Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 EPB42-203ENST00000540029 2098 ntTSL 2 BASIC14.4□□□□□ -0.1
CCDC50Q8IVM0 POLD1-205ENST00000595904 3402 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CCDC50Q8IVM0 CYYR1-201ENST00000299340 3101 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCDC50Q8IVM0 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC14.4□□□□□ -0.1
CCDC50Q8IVM0 SEC31A-205ENST00000395310 4259 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCDC50Q8IVM0 WTH3DI-201ENST00000623617 3032 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
CCDC50Q8IVM0 HPSE2-206ENST00000628193 1760 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CCDC50Q8IVM0 ZFYVE27-201ENST00000337540 2927 ntTSL 2 BASIC14.4□□□□□ -0.1
CCDC50Q8IVM0 SERF1B-204ENST00000506542 1666 ntTSL 3 BASIC14.4□□□□□ -0.1
CCDC50Q8IVM0 FCRL1-207ENST00000491942 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCDC50Q8IVM0 TNK2-208ENST00000428187 4235 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CCDC50Q8IVM0 SEMA6D-202ENST00000354744 5931 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CCDC50Q8IVM0 TDRD9-202ENST00000409874 4782 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
CCDC50Q8IVM0 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CCDC50Q8IVM0 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CCDC50Q8IVM0 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CCDC50Q8IVM0 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CCDC50Q8IVM0 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC14.4□□□□□ -0.1
CCDC50Q8IVM0 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCDC50Q8IVM0 TUBB2BP1-201ENST00000404155 871 ntBASIC14.4□□□□□ -0.1
CCDC50Q8IVM0 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CCDC50Q8IVM0 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CCDC50Q8IVM0 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC14.4□□□□□ -0.1
CCDC50Q8IVM0 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CCDC50Q8IVM0 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CCDC50Q8IVM0 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC14.4□□□□□ -0.1
CCDC50Q8IVM0 IGHV3OR16-12-201ENST00000570121 353 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
CCDC50Q8IVM0 AC068152.1-205ENST00000575173 1081 ntTSL 3 BASIC14.4□□□□□ -0.1
CCDC50Q8IVM0 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC14.4□□□□□ -0.1
CCDC50Q8IVM0 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC14.4□□□□□ -0.1
CCDC50Q8IVM0 AL645939.5-201ENST00000606834 243 ntBASIC14.4□□□□□ -0.1
CCDC50Q8IVM0 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
CCDC50Q8IVM0 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC14.4□□□□□ -0.1
CCDC50Q8IVM0 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC14.4□□□□□ -0.1
CCDC50Q8IVM0 AL033527.4-201ENST00000641026 673 ntBASIC14.4□□□□□ -0.1
CCDC50Q8IVM0 PDZRN3-208ENST00000479530 2778 ntTSL 2 BASIC14.4□□□□□ -0.1
CCDC50Q8IVM0 RBMS1-201ENST00000348849 4273 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCDC50Q8IVM0 DNAH10OS-201ENST00000514254 5040 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
CCDC50Q8IVM0 CICP9-201ENST00000444451 1913 ntBASIC14.4□□□□□ -0.1
CCDC50Q8IVM0 SHISA5-206ENST00000426002 1839 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCDC50Q8IVM0 SLC2A14-205ENST00000535295 1732 ntTSL 2 BASIC14.4□□□□□ -0.1
CCDC50Q8IVM0 IL10-202ENST00000423557 1630 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCDC50Q8IVM0 GRIPAP1-207ENST00000593475 2908 ntTSL 5 BASIC14.4□□□□□ -0.1
CCDC50Q8IVM0 FAM153C-201ENST00000398106 1510 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
CCDC50Q8IVM0 ACO2-201ENST00000216254 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCDC50Q8IVM0 MAD1L1-201ENST00000265854 2718 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCDC50Q8IVM0 USP40-201ENST00000251722 5692 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
CCDC50Q8IVM0 ZNF689-201ENST00000287461 3547 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCDC50Q8IVM0 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC14.4□□□□□ -0.1
CCDC50Q8IVM0 HARS-207ENST00000504156 3334 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.11
CCDC50Q8IVM0 DAO-201ENST00000228476 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCDC50Q8IVM0 CHI3L1-201ENST00000255409 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCDC50Q8IVM0 AC139795.2-201ENST00000499900 1751 ntTSL 2 BASIC14.39□□□□□ -0.11
CCDC50Q8IVM0 ATP11A-201ENST00000375630 8768 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
CCDC50Q8IVM0 AR-208ENST00000612452 10676 ntTSL 5 BASIC14.39□□□□□ -0.11
CCDC50Q8IVM0 CC2D1A-208ENST00000589606 3117 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCDC50Q8IVM0 TNFRSF8-203ENST00000417814 3593 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CCDC50Q8IVM0 SPG11-203ENST00000535302 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCDC50Q8IVM0 BCL2L1-203ENST00000376062 2578 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCDC50Q8IVM0 PTPRN2-203ENST00000389418 4706 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCDC50Q8IVM0 FAM225A-202ENST00000453010 5625 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CCDC50Q8IVM0 DRD2-210ENST00000544518 2473 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCDC50Q8IVM0 SMARCA2-254ENST00000636903 2471 ntTSL 5 BASIC14.39□□□□□ -0.11
CCDC50Q8IVM0 GATAD2A-201ENST00000358713 5510 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCDC50Q8IVM0 LDB3-205ENST00000429277 5436 ntTSL 2 BASIC14.39□□□□□ -0.11
CCDC50Q8IVM0 BEND6-202ENST00000370746 2379 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
CCDC50Q8IVM0 IL19-201ENST00000270218 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCDC50Q8IVM0 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCDC50Q8IVM0 ZNF277-201ENST00000361822 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCDC50Q8IVM0 RIMS1-201ENST00000264839 7055 ntTSL 5 BASIC14.39□□□□□ -0.11
CCDC50Q8IVM0 NCDN-201ENST00000356090 3433 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCDC50Q8IVM0 KCNAB2-206ENST00000378097 4201 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCDC50Q8IVM0 POLR1C-203ENST00000372389 1355 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCDC50Q8IVM0 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCDC50Q8IVM0 PES1P2-201ENST00000449745 1735 ntBASIC14.39□□□□□ -0.11
CCDC50Q8IVM0 TRMT61A-202ENST00000389749 3229 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCDC50Q8IVM0 ITGAX-201ENST00000268296 4703 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCDC50Q8IVM0 AC009501.1-201ENST00000429952 2069 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CCDC50Q8IVM0 PRICKLE1-203ENST00000455697 4277 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
CCDC50Q8IVM0 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CCDC50Q8IVM0 MIR645-201ENST00000385283 94 ntBASIC14.39□□□□□ -0.11
CCDC50Q8IVM0 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCDC50Q8IVM0 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC14.39□□□□□ -0.11
CCDC50Q8IVM0 RPS2P32-201ENST00000439199 892 ntBASIC14.39□□□□□ -0.11
CCDC50Q8IVM0 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC14.39□□□□□ -0.11
CCDC50Q8IVM0 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CCDC50Q8IVM0 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC14.39□□□□□ -0.11
CCDC50Q8IVM0 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC14.39□□□□□ -0.11
CCDC50Q8IVM0 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC14.39□□□□□ -0.11
CCDC50Q8IVM0 PFN2-206ENST00000461930 606 ntTSL 4 BASIC14.39□□□□□ -0.11
CCDC50Q8IVM0 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
CCDC50Q8IVM0 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
CCDC50Q8IVM0 AC008687.7-203ENST00000598442 551 ntTSL 4 BASIC14.39□□□□□ -0.11
CCDC50Q8IVM0 AL356417.2-202ENST00000608986 532 ntTSL 3 BASIC14.39□□□□□ -0.11
CCDC50Q8IVM0 AL008721.1-201ENST00000609964 604 ntBASIC14.39□□□□□ -0.11
CCDC50Q8IVM0 AL031673.1-201ENST00000611460 466 ntBASIC14.39□□□□□ -0.11
CCDC50Q8IVM0 NUMA1-205ENST00000393695 7343 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCDC50Q8IVM0 SH3BP2-203ENST00000442312 9211 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
CCDC50Q8IVM0 DDX12P-201ENST00000432996 2947 ntBASIC14.39□□□□□ -0.11
CCDC50Q8IVM0 RNFT2-201ENST00000257575 3882 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms