Protein–RNA interactions for Protein: E9PAV3

NACA, Nascent polypeptide-associated complex subunit alpha, muscle-specific form, humanhuman

Predictions only

Length 2,078 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NACAE9PAV3 GRIA4-201ENST00000282499 5508 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
NACAE9PAV3 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
NACAE9PAV3 CAMSAP2-202ENST00000358823 7352 ntAPPRIS P3 TSL 5 BASIC10.07□□□□□ -0.8
NACAE9PAV3 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC10.07□□□□□ -0.8
NACAE9PAV3 TECTA-201ENST00000264037 6468 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
NACAE9PAV3 ANKRD20A19P-202ENST00000442969 2796 ntTSL 2 BASIC10.07□□□□□ -0.8
NACAE9PAV3 PACSIN1-207ENST00000620693 4299 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
NACAE9PAV3 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC10.07□□□□□ -0.8
NACAE9PAV3 GNAI2-203ENST00000422163 2407 ntTSL 2 BASIC10.07□□□□□ -0.8
NACAE9PAV3 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC10.07□□□□□ -0.8
NACAE9PAV3 RERG-201ENST00000256953 2264 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
NACAE9PAV3 CCDC138-203ENST00000412964 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
NACAE9PAV3 LINC01271-201ENST00000441214 2250 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
NACAE9PAV3 MSRA-201ENST00000317173 1536 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
NACAE9PAV3 CDH4-203ENST00000614565 6513 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
NACAE9PAV3 RERG-204ENST00000536465 2134 ntAPPRIS P1 TSL 3 BASIC10.07□□□□□ -0.8
NACAE9PAV3 ZNF236-201ENST00000253159 8124 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
NACAE9PAV3 ADAMTSL2-202ENST00000393060 3725 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
NACAE9PAV3 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
NACAE9PAV3 MANBA-202ENST00000505239 2577 ntTSL 2 BASIC10.07□□□□□ -0.8
NACAE9PAV3 TBCD-201ENST00000355528 7168 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
NACAE9PAV3 SLC4A5-201ENST00000346834 6233 ntAPPRIS P4 TSL 5 BASIC10.07□□□□□ -0.8
NACAE9PAV3 IL21R-204ENST00000564089 3009 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
NACAE9PAV3 BCAR1-203ENST00000393422 4064 ntAPPRIS ALT2 TSL 2 BASIC10.07□□□□□ -0.8
NACAE9PAV3 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
NACAE9PAV3 TESPA1-201ENST00000316577 1898 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
NACAE9PAV3 PPP2R1B-204ENST00000426998 1888 ntAPPRIS ALT2 TSL 2 BASIC10.07□□□□□ -0.8
NACAE9PAV3 PDE7B-203ENST00000615259 5234 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
NACAE9PAV3 PDE4C-204ENST00000539010 1699 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
NACAE9PAV3 FRMD6-203ENST00000395718 4828 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
NACAE9PAV3 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
NACAE9PAV3 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
NACAE9PAV3 APOD-201ENST00000343267 1130 ntAPPRIS P2 TSL 1 (best) BASIC10.06□□□□□ -0.8
NACAE9PAV3 NUDT2-201ENST00000346365 960 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
NACAE9PAV3 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
NACAE9PAV3 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
NACAE9PAV3 NUDT2-202ENST00000379155 1002 ntAPPRIS P1 TSL 3 BASIC10.06□□□□□ -0.8
NACAE9PAV3 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
NACAE9PAV3 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
NACAE9PAV3 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC10.06□□□□□ -0.8
NACAE9PAV3 RERG-205ENST00000537647 935 ntTSL 2 BASIC10.06□□□□□ -0.8
NACAE9PAV3 NUDT2-204ENST00000618590 825 ntAPPRIS P1 TSL 3 BASIC10.06□□□□□ -0.8
NACAE9PAV3 PLAT-203ENST00000429089 2599 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
NACAE9PAV3 PCDHB2-201ENST00000194155 4126 ntAPPRIS P1 BASIC10.06□□□□□ -0.8
NACAE9PAV3 UQCRFS1-201ENST00000304863 3475 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
NACAE9PAV3 TBC1D22B-201ENST00000373491 3462 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
NACAE9PAV3 C2-206ENST00000442278 2434 ntTSL 2 BASIC10.06□□□□□ -0.8
NACAE9PAV3 SRPK3-208ENST00000489426 4479 ntAPPRIS ALT2 TSL 2 BASIC10.06□□□□□ -0.8
NACAE9PAV3 GMPR2-206ENST00000557854 2025 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
NACAE9PAV3 ZFC3H1-201ENST00000378743 7285 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
NACAE9PAV3 TADA3-204ENST00000440161 1617 ntAPPRIS P1 TSL 2 BASIC10.06□□□□□ -0.8
NACAE9PAV3 CCDC126-202ENST00000409765 2324 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
NACAE9PAV3 SLC48A1-201ENST00000442218 3010 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
NACAE9PAV3 MSH2-206ENST00000543555 3024 ntTSL 2 BASIC10.06□□□□□ -0.8
NACAE9PAV3 DPY19L2P2-205ENST00000439473 3994 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
NACAE9PAV3 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
NACAE9PAV3 POPDC2-201ENST00000264231 1679 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
NACAE9PAV3 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC10.06□□□□□ -0.8
NACAE9PAV3 LILRB2-202ENST00000391746 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
NACAE9PAV3 TP73-203ENST00000357733 4899 ntTSL 5 BASIC10.06□□□□□ -0.8
NACAE9PAV3 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
NACAE9PAV3 MSNP1-201ENST00000511640 1732 ntBASIC10.06□□□□□ -0.8
NACAE9PAV3 MAP4K2-201ENST00000294066 7178 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
NACAE9PAV3 TMEM170A-201ENST00000357613 4959 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
NACAE9PAV3 ZIK1-201ENST00000307468 2510 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
NACAE9PAV3 TMEM40-205ENST00000435575 1785 ntAPPRIS ALT2 TSL 2 BASIC10.06□□□□□ -0.8
NACAE9PAV3 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
NACAE9PAV3 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
NACAE9PAV3 OPN1MW2-201ENST00000369929 1261 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
NACAE9PAV3 ELK2AP-201ENST00000392510 1007 ntBASIC10.06□□□□□ -0.8
NACAE9PAV3 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
NACAE9PAV3 LBH-202ENST00000401506 485 ntTSL 3 BASIC10.06□□□□□ -0.8
NACAE9PAV3 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
NACAE9PAV3 AL365295.1-203ENST00000435322 566 ntTSL 4 BASIC10.06□□□□□ -0.8
NACAE9PAV3 AC012441.2-201ENST00000444843 739 ntBASIC10.06□□□□□ -0.8
NACAE9PAV3 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC10.06□□□□□ -0.8
NACAE9PAV3 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC10.06□□□□□ -0.8
NACAE9PAV3 RN7SL67P-201ENST00000492147 296 ntBASIC10.06□□□□□ -0.8
NACAE9PAV3 AC005740.1-201ENST00000515639 522 ntBASIC10.06□□□□□ -0.8
NACAE9PAV3 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC10.06□□□□□ -0.8
NACAE9PAV3 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
NACAE9PAV3 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
NACAE9PAV3 STUB1-204ENST00000564370 875 ntTSL 2 BASIC10.06□□□□□ -0.8
NACAE9PAV3 MIR3188-201ENST00000583494 85 ntBASIC10.06□□□□□ -0.8
NACAE9PAV3 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC10.06□□□□□ -0.8
NACAE9PAV3 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC10.06□□□□□ -0.8
NACAE9PAV3 ADAMTSL4-AS1-203ENST00000617352 1036 ntTSL 5 BASIC10.06□□□□□ -0.8
NACAE9PAV3 AC244452.3-201ENST00000636814 210 ntBASIC10.06□□□□□ -0.8
NACAE9PAV3 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
NACAE9PAV3 KRT17P4-205ENST00000579946 2555 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
NACAE9PAV3 SLC46A1-207ENST00000612814 6376 ntAPPRIS P1 TSL 2 BASIC10.06□□□□□ -0.8
NACAE9PAV3 GLP2R-204ENST00000574745 1882 ntTSL 2 BASIC10.06□□□□□ -0.8
NACAE9PAV3 AC144450.1-201ENST00000366424 1641 ntTSL 2 BASIC10.06□□□□□ -0.8
NACAE9PAV3 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC10.06□□□□□ -0.8
NACAE9PAV3 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
NACAE9PAV3 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
NACAE9PAV3 OS9-203ENST00000389142 2457 ntTSL 5 BASIC10.06□□□□□ -0.8
NACAE9PAV3 DNASE1-202ENST00000407479 8552 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
NACAE9PAV3 FUT6-205ENST00000527106 2211 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
NACAE9PAV3 SMG7-214ENST00000508461 3985 ntAPPRIS ALT2 TSL 2 BASIC10.06□□□□□ -0.8
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms