Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 COQ10BP2-201ENST00000513804 724 ntBASIC12.51□□□□□ -0.41
CLDN20P56880 TMCO5B-205ENST00000530020 894 ntBASIC12.51□□□□□ -0.41
CLDN20P56880 CR383656.3-201ENST00000551315 183 ntBASIC12.51□□□□□ -0.41
CLDN20P56880 AC068867.1-201ENST00000559855 150 ntBASIC12.51□□□□□ -0.41
CLDN20P56880 TUBB8P7-202ENST00000564451 2115 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CLDN20P56880 TMEM219-204ENST00000566848 1292 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CLDN20P56880 AIPL1-211ENST00000576776 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
CLDN20P56880 MIR4722-201ENST00000578292 60 ntBASIC12.51□□□□□ -0.41
CLDN20P56880 RN7SL470P-201ENST00000583069 259 ntBASIC12.51□□□□□ -0.41
CLDN20P56880 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC12.51□□□□□ -0.41
CLDN20P56880 LAMTOR5-AS1-209ENST00000597455 805 ntBASIC12.51□□□□□ -0.41
CLDN20P56880 AC073911.3-201ENST00000624401 631 ntBASIC12.51□□□□□ -0.41
CLDN20P56880 PACSIN2-202ENST00000337959 3149 ntTSL 5 BASIC12.51□□□□□ -0.41
CLDN20P56880 ADAMTSL2-201ENST00000354484 4068 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CLDN20P56880 CCL5-201ENST00000603197 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CLDN20P56880 STK38L-201ENST00000389032 5068 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CLDN20P56880 HDAC7-203ENST00000380610 3261 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
CLDN20P56880 COL2A1-201ENST00000337299 4257 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
CLDN20P56880 PPP1R1B-202ENST00000394265 1419 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CLDN20P56880 IGFN1-201ENST00000295591 4439 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
CLDN20P56880 SUPV3L1-201ENST00000359655 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CLDN20P56880 MTHFSD-204ENST00000546093 2451 ntTSL 2 BASIC12.51□□□□□ -0.41
CLDN20P56880 IMMT-212ENST00000620815 1520 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CLDN20P56880 VAMP7-202ENST00000286448 2646 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CLDN20P56880 TMEM9-203ENST00000367333 1564 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
CLDN20P56880 Z98885.2-201ENST00000565177 1567 ntTSL 2 BASIC12.51□□□□□ -0.41
CLDN20P56880 FAM9C-205ENST00000542843 5858 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CLDN20P56880 LAIR1-209ENST00000434277 1645 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
CLDN20P56880 RIPK4-201ENST00000332512 3889 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CLDN20P56880 ZNF772-204ENST00000427512 5130 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CLDN20P56880 MCRIP1-212ENST00000576730 2979 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
CLDN20P56880 SFI1-208ENST00000432498 4162 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
CLDN20P56880 ZIK1-204ENST00000597850 4181 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
CLDN20P56880 TBC1D24-201ENST00000293970 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CLDN20P56880 PBXIP1-203ENST00000368465 3144 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
CLDN20P56880 TEX26-AS1-205ENST00000585870 2053 ntTSL 2 BASIC12.5□□□□□ -0.41
CLDN20P56880 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
CLDN20P56880 NFATC1-204ENST00000397790 3453 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CLDN20P56880 AC004623.1-201ENST00000624592 2127 ntBASIC12.5□□□□□ -0.41
CLDN20P56880 PGM3-201ENST00000283977 2219 ntTSL 5 BASIC12.5□□□□□ -0.41
CLDN20P56880 EPM2A-218ENST00000639465 2203 ntTSL 5 BASIC12.5□□□□□ -0.41
CLDN20P56880 ZBED2-201ENST00000317012 2311 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
CLDN20P56880 NRDC-202ENST00000354831 3895 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
CLDN20P56880 NCLN-201ENST00000246117 4005 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CLDN20P56880 PTK7-205ENST00000352931 4023 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CLDN20P56880 TRPC7-202ENST00000378459 2406 ntTSL 5 BASIC12.5□□□□□ -0.41
CLDN20P56880 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CLDN20P56880 AC021218.1-201ENST00000377722 2536 ntTSL 2 BASIC12.5□□□□□ -0.41
CLDN20P56880 CATSPERD-202ENST00000381624 2516 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CLDN20P56880 PLAT-203ENST00000429089 2599 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
CLDN20P56880 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CLDN20P56880 PRPF4-201ENST00000374198 2787 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
CLDN20P56880 RC3H2-201ENST00000335387 3081 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CLDN20P56880 RBM10-202ENST00000345781 3108 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
CLDN20P56880 SECISBP2-201ENST00000339901 3320 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CLDN20P56880 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CLDN20P56880 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CLDN20P56880 APLP2-201ENST00000263574 3727 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
CLDN20P56880 PPIE-202ENST00000356511 1079 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CLDN20P56880 RNVU1-8-201ENST00000364272 125 ntBASIC12.5□□□□□ -0.41
CLDN20P56880 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC12.5□□□□□ -0.41
CLDN20P56880 GSTT2B-202ENST00000404172 819 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CLDN20P56880 CRYBB3-202ENST00000404334 601 ntTSL 3 BASIC12.5□□□□□ -0.41
CLDN20P56880 AC112721.1-201ENST00000409162 588 ntTSL 3 BASIC12.5□□□□□ -0.41
CLDN20P56880 OR52M2P-201ENST00000414298 959 ntBASIC12.5□□□□□ -0.41
CLDN20P56880 RPSAP31-201ENST00000416648 895 ntBASIC12.5□□□□□ -0.41
CLDN20P56880 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CLDN20P56880 EEF1DP2-201ENST00000433698 843 ntBASIC12.5□□□□□ -0.41
CLDN20P56880 AC253536.3-201ENST00000444093 558 ntTSL 3 BASIC12.5□□□□□ -0.41
CLDN20P56880 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC12.5□□□□□ -0.41
CLDN20P56880 ALG10B-203ENST00000551464 571 ntTSL 3 BASIC12.5□□□□□ -0.41
CLDN20P56880 SMIM6-201ENST00000556126 866 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
CLDN20P56880 NPM1P43-201ENST00000558669 786 ntBASIC12.5□□□□□ -0.41
CLDN20P56880 MAFTRR-203ENST00000567993 685 ntTSL 3 BASIC12.5□□□□□ -0.41
CLDN20P56880 SNORD3B-1-201ENST00000577988 758 ntBASIC12.5□□□□□ -0.41
CLDN20P56880 RPL19-207ENST00000582193 792 ntAPPRIS ALT1 TSL 5 BASIC12.5□□□□□ -0.41
CLDN20P56880 RN7SL555P-201ENST00000584742 339 ntBASIC12.5□□□□□ -0.41
CLDN20P56880 AC020934.2-201ENST00000592400 456 ntTSL 3 BASIC12.5□□□□□ -0.41
CLDN20P56880 AL359091.4-201ENST00000610052 409 ntBASIC12.5□□□□□ -0.41
CLDN20P56880 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC12.5□□□□□ -0.41
CLDN20P56880 MTUS1-229ENST00000634613 1193 ntTSL 5 BASIC12.5□□□□□ -0.41
CLDN20P56880 AC011491.1-203ENST00000637688 543 ntBASIC12.5□□□□□ -0.41
CLDN20P56880 ALDH3A2-201ENST00000176643 3928 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
CLDN20P56880 TMEM177-202ENST00000401466 1346 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
CLDN20P56880 C12orf65-204ENST00000429587 1326 ntAPPRIS P2 TSL 2 BASIC12.5□□□□□ -0.41
CLDN20P56880 ANXA5-202ENST00000501272 1363 ntTSL 5 BASIC12.5□□□□□ -0.41
CLDN20P56880 SLC25A19-205ENST00000442286 1496 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
CLDN20P56880 CNBP-205ENST00000500450 1516 ntTSL 2 BASIC12.5□□□□□ -0.41
CLDN20P56880 FGD4-203ENST00000472289 1629 ntTSL 2 BASIC12.5□□□□□ -0.41
CLDN20P56880 DAO-201ENST00000228476 1756 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CLDN20P56880 SDR9C7-201ENST00000293502 1765 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CLDN20P56880 IFT172-202ENST00000359466 2207 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CLDN20P56880 MUC20-203ENST00000436408 2463 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
CLDN20P56880 ZIK1-201ENST00000307468 2510 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CLDN20P56880 ACO2-201ENST00000216254 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CLDN20P56880 GFPT2-201ENST00000253778 3093 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CLDN20P56880 FAM118A-201ENST00000216214 3458 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
CLDN20P56880 PSKH1-201ENST00000291041 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CLDN20P56880 MAMDC4-201ENST00000317446 3658 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
CLDN20P56880 VHL-201ENST00000256474 3737 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 83.8 ms