Protein–RNA interactions for Protein: P09429

HMGB1, High mobility group protein B1, humanhuman

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P09429 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC16.02■□□□□ 0.15
HMGB1P09429 PBXIP1-203ENST00000368465 3144 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.15
HMGB1P09429 ARHGEF33-202ENST00000409978 4484 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
HMGB1P09429 AC021218.1-201ENST00000377722 2536 ntTSL 2 BASIC16.02■□□□□ 0.15
HMGB1P09429 TREH-202ENST00000397925 1718 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
HMGB1P09429 CYB5A-202ENST00000340533 3283 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
HMGB1P09429 BEND7-201ENST00000341083 2239 ntAPPRIS P3 TSL 2 BASIC16.02■□□□□ 0.15
HMGB1P09429 Z97653.2-201ENST00000623057 1418 ntBASIC16.02■□□□□ 0.15
HMGB1P09429 TMBIM1-202ENST00000396809 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
HMGB1P09429 CALD1-205ENST00000422748 2665 ntTSL 2 BASIC16.02■□□□□ 0.15
HMGB1P09429 SLC16A1-201ENST00000369626 3910 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
HMGB1P09429 EXOC6B-201ENST00000272427 5918 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
HMGB1P09429 ARGLU1-203ENST00000400198 3390 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
HMGB1P09429 SERPINA1-205ENST00000404814 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
HMGB1P09429 SLC1A5-202ENST00000434726 1872 ntTSL 2 BASIC16.01■□□□□ 0.15
HMGB1P09429 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
HMGB1P09429 TMEM131L-202ENST00000409663 5017 ntAPPRIS P3 TSL 5 BASIC16.01■□□□□ 0.15
HMGB1P09429 OPLAH-204ENST00000618853 4031 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
HMGB1P09429 BEST1-208ENST00000534553 1829 ntTSL 2 BASIC16.01■□□□□ 0.15
HMGB1P09429 AL031587.5-201ENST00000624344 1849 ntBASIC16.01■□□□□ 0.15
HMGB1P09429 KDELR1-201ENST00000330720 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
HMGB1P09429 PTN-202ENST00000393083 1599 ntTSL 5 BASIC16.01■□□□□ 0.15
HMGB1P09429 METTL6-202ENST00000383790 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
HMGB1P09429 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
HMGB1P09429 BCL2-201ENST00000333681 3209 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
HMGB1P09429 UBE3A-209ENST00000625778 3217 ntTSL 5 BASIC16.01■□□□□ 0.15
HMGB1P09429 VMP1-201ENST00000262291 2712 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
HMGB1P09429 CAPN5-201ENST00000278559 4397 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
HMGB1P09429 TMEM9-202ENST00000367332 1544 ntAPPRIS ALT1 TSL 2 BASIC16.01■□□□□ 0.15
HMGB1P09429 GBAP1-208ENST00000566701 1546 ntBASIC16.01■□□□□ 0.15
HMGB1P09429 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
HMGB1P09429 AGBL2-205ENST00000528244 2929 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
HMGB1P09429 GRIN1-207ENST00000371560 3640 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
HMGB1P09429 PRKAR1A-203ENST00000392711 4327 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
HMGB1P09429 TPI1P3-201ENST00000335020 740 ntBASIC16.01■□□□□ 0.15
HMGB1P09429 UQCC2-201ENST00000374214 432 ntTSL 5 BASIC16.01■□□□□ 0.15
HMGB1P09429 PDCD5-202ENST00000379316 154 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
HMGB1P09429 UFM1-202ENST00000379649 846 ntTSL 4 BASIC16.01■□□□□ 0.15
HMGB1P09429 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC16.01■□□□□ 0.15
HMGB1P09429 SERF2-204ENST00000402131 586 ntTSL 2 BASIC16.01■□□□□ 0.15
HMGB1P09429 SNORD23-201ENST00000408876 110 ntBASIC16.01■□□□□ 0.15
HMGB1P09429 AL353658.1-201ENST00000436263 789 ntTSL 2 BASIC16.01■□□□□ 0.15
HMGB1P09429 DPY19L2P5-201ENST00000456300 331 ntBASIC16.01■□□□□ 0.15
HMGB1P09429 AL512330.1-201ENST00000456701 349 ntTSL 3 BASIC16.01■□□□□ 0.15
HMGB1P09429 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC16.01■□□□□ 0.15
HMGB1P09429 NUDCD2-202ENST00000517501 448 ntTSL 5 BASIC16.01■□□□□ 0.15
HMGB1P09429 AC103736.1-201ENST00000524410 605 ntTSL 3 BASIC16.01■□□□□ 0.15
HMGB1P09429 AC010531.4-203ENST00000561709 660 ntTSL 3 BASIC16.01■□□□□ 0.15
HMGB1P09429 NT5C-204ENST00000578337 582 ntTSL 2 BASIC16.01■□□□□ 0.15
HMGB1P09429 SPINT2-204ENST00000587090 1246 ntAPPRIS ALT2 TSL 3 BASIC16.01■□□□□ 0.15
HMGB1P09429 PDCD5-208ENST00000592786 468 ntTSL 3 BASIC16.01■□□□□ 0.15
HMGB1P09429 AC242376.2-201ENST00000619355 883 ntBASIC16.01■□□□□ 0.15
HMGB1P09429 AL353726.2-201ENST00000623259 884 ntBASIC16.01■□□□□ 0.15
HMGB1P09429 PPA1-206ENST00000625364 644 ntTSL 5 BASIC16.01■□□□□ 0.15
HMGB1P09429 ST5-261ENST00000626808 1071 ntTSL 5 BASIC16.01■□□□□ 0.15
HMGB1P09429 ZNF341-202ENST00000375200 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
HMGB1P09429 ZBTB49-201ENST00000337872 2889 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
HMGB1P09429 KLHL13-209ENST00000545703 3322 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
HMGB1P09429 TMPRSS12-202ENST00000551456 3336 ntTSL 2 BASIC16.01■□□□□ 0.15
HMGB1P09429 CLEC20A-202ENST00000623247 1491 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
HMGB1P09429 DAXX-203ENST00000414083 2355 ntTSL 2 BASIC16.01■□□□□ 0.15
HMGB1P09429 PTPN5-205ENST00000477854 2826 ntTSL 5 BASIC16.01■□□□□ 0.15
HMGB1P09429 C9orf47-203ENST00000375851 4837 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
HMGB1P09429 IFT81-202ENST00000361948 3048 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
HMGB1P09429 CERCAM-214ENST00000613052 1429 ntTSL 5 BASIC16.01■□□□□ 0.15
HMGB1P09429 CFAP65-204ENST00000410037 2703 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
HMGB1P09429 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
HMGB1P09429 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
HMGB1P09429 STK24-201ENST00000376547 2492 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
HMGB1P09429 MAD2L1-201ENST00000296509 5468 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
HMGB1P09429 YWHAQ-202ENST00000381844 2216 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
HMGB1P09429 FTO-214ENST00000636218 2227 ntTSL 5 BASIC16■□□□□ 0.15
HMGB1P09429 ASGR1-209ENST00000619926 1384 ntTSL 5 BASIC16■□□□□ 0.15
HMGB1P09429 AC022364.1-202ENST00000617468 2409 ntBASIC16■□□□□ 0.15
HMGB1P09429 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
HMGB1P09429 GOLGA8N-205ENST00000569659 1791 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
HMGB1P09429 MKL1-201ENST00000355630 4496 ntTSL 1 (best) BASIC16■□□□□ 0.15
HMGB1P09429 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC16■□□□□ 0.15
HMGB1P09429 PDK2-203ENST00000503176 3440 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
HMGB1P09429 KRT15-202ENST00000393974 3758 ntTSL 1 (best) BASIC16■□□□□ 0.15
HMGB1P09429 MAP7-201ENST00000354570 4152 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
HMGB1P09429 AC091807.1-201ENST00000418838 1544 ntBASIC16■□□□□ 0.15
HMGB1P09429 LUC7L2-208ENST00000541170 1525 ntTSL 2 BASIC16■□□□□ 0.15
HMGB1P09429 CNTNAP2-207ENST00000628930 1944 ntTSL 2 BASIC16■□□□□ 0.15
HMGB1P09429 MMP14-201ENST00000311852 3732 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
HMGB1P09429 ZFP36L2-201ENST00000282388 3696 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
HMGB1P09429 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
HMGB1P09429 IFT22-210ENST00000517481 1657 ntTSL 2 BASIC16■□□□□ 0.15
HMGB1P09429 OASL-202ENST00000339275 1492 ntTSL 1 (best) BASIC16■□□□□ 0.15
HMGB1P09429 CGB1-201ENST00000301407 573 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
HMGB1P09429 GON7-201ENST00000306954 1154 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
HMGB1P09429 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
HMGB1P09429 AC091046.1-201ENST00000331871 207 ntBASIC16■□□□□ 0.15
HMGB1P09429 ATP5C1-201ENST00000335698 1078 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
HMGB1P09429 AC092506.1-202ENST00000401022 528 ntBASIC16■□□□□ 0.15
HMGB1P09429 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
HMGB1P09429 AC005392.1-201ENST00000419624 500 ntTSL 5 BASIC16■□□□□ 0.15
HMGB1P09429 BX322557.2-201ENST00000445242 379 ntTSL 3 BASIC16■□□□□ 0.15
HMGB1P09429 MUTYH-231ENST00000488731 740 ntTSL 5 BASIC16■□□□□ 0.15
HMGB1P09429 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC16■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 60.7 ms