Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 CWC27-201ENST00000381070 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TPM3P06753 STK40-203ENST00000373130 3628 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TPM3P06753 BAIAP2L1-201ENST00000005260 3622 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TPM3P06753 UGT1A5-201ENST00000373414 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TPM3P06753 EGFR-AS1-201ENST00000442411 2806 ntTSL 2 BASIC15.25■□□□□ 0.03
TPM3P06753 NPPA-202ENST00000376480 855 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
TPM3P06753 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
TPM3P06753 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TPM3P06753 AC006987.1-201ENST00000413610 527 ntBASIC15.25■□□□□ 0.03
TPM3P06753 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC15.25■□□□□ 0.03
TPM3P06753 FLJ37035-201ENST00000419400 446 ntTSL 3 BASIC15.25■□□□□ 0.03
TPM3P06753 CTBP2P5-201ENST00000454986 1264 ntBASIC15.25■□□□□ 0.03
TPM3P06753 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC15.25■□□□□ 0.03
TPM3P06753 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC15.25■□□□□ 0.03
TPM3P06753 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC15.25■□□□□ 0.03
TPM3P06753 AC115099.1-201ENST00000570413 362 ntTSL 3 BASIC15.25■□□□□ 0.03
TPM3P06753 AC027796.2-201ENST00000575326 344 ntBASIC15.25■□□□□ 0.03
TPM3P06753 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
TPM3P06753 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC15.25■□□□□ 0.03
TPM3P06753 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC15.25■□□□□ 0.03
TPM3P06753 ABCA2-223ENST00000614293 8146 ntTSL 5 BASIC15.25■□□□□ 0.03
TPM3P06753 SH2D7-201ENST00000328828 2750 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
TPM3P06753 NLRP2-201ENST00000263437 3496 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
TPM3P06753 FBXO44-202ENST00000251547 2903 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TPM3P06753 ZNF701-204ENST00000540331 5538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
TPM3P06753 CLTC-202ENST00000393043 5292 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TPM3P06753 AL845472.1-202ENST00000624675 4080 ntBASIC15.25■□□□□ 0.03
TPM3P06753 ALDOA-202ENST00000395240 1447 ntAPPRIS ALT1 TSL 5 BASIC15.25■□□□□ 0.03
TPM3P06753 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC15.25■□□□□ 0.03
TPM3P06753 MOB3C-201ENST00000271139 2800 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TPM3P06753 SESN2-201ENST00000253063 3453 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TPM3P06753 PCDHGA9-201ENST00000573521 4605 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
TPM3P06753 HIST1H2BH-201ENST00000619466 2060 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
TPM3P06753 FERMT2-202ENST00000343279 3247 ntTSL 5 BASIC15.24■□□□□ 0.03
TPM3P06753 ACSF3-201ENST00000317447 3664 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
TPM3P06753 PLAT-202ENST00000352041 2516 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TPM3P06753 IP6K1-202ENST00000395238 4117 ntTSL 3 BASIC15.24■□□□□ 0.03
TPM3P06753 NDRG1-222ENST00000522476 1385 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TPM3P06753 MAP7-208ENST00000617204 4536 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
TPM3P06753 SCARA5-202ENST00000380385 2934 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TPM3P06753 GALT-201ENST00000378842 1768 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TPM3P06753 RNF219-AS1-209ENST00000606429 2418 ntTSL 2 BASIC15.24■□□□□ 0.03
TPM3P06753 CHTF18-201ENST00000262315 3090 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
TPM3P06753 DDO-201ENST00000368923 1953 ntTSL 2 BASIC15.24■□□□□ 0.03
TPM3P06753 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TPM3P06753 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TPM3P06753 EPS8L3-201ENST00000361852 2130 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TPM3P06753 TBL1X-202ENST00000380961 4674 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TPM3P06753 GRIA4-202ENST00000393125 2994 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TPM3P06753 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC15.24■□□□□ 0.03
TPM3P06753 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TPM3P06753 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TPM3P06753 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC15.24■□□□□ 0.03
TPM3P06753 RN7SL277P-201ENST00000481521 288 ntBASIC15.24■□□□□ 0.03
TPM3P06753 FADS2-212ENST00000522639 360 ntTSL 5 BASIC15.24■□□□□ 0.03
TPM3P06753 HNRNPA1P48-202ENST00000565308 961 ntBASIC15.24■□□□□ 0.03
TPM3P06753 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC15.24■□□□□ 0.03
TPM3P06753 FADS2-215ENST00000574708 385 ntTSL 3 BASIC15.24■□□□□ 0.03
TPM3P06753 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC15.24■□□□□ 0.03
TPM3P06753 AC025048.6-201ENST00000634326 1161 ntBASIC15.24■□□□□ 0.03
TPM3P06753 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TPM3P06753 GAS8-201ENST00000268699 3185 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TPM3P06753 RNGTT-202ENST00000369485 4553 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TPM3P06753 TMEM134-201ENST00000308022 3534 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
TPM3P06753 SQSTM1-201ENST00000360718 2253 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TPM3P06753 KLC4-201ENST00000259708 2688 ntAPPRIS P4 TSL 2 BASIC15.24■□□□□ 0.03
TPM3P06753 IFFO1-206ENST00000465801 2850 ntTSL 5 BASIC15.24■□□□□ 0.03
TPM3P06753 KCNH1-205ENST00000638498 3479 ntTSL 5 BASIC15.24■□□□□ 0.03
TPM3P06753 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC15.24■□□□□ 0.03
TPM3P06753 AC006144.1-201ENST00000424220 1600 ntBASIC15.24■□□□□ 0.03
TPM3P06753 PPARG-205ENST00000397010 2017 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TPM3P06753 ZMIZ1-202ENST00000446377 6686 ntTSL 5 BASIC15.24■□□□□ 0.03
TPM3P06753 REPS1-205ENST00000415951 2424 ntTSL 5 BASIC15.24■□□□□ 0.03
TPM3P06753 PLEKHM1P1-205ENST00000582986 5014 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TPM3P06753 KCNJ14-202ENST00000391884 3990 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TPM3P06753 APOBR-202ENST00000564831 3792 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
TPM3P06753 PCDHGA12-201ENST00000252085 4747 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
TPM3P06753 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
TPM3P06753 CUL2-210ENST00000626172 4115 ntTSL 5 BASIC15.24■□□□□ 0.03
TPM3P06753 MAGED1-201ENST00000326587 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TPM3P06753 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TPM3P06753 ATL2-201ENST00000378954 2868 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TPM3P06753 NLRX1-214ENST00000525863 2850 ntTSL 5 BASIC15.23■□□□□ 0.03
TPM3P06753 CAPRIN1-212ENST00000532820 3438 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
TPM3P06753 YWHAB-201ENST00000353703 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TPM3P06753 DFFB-205ENST00000378209 3028 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TPM3P06753 PCDHB2-201ENST00000194155 4126 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
TPM3P06753 GOLGA8A-201ENST00000359187 1877 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
TPM3P06753 ANKRD20A7P-201ENST00000402318 2414 ntBASIC15.23■□□□□ 0.03
TPM3P06753 SLC25A24-203ENST00000565488 4271 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TPM3P06753 EPM2A-218ENST00000639465 2203 ntTSL 5 BASIC15.23■□□□□ 0.03
TPM3P06753 NLGN3-206ENST00000612180 3319 ntTSL 5 BASIC15.23■□□□□ 0.03
TPM3P06753 ARHGAP33-203ENST00000314737 3858 ntAPPRIS P3 TSL 2 BASIC15.23■□□□□ 0.03
TPM3P06753 BRD7P5-201ENST00000299197 1822 ntBASIC15.23■□□□□ 0.03
TPM3P06753 LOXHD1-204ENST00000398705 1824 ntTSL 2 BASIC15.23■□□□□ 0.03
TPM3P06753 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TPM3P06753 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC15.23■□□□□ 0.03
TPM3P06753 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TPM3P06753 MPV17-206ENST00000402722 827 ntTSL 3 BASIC15.23■□□□□ 0.03
TPM3P06753 ALKBH2-203ENST00000440112 574 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 69.2 ms