Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 AC093627.2-201ENST00000497017 568 ntTSL 4 BASIC14.18□□□□□ -0.14
SLC1A1P43005 OR5BD1P-201ENST00000532527 817 ntBASIC14.18□□□□□ -0.14
SLC1A1P43005 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC14.18□□□□□ -0.14
SLC1A1P43005 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC14.18□□□□□ -0.14
SLC1A1P43005 LOXL1-AS1-207ENST00000565689 735 ntTSL 3 BASIC14.18□□□□□ -0.14
SLC1A1P43005 OCEL1-206ENST00000597836 1044 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
SLC1A1P43005 AC026304.1-201ENST00000597953 561 ntBASIC14.18□□□□□ -0.14
SLC1A1P43005 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SLC1A1P43005 SLC5A4-201ENST00000266086 2030 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SLC1A1P43005 ATG7-213ENST00000446450 2042 ntTSL 2 BASIC14.18□□□□□ -0.14
SLC1A1P43005 PPT2-EGFL8-202ENST00000422437 4181 ntAPPRIS P5 TSL 5 BASIC14.18□□□□□ -0.14
SLC1A1P43005 CD300LB-202ENST00000392621 2286 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
SLC1A1P43005 C17orf53-203ENST00000585683 2529 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
SLC1A1P43005 CPLX2-201ENST00000359546 5023 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SLC1A1P43005 ARHGEF17-201ENST00000263674 7853 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SLC1A1P43005 KRT8P42-201ENST00000405771 1399 ntBASIC14.18□□□□□ -0.14
SLC1A1P43005 FAM168A-204ENST00000450446 1364 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SLC1A1P43005 AC020907.1-201ENST00000616460 1350 ntBASIC14.18□□□□□ -0.14
SLC1A1P43005 SLC1A1-201ENST00000262352 3722 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SLC1A1P43005 BDH1-202ENST00000392378 3455 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SLC1A1P43005 FAM167A-201ENST00000284486 4094 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SLC1A1P43005 AC024560.1-201ENST00000424493 1471 ntTSL 3 BASIC14.18□□□□□ -0.14
SLC1A1P43005 PRKAB1-206ENST00000541640 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SLC1A1P43005 SMTN-203ENST00000358743 3198 ntAPPRIS P4 TSL 2 BASIC14.18□□□□□ -0.14
SLC1A1P43005 TRIM40-207ENST00000396581 2086 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
SLC1A1P43005 HACD3-210ENST00000568793 1824 ntTSL 5 BASIC14.18□□□□□ -0.14
SLC1A1P43005 AL449403.1-201ENST00000432783 1577 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SLC1A1P43005 ATP6V0D1-218ENST00000602876 1554 ntTSL 5 BASIC14.17□□□□□ -0.14
SLC1A1P43005 PCGF2-202ENST00000611883 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SLC1A1P43005 C12orf65-204ENST00000429587 1326 ntAPPRIS P2 TSL 2 BASIC14.17□□□□□ -0.14
SLC1A1P43005 FAM156B-201ENST00000416841 2537 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
SLC1A1P43005 HPX-201ENST00000265983 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SLC1A1P43005 PIGC-202ENST00000367728 2630 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
SLC1A1P43005 CES1-201ENST00000360526 2006 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
SLC1A1P43005 GRIA3-208ENST00000620581 2991 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SLC1A1P43005 PSME4-202ENST00000404125 7099 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SLC1A1P43005 EGR2-202ENST00000411732 2824 ntTSL 2 BASIC14.17□□□□□ -0.14
SLC1A1P43005 CDCA7L-201ENST00000356195 2915 ntTSL 2 BASIC14.17□□□□□ -0.14
SLC1A1P43005 ZNF571-AS1-203ENST00000586139 2684 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SLC1A1P43005 AP000229.1-201ENST00000608591 1979 ntTSL 4 BASIC14.17□□□□□ -0.14
SLC1A1P43005 SRSF5-201ENST00000394366 1638 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SLC1A1P43005 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
SLC1A1P43005 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SLC1A1P43005 G0S2-201ENST00000367029 866 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SLC1A1P43005 SSR4-202ENST00000370085 526 ntTSL 2 BASIC14.17□□□□□ -0.14
SLC1A1P43005 HCRTR1-201ENST00000373705 1170 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SLC1A1P43005 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC14.17□□□□□ -0.14
SLC1A1P43005 AC073210.1-201ENST00000414799 232 ntBASIC14.17□□□□□ -0.14
SLC1A1P43005 AC041040.1-201ENST00000425197 460 ntBASIC14.17□□□□□ -0.14
SLC1A1P43005 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC14.17□□□□□ -0.14
SLC1A1P43005 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC14.17□□□□□ -0.14
SLC1A1P43005 AL121845.1-201ENST00000447343 464 ntTSL 2 BASIC14.17□□□□□ -0.14
SLC1A1P43005 AC019118.1-201ENST00000454530 435 ntTSL 3 BASIC14.17□□□□□ -0.14
SLC1A1P43005 PGAP2-212ENST00000464906 1259 ntTSL 2 BASIC14.17□□□□□ -0.14
SLC1A1P43005 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC14.17□□□□□ -0.14
SLC1A1P43005 NUP210P1-202ENST00000504322 710 ntBASIC14.17□□□□□ -0.14
SLC1A1P43005 AL691482.3-201ENST00000504773 987 ntTSL 2 BASIC14.17□□□□□ -0.14
SLC1A1P43005 AC022113.2-201ENST00000504935 704 ntTSL 3 BASIC14.17□□□□□ -0.14
SLC1A1P43005 SRP19-206ENST00000515463 660 ntTSL 3 BASIC14.17□□□□□ -0.14
SLC1A1P43005 RN7SKP155-201ENST00000516031 288 ntBASIC14.17□□□□□ -0.14
SLC1A1P43005 BATF-202ENST00000555504 361 ntTSL 2 BASIC14.17□□□□□ -0.14
SLC1A1P43005 IFI27L1-211ENST00000557066 580 ntTSL 3 BASIC14.17□□□□□ -0.14
SLC1A1P43005 ZNF843-202ENST00000564218 3816 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
SLC1A1P43005 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
SLC1A1P43005 C19orf53-202ENST00000588234 873 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SLC1A1P43005 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
SLC1A1P43005 MIR8071-1-201ENST00000616769 65 ntBASIC14.17□□□□□ -0.14
SLC1A1P43005 MIR8071-2-201ENST00000616772 65 ntBASIC14.17□□□□□ -0.14
SLC1A1P43005 NCOR2-202ENST00000404121 7175 ntTSL 5 BASIC14.17□□□□□ -0.14
SLC1A1P43005 MYNN-201ENST00000349841 4999 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SLC1A1P43005 NFKBIZ-202ENST00000326172 3923 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
SLC1A1P43005 AC009501.1-201ENST00000429952 2069 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SLC1A1P43005 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
SLC1A1P43005 AC068075.1-201ENST00000519714 1832 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SLC1A1P43005 CA6-205ENST00000480186 1493 ntTSL 2 BASIC14.17□□□□□ -0.14
SLC1A1P43005 ANKDD1A-207ENST00000496660 1477 ntTSL 2 BASIC14.17□□□□□ -0.14
SLC1A1P43005 GTPBP4-202ENST00000360803 5075 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SLC1A1P43005 ARL8B-202ENST00000419534 1684 ntTSL 2 BASIC14.17□□□□□ -0.14
SLC1A1P43005 MKRN2-203ENST00000448482 1679 ntTSL 5 BASIC14.17□□□□□ -0.14
SLC1A1P43005 ZNF606-204ENST00000547828 2680 ntTSL 2 BASIC14.17□□□□□ -0.14
SLC1A1P43005 PDXDC1-218ENST00000627450 2683 ntTSL 2 BASIC14.17□□□□□ -0.14
SLC1A1P43005 ADGRA1-201ENST00000392606 3438 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SLC1A1P43005 ALPK3-201ENST00000258888 10917 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SLC1A1P43005 AL357060.2-202ENST00000606998 1959 ntTSL 2 BASIC14.16□□□□□ -0.14
SLC1A1P43005 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SLC1A1P43005 MGAT1-205ENST00000446023 3175 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
SLC1A1P43005 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
SLC1A1P43005 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
SLC1A1P43005 Z99774.1-201ENST00000382641 2613 ntTSL 2 BASIC14.16□□□□□ -0.14
SLC1A1P43005 RAB37-204ENST00000392613 2617 ntAPPRIS ALT1 TSL 2 BASIC14.16□□□□□ -0.14
SLC1A1P43005 TICRR-201ENST00000268138 6775 ntAPPRIS P3 TSL 5 BASIC14.16□□□□□ -0.14
SLC1A1P43005 SELENBP1-208ENST00000447402 1530 ntTSL 2 BASIC14.16□□□□□ -0.14
SLC1A1P43005 GBAP1-208ENST00000566701 1546 ntBASIC14.16□□□□□ -0.14
SLC1A1P43005 LAS1L-201ENST00000374804 2261 ntTSL 2 BASIC14.16□□□□□ -0.14
SLC1A1P43005 NFIX-201ENST00000358552 1727 ntTSL 5 BASIC14.16□□□□□ -0.14
SLC1A1P43005 YTHDF3-201ENST00000517371 3122 ntTSL 3 BASIC14.16□□□□□ -0.14
SLC1A1P43005 ANKRD36-204ENST00000461153 6102 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
SLC1A1P43005 VRK3-209ENST00000594948 1847 ntAPPRIS P3 TSL 2 BASIC14.16□□□□□ -0.14
SLC1A1P43005 NDRG4-201ENST00000258187 3324 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SLC1A1P43005 FAM193A-201ENST00000324666 4846 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms