Protein–RNA interactions for Protein: P08908

HTR1A, 5-hydroxytryptamine receptor 1A, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1AP08908 RALGPS1-201ENST00000259351 6336 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
HTR1AP08908 RAPGEF6-207ENST00000507093 5742 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
HTR1AP08908 SHC1-203ENST00000368449 2879 ntTSL 5 BASIC12.39□□□□□ -0.43
HTR1AP08908 SLC25A20-202ENST00000430379 1576 ntTSL 3 BASIC12.39□□□□□ -0.43
HTR1AP08908 SOGA1-201ENST00000237536 14371 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
HTR1AP08908 KCNH6-201ENST00000314672 3062 ntAPPRIS ALT2 TSL 2 BASIC12.39□□□□□ -0.43
HTR1AP08908 RAB6A-202ENST00000336083 3085 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
HTR1AP08908 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
HTR1AP08908 RFX5-202ENST00000368870 2459 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
HTR1AP08908 ADAMTSL2-202ENST00000393060 3725 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
HTR1AP08908 PTK7-204ENST00000349241 3801 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
HTR1AP08908 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
HTR1AP08908 CACNA1G-211ENST00000503485 6768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
HTR1AP08908 CEP85L-203ENST00000368491 7673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
HTR1AP08908 POM121L4P-202ENST00000427789 1891 ntBASIC12.38□□□□□ -0.43
HTR1AP08908 PLEKHA2-207ENST00000616834 3594 ntTSL 5 BASIC12.38□□□□□ -0.43
HTR1AP08908 DOK4-210ENST00000566936 2851 ntTSL 3 BASIC12.38□□□□□ -0.43
HTR1AP08908 COASY-202ENST00000421097 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
HTR1AP08908 KCNIP1-210ENST00000636734 1613 ntTSL 5 BASIC12.38□□□□□ -0.43
HTR1AP08908 BCDIN3D-AS1-201ENST00000548872 3078 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
HTR1AP08908 NBR1-205ENST00000589872 3097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
HTR1AP08908 OR52A1-202ENST00000380367 9783 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
HTR1AP08908 AC120114.4-201ENST00000623731 2194 ntBASIC12.38□□□□□ -0.43
HTR1AP08908 KRT26-201ENST00000335552 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
HTR1AP08908 SMAD2-203ENST00000402690 12075 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
HTR1AP08908 C3orf56-201ENST00000624688 1740 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
HTR1AP08908 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC12.38□□□□□ -0.43
HTR1AP08908 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
HTR1AP08908 LBX2-201ENST00000341396 886 ntTSL 3 BASIC12.38□□□□□ -0.43
HTR1AP08908 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
HTR1AP08908 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
HTR1AP08908 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
HTR1AP08908 POM121L10P-201ENST00000436994 1285 ntBASIC12.38□□□□□ -0.43
HTR1AP08908 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC12.38□□□□□ -0.43
HTR1AP08908 LINC02369-202ENST00000540745 801 ntTSL 5 BASIC12.38□□□□□ -0.43
HTR1AP08908 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
HTR1AP08908 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC12.38□□□□□ -0.43
HTR1AP08908 AL160314.3-201ENST00000556041 767 ntBASIC12.38□□□□□ -0.43
HTR1AP08908 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC12.38□□□□□ -0.43
HTR1AP08908 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC12.38□□□□□ -0.43
HTR1AP08908 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC12.38□□□□□ -0.43
HTR1AP08908 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
HTR1AP08908 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC12.38□□□□□ -0.43
HTR1AP08908 ATP6AP1-210ENST00000619046 2823 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
HTR1AP08908 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC12.38□□□□□ -0.43
HTR1AP08908 SYK-204ENST00000375754 5005 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
HTR1AP08908 PRKACB-205ENST00000370688 1905 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
HTR1AP08908 PTPRK-207ENST00000368226 6087 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
HTR1AP08908 HNRNPF-202ENST00000356053 2670 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
HTR1AP08908 PIM1-201ENST00000373509 2650 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
HTR1AP08908 AC008609.1-202ENST00000501818 2686 ntTSL 2 BASIC12.38□□□□□ -0.43
HTR1AP08908 HNRNPF-207ENST00000544000 2676 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
HTR1AP08908 RHBDL2-201ENST00000289248 2129 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
HTR1AP08908 GIMAP1-GIMAP5-201ENST00000611999 2148 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
HTR1AP08908 RNF123-203ENST00000433785 1555 ntTSL 5 BASIC12.38□□□□□ -0.43
HTR1AP08908 NRADDP-202ENST00000641269 1585 ntBASIC12.38□□□□□ -0.43
HTR1AP08908 ATIC-201ENST00000236959 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
HTR1AP08908 ATP6V1B1-201ENST00000234396 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
HTR1AP08908 GPR12-202ENST00000405846 4850 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
HTR1AP08908 SLC25A25-205ENST00000432073 3678 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
HTR1AP08908 MPP4-204ENST00000409143 2082 ntTSL 2 BASIC12.38□□□□□ -0.43
HTR1AP08908 VANGL1-201ENST00000310260 2265 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
HTR1AP08908 SAP18-201ENST00000382533 2298 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
HTR1AP08908 DUSP16-201ENST00000228862 3402 ntTSL 5 BASIC12.37□□□□□ -0.43
HTR1AP08908 MBOAT4-201ENST00000320542 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
HTR1AP08908 EFHD1-204ENST00000410095 1538 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
HTR1AP08908 HSPA12A-205ENST00000635765 5841 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
HTR1AP08908 XAB2-201ENST00000358368 2667 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
HTR1AP08908 SERPINA1-205ENST00000404814 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
HTR1AP08908 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
HTR1AP08908 MUC1-225ENST00000612778 1836 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
HTR1AP08908 GZF1-202ENST00000377051 4740 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
HTR1AP08908 RTFDC1-202ENST00000357348 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
HTR1AP08908 STX16-NPEPL1-202ENST00000530122 3433 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
HTR1AP08908 MIGA2-201ENST00000358369 3637 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
HTR1AP08908 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
HTR1AP08908 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
HTR1AP08908 AL512384.1-201ENST00000406683 331 ntBASIC12.37□□□□□ -0.43
HTR1AP08908 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC12.37□□□□□ -0.43
HTR1AP08908 AC079178.1-201ENST00000420915 656 ntBASIC12.37□□□□□ -0.43
HTR1AP08908 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
HTR1AP08908 PTPA-220ENST00000436883 532 ntTSL 4 BASIC12.37□□□□□ -0.43
HTR1AP08908 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC12.37□□□□□ -0.43
HTR1AP08908 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC12.37□□□□□ -0.43
HTR1AP08908 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
HTR1AP08908 MYOZ3-205ENST00000520112 605 ntTSL 4 BASIC12.37□□□□□ -0.43
HTR1AP08908 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
HTR1AP08908 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
HTR1AP08908 EIF2B1-205ENST00000539951 848 ntTSL 5 BASIC12.37□□□□□ -0.43
HTR1AP08908 AC026369.2-201ENST00000540136 1101 ntTSL 3 BASIC12.37□□□□□ -0.43
HTR1AP08908 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC12.37□□□□□ -0.43
HTR1AP08908 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC12.37□□□□□ -0.43
HTR1AP08908 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC12.37□□□□□ -0.43
HTR1AP08908 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC12.37□□□□□ -0.43
HTR1AP08908 RN7SL455P-201ENST00000580629 282 ntBASIC12.37□□□□□ -0.43
HTR1AP08908 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC12.37□□□□□ -0.43
HTR1AP08908 KLKP1-202ENST00000597246 1125 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
HTR1AP08908 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC12.37□□□□□ -0.43
HTR1AP08908 AC091271.1-201ENST00000611877 1162 ntBASIC12.37□□□□□ -0.43
HTR1AP08908 SHOC2-202ENST00000369452 3943 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms