Protein–RNA interactions for Protein: O00533

CHL1, Neural cell adhesion molecule L1-like protein, humanhuman

Predictions only

Length 1,208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1O00533 PILRA-205ENST00000453419 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CHL1O00533 AC114812.4-201ENST00000506676 757 ntBASIC17.16■□□□□ 0.34
CHL1O00533 AC015712.5-201ENST00000558568 564 ntTSL 2 BASIC17.16■□□□□ 0.34
CHL1O00533 AC009055.1-201ENST00000562656 781 ntTSL 3 BASIC17.16■□□□□ 0.34
CHL1O00533 AC079414.2-201ENST00000567157 1104 ntBASIC17.16■□□□□ 0.34
CHL1O00533 TLE2-205ENST00000586422 389 ntTSL 5 BASIC17.16■□□□□ 0.34
CHL1O00533 AC004528.1-201ENST00000588380 641 ntTSL 5 BASIC17.16■□□□□ 0.34
CHL1O00533 AC025048.4-201ENST00000589740 699 ntTSL 3 BASIC17.16■□□□□ 0.34
CHL1O00533 AC008750.5-201ENST00000595500 473 ntTSL 2 BASIC17.16■□□□□ 0.34
CHL1O00533 ETV2-207ENST00000619399 994 ntTSL 5 BASIC17.16■□□□□ 0.34
CHL1O00533 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CHL1O00533 SERPINA1-205ENST00000404814 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CHL1O00533 ZSCAN32-203ENST00000396852 3169 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CHL1O00533 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CHL1O00533 AC079781.5-202ENST00000641784 3743 ntBASIC17.16■□□□□ 0.34
CHL1O00533 MPPE1-204ENST00000344987 1831 ntTSL 5 BASIC17.16■□□□□ 0.34
CHL1O00533 ARMCX6-201ENST00000361910 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CHL1O00533 L3MBTL1-202ENST00000373134 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CHL1O00533 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CHL1O00533 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CHL1O00533 TTC4-201ENST00000371281 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CHL1O00533 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CHL1O00533 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CHL1O00533 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CHL1O00533 AP003969.2-201ENST00000623739 2275 ntBASIC17.16■□□□□ 0.34
CHL1O00533 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CHL1O00533 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
CHL1O00533 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CHL1O00533 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC17.15■□□□□ 0.34
CHL1O00533 DYNC1I2-204ENST00000409317 2196 ntTSL 5 BASIC17.15■□□□□ 0.34
CHL1O00533 APP-205ENST00000358918 2366 ntTSL 5 BASIC17.15■□□□□ 0.34
CHL1O00533 PPT1-213ENST00000641319 2388 ntBASIC17.15■□□□□ 0.34
CHL1O00533 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
CHL1O00533 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CHL1O00533 C20orf96-203ENST00000400269 1608 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CHL1O00533 AC009093.9-201ENST00000566038 1611 ntBASIC17.15■□□□□ 0.34
CHL1O00533 LINC01679-201ENST00000442815 2798 ntTSL 3 BASIC17.15■□□□□ 0.34
CHL1O00533 VASH2-202ENST00000366964 2960 ntTSL 5 BASIC17.15■□□□□ 0.34
CHL1O00533 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
CHL1O00533 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
CHL1O00533 SUPT20HL1-201ENST00000436466 2618 ntBASIC17.15■□□□□ 0.34
CHL1O00533 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
CHL1O00533 MLPH-201ENST00000264605 3823 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
CHL1O00533 RNASE10-201ENST00000328444 717 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
CHL1O00533 ECHDC2-201ENST00000358358 1126 ntTSL 2 BASIC17.15■□□□□ 0.34
CHL1O00533 TMEM95-202ENST00000389982 1191 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CHL1O00533 RPL15-208ENST00000435882 1063 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
CHL1O00533 PSME2P2-201ENST00000453033 700 ntBASIC17.15■□□□□ 0.34
CHL1O00533 DMKN-244ENST00000480502 820 ntAPPRIS ALT2 TSL 3 BASIC17.15■□□□□ 0.34
CHL1O00533 BCRP4-201ENST00000506079 804 ntBASIC17.15■□□□□ 0.34
CHL1O00533 PRDX2P3-201ENST00000515779 586 ntBASIC17.15■□□□□ 0.34
CHL1O00533 AC023051.2-201ENST00000541141 460 ntBASIC17.15■□□□□ 0.34
CHL1O00533 PNPT1-207ENST00000625249 216 ntTSL 5 BASIC17.15■□□□□ 0.34
CHL1O00533 GLUD1P2-203ENST00000631118 486 ntTSL 3 BASIC17.15■□□□□ 0.34
CHL1O00533 FRG2EP-201ENST00000634243 835 ntBASIC17.15■□□□□ 0.34
CHL1O00533 AL160287.1-203ENST00000637960 1061 ntBASIC17.15■□□□□ 0.34
CHL1O00533 CD1A-201ENST00000289429 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CHL1O00533 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CHL1O00533 CDC14B-201ENST00000375240 2547 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CHL1O00533 UBA3-201ENST00000349511 2112 ntAPPRIS ALT1 TSL 2 BASIC17.15■□□□□ 0.34
CHL1O00533 SMUG1-220ENST00000513838 2119 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CHL1O00533 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CHL1O00533 LYPLA1-202ENST00000343231 1308 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CHL1O00533 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CHL1O00533 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC17.15■□□□□ 0.34
CHL1O00533 PRPSAP1-206ENST00000446526 3660 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CHL1O00533 LILRP2-202ENST00000413572 1383 ntBASIC17.15■□□□□ 0.34
CHL1O00533 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CHL1O00533 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CHL1O00533 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
CHL1O00533 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC17.14■□□□□ 0.34
CHL1O00533 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC17.14■□□□□ 0.34
CHL1O00533 LINC01623-201ENST00000440244 2458 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
CHL1O00533 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CHL1O00533 MTMR11-201ENST00000369140 2324 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
CHL1O00533 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
CHL1O00533 TRIM39-RPP21-201ENST00000623385 1698 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
CHL1O00533 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CHL1O00533 CICP17-201ENST00000418553 2377 ntBASIC17.14■□□□□ 0.33
CHL1O00533 ATF4P4-201ENST00000393544 1930 ntBASIC17.14■□□□□ 0.33
CHL1O00533 CLUHP8-201ENST00000547527 1485 ntBASIC17.14■□□□□ 0.33
CHL1O00533 NDUFB11-201ENST00000276062 948 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CHL1O00533 AC008080.1-201ENST00000311067 1058 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CHL1O00533 TAC4-203ENST00000352793 564 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CHL1O00533 ULBP3-201ENST00000367339 988 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
CHL1O00533 TRAPPC3-201ENST00000373159 590 ntTSL 3 BASIC17.14■□□□□ 0.33
CHL1O00533 MRPL55-219ENST00000391867 685 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
CHL1O00533 KCNE1-202ENST00000399284 666 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
CHL1O00533 LINC00483-202ENST00000419688 558 ntTSL 3 BASIC17.14■□□□□ 0.33
CHL1O00533 DEPDC1-AS1-201ENST00000428732 1247 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CHL1O00533 HNRNPA1P10-201ENST00000444945 962 ntBASIC17.14■□□□□ 0.33
CHL1O00533 DUX4L31-201ENST00000446466 1136 ntBASIC17.14■□□□□ 0.33
CHL1O00533 AC234582.2-201ENST00000455788 568 ntTSL 3 BASIC17.14■□□□□ 0.33
CHL1O00533 SNHG17-208ENST00000456953 546 ntTSL 3 BASIC17.14■□□□□ 0.33
CHL1O00533 RN7SL684P-201ENST00000465665 294 ntBASIC17.14■□□□□ 0.33
CHL1O00533 RPS18P9-201ENST00000482817 460 ntBASIC17.14■□□□□ 0.33
CHL1O00533 ZNF816-208ENST00000535506 529 ntTSL 4 BASIC17.14■□□□□ 0.33
CHL1O00533 AC131009.2-201ENST00000542763 770 ntTSL 3 BASIC17.14■□□□□ 0.33
CHL1O00533 TPM1-220ENST00000559556 977 ntAPPRIS ALT1 TSL 2 BASIC17.14■□□□□ 0.33
CHL1O00533 AL132801.1-201ENST00000559675 567 ntTSL 4 BASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms