 ntTSL 2 BASIC20.1■□□□□ 0.81
RIMBP3Q9UFD9 AL627309.3-201ENST00000495576 1319 ntTSL 5 BASIC20.1■□□□□ 0.81
RIMBP3Q9UFD9 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
RIMBP3Q9UFD9 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RIMBP3Q9UFD9 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC20.1■□□□□ 0.81
RIMBP3Q9UFD9 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RIMBP3Q9UFD9 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RIMBP3Q9UFD9 TFG-202ENST00000418917 1716 ntAPPRIS ALT1 TSL 3 BASIC20.09■□□□□ 0.81
RIMBP3Q9UFD9 CETP-203ENST00000566128 1733 ntTSL 5 BASIC20.09■□□□□ 0.81
RIMBP3Q9UFD9 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RIMBP3Q9UFD9 AC244453.1-201ENST00000427872 494 ntTSL 3 BASIC20.09■□□□□ 0.81
RIMBP3Q9UFD9 RPAIN-214ENST00000574003 561 ntTSL 4 BASIC20.09■□□□□ 0.81
RIMBP3Q9UFD9 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
RIMBP3Q9UFD9 CCDC181-202ENST00000367806 1860 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RIMBP3Q9UFD9 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC20.09■□□□□ 0.81
RIMBP3Q9UFD9 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
RIMBP3Q9UFD9 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
RIMBP3Q9UFD9 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
RIMBP3Q9UFD9 BMS1P4-201ENST00000441263 1332 ntBASIC20.09■□□□□ 0.81
RIMBP3Q9UFD9 SLC25A30-207ENST00000539591 3608 ntTSL 2 BASIC20.09■□□□□ 0.81
RIMBP3Q9UFD9 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
RIMBP3Q9UFD9 AP001267.2-201ENST00000532619 2086 ntBASIC20.09■□□□□ 0.81
RIMBP3Q9UFD9 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC20.09■□□□□ 0.81
RIMBP3Q9UFD9 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RIMBP3Q9UFD9 LINGO1-AS1-201ENST00000558691 1720 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
RIMBP3Q9UFD9 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
RIMBP3Q9UFD9 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC20.09■□□□□ 0.81
RIMBP3Q9UFD9 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC20.09■□□□□ 0.81
RIMBP3Q9UFD9 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RIMBP3Q9UFD9 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
RIMBP3Q9UFD9 C14orf159-202ENST00000298858 642 ntTSL 5 BASIC20.09■□□□□ 0.81
RIMBP3Q9UFD9 AP001271.1-201ENST00000445532 206 ntTSL 3 BASIC20.09■□□□□ 0.81
RIMBP3Q9UFD9 IGHV3-64-201ENST00000454421 431 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
RIMBP3Q9UFD9 AC073517.1-201ENST00000468165 541 ntTSL 4 BASIC20.09■□□□□ 0.81
RIMBP3Q9UFD9 AC104051.1-201ENST00000520426 570 ntTSL 4 BASIC20.09■□□□□ 0.81
RIMBP3Q9UFD9 AC108471.2-202ENST00000529094 498 ntTSL 5 BASIC20.09■□□□□ 0.81
RIMBP3Q9UFD9 GSKIP-203ENST00000554182 760 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
RIMBP3Q9UFD9 AC135776.3-201ENST00000570988 427 ntBASIC20.09■□□□□ 0.81
RIMBP3Q9UFD9 ZNF544-203ENST00000594384 588 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
RIMBP3Q9UFD9 AC005387.2-201ENST00000596596 440 ntTSL 3 BASIC20.09■□□□□ 0.81
RIMBP3Q9UFD9 AC242842.1-201ENST00000617712 447 ntTSL 3 BASIC20.09■□□□□ 0.81
RIMBP3Q9UFD9 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC20.09■□□□□ 0.81
RIMBP3Q9UFD9 HEBP1-203ENST00000536942 2056 ntTSL 2 BASIC20.08■□□□□ 0.81
RIMBP3Q9UFD9 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
RIMBP3Q9UFD9 TCAF1P1-201ENST00000414990 2232 ntBASIC20.08■□□□□ 0.81
RIMBP3Q9UFD9 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC20.08■□□□□ 0.81
RIMBP3Q9UFD9 RABL2A-207ENST00000409875 2282 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
RIMBP3Q9UFD9 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC20.08■□□□□ 0.81
RIMBP3Q9UFD9 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC20.08■□□□□ 0.81
RIMBP3Q9UFD9 AC008894.3-201ENST00000624324 3103 ntBASIC20.08■□□□□ 0.81
RIMBP3Q9UFD9 DMRT1-203ENST00000569227 1385 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
RIMBP3Q9UFD9 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC20.08■□□□□ 0.81
RIMBP3Q9UFD9 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.08■□□□□ 0.81
RIMBP3Q9UFD9 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC20.08■□□□□ 0.81
RIMBP3Q9UFD9 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RIMBP3Q9UFD9 GSDMB-201ENST00000309481 1500 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.81
RIMBP3Q9UFD9 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RIMBP3Q9UFD9 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
RIMBP3Q9UFD9 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 70.3 ms