Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
CNOT4O95628 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
CNOT4O95628 ARAP3-203ENST00000508305 4927 ntTSL 2 BASIC12.17□□□□□ -0.46
CNOT4O95628 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
CNOT4O95628 NME7-203ENST00000472647 1590 ntAPPRIS ALT2 TSL 2 BASIC12.17□□□□□ -0.46
CNOT4O95628 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC12.17□□□□□ -0.46
CNOT4O95628 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC12.17□□□□□ -0.46
CNOT4O95628 KCNS2-202ENST00000521839 4340 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
CNOT4O95628 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CNOT4O95628 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CNOT4O95628 SGMS1-203ENST00000429490 3634 ntTSL 5 BASIC12.17□□□□□ -0.46
CNOT4O95628 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC12.17□□□□□ -0.46
CNOT4O95628 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
CNOT4O95628 ARFGEF1-201ENST00000262215 7225 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CNOT4O95628 SERPINB6-206ENST00000380546 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CNOT4O95628 SLC7A8-214ENST00000621729 1371 ntTSL 5 BASIC12.17□□□□□ -0.46
CNOT4O95628 ARAP1-204ENST00000393609 5145 ntAPPRIS ALT2 TSL 2 BASIC12.17□□□□□ -0.46
CNOT4O95628 SLC16A1-201ENST00000369626 3910 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CNOT4O95628 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CNOT4O95628 FAM153C-201ENST00000398106 1510 ntAPPRIS ALT2 TSL 2 BASIC12.16□□□□□ -0.46
CNOT4O95628 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
CNOT4O95628 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
CNOT4O95628 COL6A3-206ENST00000409809 8916 ntTSL 5 BASIC12.16□□□□□ -0.46
CNOT4O95628 GALC-206ENST00000544807 2528 ntTSL 2 BASIC12.16□□□□□ -0.46
CNOT4O95628 ARID4A-202ENST00000355431 5891 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CNOT4O95628 AC239798.2-201ENST00000415338 3540 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
CNOT4O95628 NIPA1-207ENST00000561183 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
CNOT4O95628 MYT1-201ENST00000328439 5535 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
CNOT4O95628 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC12.16□□□□□ -0.46
CNOT4O95628 BAHD1-203ENST00000561234 4698 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CNOT4O95628 GPR161-209ENST00000539777 7655 ntTSL 2 BASIC12.16□□□□□ -0.46
CNOT4O95628 RB1-201ENST00000267163 4840 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CNOT4O95628 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
CNOT4O95628 LAMA1-209ENST00000638611 1310 ntTSL 5 BASIC12.16□□□□□ -0.46
CNOT4O95628 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CNOT4O95628 AC020917.4-201ENST00000623994 1999 ntBASIC12.16□□□□□ -0.46
CNOT4O95628 STK38L-201ENST00000389032 5068 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CNOT4O95628 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CNOT4O95628 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC12.16□□□□□ -0.46
CNOT4O95628 FOXK1-201ENST00000328914 11181 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
CNOT4O95628 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
CNOT4O95628 CIC-204ENST00000572681 8218 ntTSL 5 BASIC12.16□□□□□ -0.46
CNOT4O95628 TBR1-201ENST00000389554 4009 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CNOT4O95628 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC12.16□□□□□ -0.46
CNOT4O95628 STRIP2-201ENST00000249344 5115 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CNOT4O95628 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CNOT4O95628 HDLBP-214ENST00000427183 6238 ntTSL 2 BASIC12.16□□□□□ -0.46
CNOT4O95628 CST1-201ENST00000304749 760 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CNOT4O95628 INO80C-202ENST00000334598 974 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CNOT4O95628 LCE3B-201ENST00000335633 288 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
CNOT4O95628 NUPL2-202ENST00000410002 680 ntTSL 2 BASIC12.16□□□□□ -0.46
CNOT4O95628 SEPT7-AS1-201ENST00000412856 587 ntTSL 4 BASIC12.16□□□□□ -0.46
CNOT4O95628 LINC01433-201ENST00000419003 697 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
CNOT4O95628 BCAS2P2-201ENST00000425064 674 ntBASIC12.16□□□□□ -0.46
CNOT4O95628 EFNA4-203ENST00000427683 1052 ntAPPRIS ALT2 TSL 2 BASIC12.16□□□□□ -0.46
CNOT4O95628 AL663074.1-201ENST00000436642 299 ntTSL 3 BASIC12.16□□□□□ -0.46
CNOT4O95628 TCERG1L-AS1-201ENST00000436942 472 ntTSL 2 BASIC12.16□□□□□ -0.46
CNOT4O95628 BX072579.1-201ENST00000449453 344 ntTSL 3 BASIC12.16□□□□□ -0.46
CNOT4O95628 FAHD2CP-203ENST00000467292 965 ntTSL 2 BASIC12.16□□□□□ -0.46
CNOT4O95628 MUTYH-231ENST00000488731 740 ntTSL 5 BASIC12.16□□□□□ -0.46
CNOT4O95628 AC084752.1-201ENST00000509766 622 ntBASIC12.16□□□□□ -0.46
CNOT4O95628 C8orf31-207ENST00000524181 1199 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
CNOT4O95628 VENTXP3-201ENST00000546480 773 ntBASIC12.16□□□□□ -0.46
CNOT4O95628 C14orf132-201ENST00000553764 562 ntTSL 4 BASIC12.16□□□□□ -0.46
CNOT4O95628 ACTN1-AS1-202ENST00000553961 599 ntTSL 4 BASIC12.16□□□□□ -0.46
CNOT4O95628 ADSSL1-208ENST00000555674 520 ntTSL 3 BASIC12.16□□□□□ -0.46
CNOT4O95628 AC009119.2-201ENST00000561562 723 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
CNOT4O95628 MIR4472-1-201ENST00000584349 80 ntBASIC12.16□□□□□ -0.46
CNOT4O95628 MIA-206ENST00000597784 455 ntAPPRIS P1 TSL 3 BASIC12.16□□□□□ -0.46
CNOT4O95628 AC002044.2-201ENST00000624910 970 ntBASIC12.16□□□□□ -0.46
CNOT4O95628 APOL5-201ENST00000249044 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CNOT4O95628 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CNOT4O95628 MARK2P9-201ENST00000430958 1727 ntBASIC12.16□□□□□ -0.46
CNOT4O95628 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
CNOT4O95628 ITPR3-202ENST00000605930 9029 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CNOT4O95628 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC12.16□□□□□ -0.46
CNOT4O95628 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
CNOT4O95628 FURIN-206ENST00000610579 4191 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
CNOT4O95628 DAXX-201ENST00000266000 2606 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
CNOT4O95628 DCAF13-209ENST00000616836 2639 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
CNOT4O95628 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC12.16□□□□□ -0.46
CNOT4O95628 JUN-201ENST00000371222 3540 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
CNOT4O95628 SLC44A3-AS1-215ENST00000634870 5956 ntTSL 5 BASIC12.16□□□□□ -0.46
CNOT4O95628 ASGR1-209ENST00000619926 1384 ntTSL 5 BASIC12.16□□□□□ -0.46
CNOT4O95628 GPHN-203ENST00000478722 4297 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
CNOT4O95628 AL357143.1-202ENST00000640531 5777 ntTSL 5 BASIC12.16□□□□□ -0.46
CNOT4O95628 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CNOT4O95628 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC12.16□□□□□ -0.46
CNOT4O95628 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC12.16□□□□□ -0.46
CNOT4O95628 WASF3-202ENST00000361042 4823 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
CNOT4O95628 DGCR2-201ENST00000263196 4480 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CNOT4O95628 DGCR2-206ENST00000545799 4484 ntTSL 5 BASIC12.15□□□□□ -0.46
CNOT4O95628 CLCN7-203ENST00000448525 4151 ntTSL 2 BASIC12.15□□□□□ -0.46
CNOT4O95628 BRAP-202ENST00000419234 4026 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CNOT4O95628 STRA6-202ENST00000395105 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CNOT4O95628 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC12.15□□□□□ -0.46
CNOT4O95628 BCAS4-202ENST00000371608 6680 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
CNOT4O95628 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
CNOT4O95628 PRKACB-205ENST00000370688 1905 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
CNOT4O95628 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 70.5 ms