Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 LARGE1-203ENST00000402320 3955 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
MMP13P45452 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
MMP13P45452 EFHD1-203ENST00000409708 1817 ntTSL 2 BASIC14.12□□□□□ -0.15
MMP13P45452 APLP2-201ENST00000263574 3727 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
MMP13P45452 GNB5-203ENST00000396335 2678 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
MMP13P45452 NR3C1-204ENST00000394466 3245 ntAPPRIS ALT1 TSL 5 BASIC14.12□□□□□ -0.15
MMP13P45452 STAG3-206ENST00000426455 4450 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
MMP13P45452 ALG6-202ENST00000371108 3371 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
MMP13P45452 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
MMP13P45452 VPS33B-202ENST00000535906 2420 ntTSL 2 BASIC14.12□□□□□ -0.15
MMP13P45452 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
MMP13P45452 GGTA1P-202ENST00000481534 3429 ntTSL 2 BASIC14.12□□□□□ -0.15
MMP13P45452 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
MMP13P45452 DLGAP3-202ENST00000373347 3856 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
MMP13P45452 LLGL1-203ENST00000621229 3187 ntTSL 5 BASIC14.12□□□□□ -0.15
MMP13P45452 GOLGA6L10-209ENST00000621197 4160 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
MMP13P45452 TMEM25-208ENST00000524725 2630 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
MMP13P45452 C12orf76-205ENST00000548191 2204 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
MMP13P45452 DISC1-221ENST00000620189 6689 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
MMP13P45452 SLC6A10P-201ENST00000330048 3846 ntTSL 2 BASIC14.11□□□□□ -0.15
MMP13P45452 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
MMP13P45452 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
MMP13P45452 CHIAP2-201ENST00000369743 2829 ntTSL 5 BASIC14.11□□□□□ -0.15
MMP13P45452 ELAVL1-201ENST00000407627 6015 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
MMP13P45452 RFX8-201ENST00000428343 1686 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
MMP13P45452 ASCC3-203ENST00000369143 3433 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
MMP13P45452 ATP1B3-201ENST00000286371 1811 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
MMP13P45452 DBF4B-202ENST00000393547 1810 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
MMP13P45452 AP1B1-202ENST00000357586 4176 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
MMP13P45452 AC134407.3-201ENST00000624035 2139 ntBASIC14.11□□□□□ -0.15
MMP13P45452 PIGG-208ENST00000504346 3019 ntTSL 2 BASIC14.11□□□□□ -0.15
MMP13P45452 C3orf38-201ENST00000318887 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
MMP13P45452 AIF1L-205ENST00000372301 671 ntTSL 2 BASIC14.11□□□□□ -0.15
MMP13P45452 AL512430.1-201ENST00000392575 860 ntBASIC14.11□□□□□ -0.15
MMP13P45452 ACTG2-204ENST00000409918 927 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
MMP13P45452 MOCS1-207ENST00000432280 1071 ntTSL 5 BASIC14.11□□□□□ -0.15
MMP13P45452 ABLIM2-206ENST00000447017 2902 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
MMP13P45452 SERPINA13P-201ENST00000469935 1718 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
MMP13P45452 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC14.11□□□□□ -0.15
MMP13P45452 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC14.11□□□□□ -0.15
MMP13P45452 AL691482.3-201ENST00000504773 987 ntTSL 2 BASIC14.11□□□□□ -0.15
MMP13P45452 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
MMP13P45452 NAA60-214ENST00000572584 2450 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
MMP13P45452 MIR2392-201ENST00000584881 84 ntBASIC14.11□□□□□ -0.15
MMP13P45452 AC010422.5-201ENST00000597961 585 ntAPPRIS P1 TSL 4 BASIC14.11□□□□□ -0.15
MMP13P45452 GHRHR-212ENST00000611037 923 ntTSL 5 BASIC14.11□□□□□ -0.15
MMP13P45452 RAB18-208ENST00000611151 4931 ntTSL 5 BASIC14.11□□□□□ -0.15
MMP13P45452 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
MMP13P45452 GOSR2-233ENST00000640068 3103 ntTSL 5 BASIC14.11□□□□□ -0.15
MMP13P45452 CXCL5-201ENST00000296027 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
MMP13P45452 TKFC-201ENST00000394900 4696 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
MMP13P45452 NUSAP1-208ENST00000559596 1629 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
MMP13P45452 RCC2P5-201ENST00000492126 1487 ntBASIC14.11□□□□□ -0.15
MMP13P45452 NR1H3-217ENST00000467728 2731 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
MMP13P45452 GUCY1B3-202ENST00000502959 2255 ntTSL 2 BASIC14.11□□□□□ -0.15
MMP13P45452 ELOVL6-201ENST00000302274 3090 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
MMP13P45452 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
MMP13P45452 LINC01024-201ENST00000499203 2769 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
MMP13P45452 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
MMP13P45452 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
MMP13P45452 NLRP2-202ENST00000339757 3422 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
MMP13P45452 PLA1A-206ENST00000495992 1695 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
MMP13P45452 MS4A15-201ENST00000337911 1536 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
MMP13P45452 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
MMP13P45452 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
MMP13P45452 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
MMP13P45452 SLC26A6-205ENST00000395550 2589 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
MMP13P45452 KIF17-202ENST00000375044 3572 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
MMP13P45452 RBM47-201ENST00000295971 4056 ntAPPRIS ALT1 TSL 5 BASIC14.1□□□□□ -0.15
MMP13P45452 PARP10-205ENST00000525773 3404 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
MMP13P45452 PRPF4-201ENST00000374198 2787 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
MMP13P45452 VPS54-203ENST00000409558 4337 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
MMP13P45452 OR2V1-201ENST00000329365 948 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
MMP13P45452 AC106827.1-201ENST00000366454 431 ntBASIC14.1□□□□□ -0.15
MMP13P45452 AP000356.3-201ENST00000382243 753 ntBASIC14.1□□□□□ -0.15
MMP13P45452 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC14.1□□□□□ -0.15
MMP13P45452 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
MMP13P45452 AL121845.1-201ENST00000447343 464 ntTSL 2 BASIC14.1□□□□□ -0.15
MMP13P45452 AL355803.1-201ENST00000455524 188 ntTSL 2 BASIC14.1□□□□□ -0.15
MMP13P45452 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
MMP13P45452 RN7SL767P-201ENST00000493013 295 ntBASIC14.1□□□□□ -0.15
MMP13P45452 SOCS2-AS1-204ENST00000551626 618 ntTSL 4 BASIC14.1□□□□□ -0.15
MMP13P45452 KRT8P2-201ENST00000556193 944 ntBASIC14.1□□□□□ -0.15
MMP13P45452 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC14.1□□□□□ -0.15
MMP13P45452 LINC01543-201ENST00000578367 900 ntTSL 5 BASIC14.1□□□□□ -0.15
MMP13P45452 GAS7-216ENST00000583882 553 ntTSL 5 BASIC14.1□□□□□ -0.15
MMP13P45452 AC106872.11-201ENST00000605838 421 ntBASIC14.1□□□□□ -0.15
MMP13P45452 MTUS1-229ENST00000634613 1193 ntTSL 5 BASIC14.1□□□□□ -0.15
MMP13P45452 AC092028.1-202ENST00000641483 3547 ntBASIC14.1□□□□□ -0.15
MMP13P45452 AC092028.1-201ENST00000641781 3540 ntBASIC14.1□□□□□ -0.15
MMP13P45452 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
MMP13P45452 SPAST-201ENST00000315285 5117 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
MMP13P45452 AC098934.1-201ENST00000443294 1835 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
MMP13P45452 MEP1A-201ENST00000230588 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
MMP13P45452 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
MMP13P45452 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
MMP13P45452 ETAA1-201ENST00000272342 3418 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
MMP13P45452 CCDC178-201ENST00000300227 3087 ntAPPRIS P3 TSL 2 BASIC14.1□□□□□ -0.15
MMP13P45452 FAM13B-203ENST00000425075 3098 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
MMP13P45452 BCL2L1-202ENST00000376055 2383 ntTSL 2 BASIC14.1□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 605.8 ms