Protein–RNA interactions for Protein: P48730

CSNK1D, Casein kinase I isoform delta, humanhuman

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1DP48730 VPS28-210ENST00000529182 1010 ntTSL 2 BASIC13.51□□□□□ -0.25
CSNK1DP48730 APOPT1-215ENST00000556253 783 ntTSL 3 BASIC13.51□□□□□ -0.25
CSNK1DP48730 DNM1P51-201ENST00000558149 522 ntBASIC13.51□□□□□ -0.25
CSNK1DP48730 SRP14-204ENST00000558720 780 ntTSL 2 BASIC13.51□□□□□ -0.25
CSNK1DP48730 MFSD12-215ENST00000615613 688 ntBASIC13.51□□□□□ -0.25
CSNK1DP48730 GLUD1P2-203ENST00000631118 486 ntTSL 3 BASIC13.51□□□□□ -0.25
CSNK1DP48730 LINC01002-234ENST00000633808 848 ntTSL 5 BASIC13.51□□□□□ -0.25
CSNK1DP48730 CCDC197-205ENST00000636493 1279 ntAPPRIS P5 TSL 5 BASIC13.51□□□□□ -0.25
CSNK1DP48730 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CSNK1DP48730 BIVM-202ENST00000448849 3198 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CSNK1DP48730 PIGG-217ENST00000509768 3121 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CSNK1DP48730 IWS1-201ENST00000295321 2958 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CSNK1DP48730 LSS-201ENST00000356396 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CSNK1DP48730 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CSNK1DP48730 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CSNK1DP48730 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC13.51□□□□□ -0.25
CSNK1DP48730 KIF9-208ENST00000452770 2707 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CSNK1DP48730 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC13.51□□□□□ -0.25
CSNK1DP48730 GIPC3-201ENST00000322315 4335 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CSNK1DP48730 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC13.51□□□□□ -0.25
CSNK1DP48730 ZNF436-AS1-201ENST00000335648 2547 ntBASIC13.51□□□□□ -0.25
CSNK1DP48730 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC13.51□□□□□ -0.25
CSNK1DP48730 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC13.51□□□□□ -0.25
CSNK1DP48730 FUT6-205ENST00000527106 2211 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CSNK1DP48730 INHBC-201ENST00000309668 1992 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CSNK1DP48730 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
CSNK1DP48730 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC13.5□□□□□ -0.25
CSNK1DP48730 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CSNK1DP48730 TRNAU1AP-201ENST00000373830 1799 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CSNK1DP48730 HAO1-201ENST00000378789 1777 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CSNK1DP48730 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
CSNK1DP48730 CDH1-201ENST00000261769 4889 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CSNK1DP48730 LIMS1-204ENST00000409441 1627 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CSNK1DP48730 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
CSNK1DP48730 L3MBTL1-202ENST00000373134 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
CSNK1DP48730 LINC01623-201ENST00000440244 2458 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CSNK1DP48730 STK16-202ENST00000409260 1493 ntTSL 5 BASIC13.5□□□□□ -0.25
CSNK1DP48730 BEND3P3-201ENST00000611030 2440 ntBASIC13.5□□□□□ -0.25
CSNK1DP48730 DAXX-203ENST00000414083 2355 ntTSL 2 BASIC13.5□□□□□ -0.25
CSNK1DP48730 KRT8P38-201ENST00000441370 1430 ntBASIC13.5□□□□□ -0.25
CSNK1DP48730 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
CSNK1DP48730 AC107918.4-201ENST00000641966 3141 ntBASIC13.5□□□□□ -0.25
CSNK1DP48730 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC13.5□□□□□ -0.25
CSNK1DP48730 PTPN6-202ENST00000399448 2159 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
CSNK1DP48730 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
CSNK1DP48730 OR4S1-201ENST00000319988 930 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
CSNK1DP48730 C6orf48-202ENST00000375635 610 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
CSNK1DP48730 C6orf48-209ENST00000395789 952 ntAPPRIS P1 TSL 3 BASIC13.5□□□□□ -0.25
CSNK1DP48730 NPPC-202ENST00000409852 1051 ntAPPRIS P1 TSL 3 BASIC13.5□□□□□ -0.25
CSNK1DP48730 SIX3-AS1-201ENST00000419364 844 ntTSL 2 BASIC13.5□□□□□ -0.25
CSNK1DP48730 OR51A9P-201ENST00000422578 911 ntBASIC13.5□□□□□ -0.25
CSNK1DP48730 AL158166.1-201ENST00000433110 371 ntTSL 2 BASIC13.5□□□□□ -0.25
CSNK1DP48730 VENTXP4-201ENST00000449029 958 ntBASIC13.5□□□□□ -0.25
CSNK1DP48730 LINC00173-201ENST00000470091 435 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CSNK1DP48730 RN7SL147P-201ENST00000487345 298 ntBASIC13.5□□□□□ -0.25
CSNK1DP48730 PRDM2-213ENST00000503842 705 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CSNK1DP48730 AP003031.2-205ENST00000531263 683 ntTSL 2 BASIC13.5□□□□□ -0.25
CSNK1DP48730 PIGH-210ENST00000560722 903 ntAPPRIS ALT1 TSL 2 BASIC13.5□□□□□ -0.25
CSNK1DP48730 LINC02252-201ENST00000565706 487 ntTSL 3 BASIC13.5□□□□□ -0.25
CSNK1DP48730 LINC00514-203ENST00000573465 313 ntTSL 5 BASIC13.5□□□□□ -0.25
CSNK1DP48730 AC055811.3-201ENST00000584952 686 ntBASIC13.5□□□□□ -0.25
CSNK1DP48730 AC008736.2-201ENST00000587554 516 ntTSL 2 BASIC13.5□□□□□ -0.25
CSNK1DP48730 AC010632.2-201ENST00000588369 1224 ntBASIC13.5□□□□□ -0.25
CSNK1DP48730 AC003070.1-201ENST00000592389 457 ntTSL 2 BASIC13.5□□□□□ -0.25
CSNK1DP48730 AC011462.2-201ENST00000598887 344 ntTSL 5 BASIC13.5□□□□□ -0.25
CSNK1DP48730 AL139823.1-201ENST00000641871 1225 ntBASIC13.5□□□□□ -0.25
CSNK1DP48730 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
CSNK1DP48730 MAP2K3-203ENST00000361818 2034 ntTSL 5 BASIC13.5□□□□□ -0.25
CSNK1DP48730 AC114271.1-201ENST00000612689 2813 ntBASIC13.5□□□□□ -0.25
CSNK1DP48730 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CSNK1DP48730 HRH2-202ENST00000377291 2561 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CSNK1DP48730 TFEB-205ENST00000394283 2595 ntTSL 2 BASIC13.5□□□□□ -0.25
CSNK1DP48730 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
CSNK1DP48730 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC13.5□□□□□ -0.25
CSNK1DP48730 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CSNK1DP48730 FAM168A-202ENST00000356467 1767 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CSNK1DP48730 SLC26A8-202ENST00000394602 3144 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CSNK1DP48730 BPIFB1-201ENST00000253354 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CSNK1DP48730 TRGV9-201ENST00000444775 1735 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
CSNK1DP48730 ZFHX4-AS1-201ENST00000518143 1711 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CSNK1DP48730 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CSNK1DP48730 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CSNK1DP48730 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CSNK1DP48730 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
CSNK1DP48730 ARF4-201ENST00000303436 1660 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CSNK1DP48730 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CSNK1DP48730 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CSNK1DP48730 SERPINA1-205ENST00000404814 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CSNK1DP48730 DDC-206ENST00000431062 1620 ntTSL 5 BASIC13.5□□□□□ -0.25
CSNK1DP48730 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
CSNK1DP48730 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
CSNK1DP48730 PGM3-201ENST00000283977 2219 ntTSL 5 BASIC13.49□□□□□ -0.25
CSNK1DP48730 GTF2F2-201ENST00000340473 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CSNK1DP48730 NCF2-201ENST00000367535 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CSNK1DP48730 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC13.49□□□□□ -0.25
CSNK1DP48730 SFTPA1-203ENST00000428376 2141 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CSNK1DP48730 AC104758.3-203ENST00000562938 2123 ntBASIC13.49□□□□□ -0.25
CSNK1DP48730 GTF2I-215ENST00000614986 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CSNK1DP48730 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
CSNK1DP48730 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 422.4 ms