Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
CNOT4O95628 MYBPHL-201ENST00000357155 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CNOT4O95628 LINC02537-201ENST00000635943 1367 ntTSL 4 BASIC12.18□□□□□ -0.46
CNOT4O95628 SMC4-202ENST00000357388 5471 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CNOT4O95628 ZNF778-202ENST00000433976 3608 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
CNOT4O95628 INHBA-201ENST00000242208 6064 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CNOT4O95628 MPRIP-202ENST00000341712 3846 ntAPPRIS P3 TSL 5 BASIC12.18□□□□□ -0.46
CNOT4O95628 AL354707.1-201ENST00000615168 2013 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
CNOT4O95628 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
CNOT4O95628 NUMA1-205ENST00000393695 7343 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
CNOT4O95628 NKX2-1-AS1-201ENST00000521292 1775 ntTSL 2 BASIC12.18□□□□□ -0.46
CNOT4O95628 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
CNOT4O95628 HNRNPLL-209ENST00000449105 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CNOT4O95628 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CNOT4O95628 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CNOT4O95628 STK26-202ENST00000394334 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CNOT4O95628 NFATC1-204ENST00000397790 3453 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
CNOT4O95628 BDNF-208ENST00000418212 4125 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CNOT4O95628 PAAF1-201ENST00000310571 4994 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CNOT4O95628 LINC02486-201ENST00000604157 3000 ntBASIC12.18□□□□□ -0.46
CNOT4O95628 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
CNOT4O95628 STX16-NPEPL1-202ENST00000530122 3433 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
CNOT4O95628 EPPIN-201ENST00000336443 1217 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
CNOT4O95628 FAM213A-204ENST00000372188 829 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
CNOT4O95628 AC112721.1-201ENST00000409162 588 ntTSL 3 BASIC12.18□□□□□ -0.46
CNOT4O95628 CNRIP1-202ENST00000409559 644 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
CNOT4O95628 AL391839.2-201ENST00000412085 383 ntTSL 5 BASIC12.18□□□□□ -0.46
CNOT4O95628 IDS-203ENST00000428056 1213 ntTSL 2 BASIC12.18□□□□□ -0.46
CNOT4O95628 AL020996.1-201ENST00000442055 435 ntTSL 2 BASIC12.18□□□□□ -0.46
CNOT4O95628 STK24P1-201ENST00000455035 1291 ntBASIC12.18□□□□□ -0.46
CNOT4O95628 AREG-202ENST00000502307 956 ntTSL 5 BASIC12.18□□□□□ -0.46
CNOT4O95628 AP003390.1-201ENST00000533253 523 ntTSL 5 BASIC12.18□□□□□ -0.46
CNOT4O95628 EMP2-203ENST00000536829 781 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
CNOT4O95628 AL132994.1-201ENST00000554098 400 ntBASIC12.18□□□□□ -0.46
CNOT4O95628 AL022344.2-201ENST00000568976 968 ntBASIC12.18□□□□□ -0.46
CNOT4O95628 AC011481.2-201ENST00000585408 426 ntTSL 3 BASIC12.18□□□□□ -0.46
CNOT4O95628 AC005777.1-201ENST00000588332 187 ntBASIC12.18□□□□□ -0.46
CNOT4O95628 AP001269.2-201ENST00000590055 379 ntTSL 3 BASIC12.18□□□□□ -0.46
CNOT4O95628 FXYD3-204ENST00000603181 758 ntAPPRIS P1 TSL 3 BASIC12.18□□□□□ -0.46
CNOT4O95628 AC138466.5-201ENST00000624002 808 ntBASIC12.18□□□□□ -0.46
CNOT4O95628 GLUD1P2-203ENST00000631118 486 ntTSL 3 BASIC12.18□□□□□ -0.46
CNOT4O95628 LINC00431-202ENST00000636375 159 ntBASIC12.18□□□□□ -0.46
CNOT4O95628 AC079325.2-201ENST00000641710 606 ntAPPRIS P5 BASIC12.18□□□□□ -0.46
CNOT4O95628 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC12.18□□□□□ -0.46
CNOT4O95628 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CNOT4O95628 LAIR1-201ENST00000348231 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
CNOT4O95628 LINC00969-231ENST00000597482 1476 ntTSL 5 BASIC12.18□□□□□ -0.46
CNOT4O95628 CCNE2-201ENST00000308108 2724 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
CNOT4O95628 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
CNOT4O95628 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
CNOT4O95628 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
CNOT4O95628 ANO7-202ENST00000402430 2652 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
CNOT4O95628 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CNOT4O95628 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CNOT4O95628 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
CNOT4O95628 CARHSP1-217ENST00000611932 2833 ntAPPRIS P1 TSL 3 BASIC12.18□□□□□ -0.46
CNOT4O95628 CATSPERE-202ENST00000366533 3019 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
CNOT4O95628 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CNOT4O95628 TMEM248-201ENST00000341567 4229 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CNOT4O95628 FAM122B-203ENST00000370790 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
CNOT4O95628 WTIP-202ENST00000590071 13665 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CNOT4O95628 CHMP7-201ENST00000313219 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CNOT4O95628 MIR3936HG-204ENST00000621103 1793 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
CNOT4O95628 TMEM9-203ENST00000367333 1564 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
CNOT4O95628 AL358781.1-202ENST00000321081 1360 ntBASIC12.18□□□□□ -0.46
CNOT4O95628 ZC3H18-201ENST00000301011 3729 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
CNOT4O95628 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
CNOT4O95628 CETP-203ENST00000566128 1733 ntTSL 5 BASIC12.17□□□□□ -0.46
CNOT4O95628 PPP1R32-201ENST00000338608 1535 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CNOT4O95628 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC12.17□□□□□ -0.46
CNOT4O95628 TRPM2-203ENST00000397928 6221 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
CNOT4O95628 CACNA1C-231ENST00000616390 2833 ntTSL 2 BASIC12.17□□□□□ -0.46
CNOT4O95628 PSIP1-203ENST00000380733 3391 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CNOT4O95628 ZNF501-205ENST00000620116 3382 ntAPPRIS P1 TSL 4 BASIC12.17□□□□□ -0.46
CNOT4O95628 HMGCS2-201ENST00000369406 2428 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CNOT4O95628 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
CNOT4O95628 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC12.17□□□□□ -0.46
CNOT4O95628 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CNOT4O95628 PPT1-213ENST00000641319 2388 ntBASIC12.17□□□□□ -0.46
CNOT4O95628 HPGD-201ENST00000296521 1171 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CNOT4O95628 TMEM95-201ENST00000330767 1169 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
CNOT4O95628 MBD3L3-201ENST00000333843 775 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CNOT4O95628 OR7E115P-201ENST00000382617 1024 ntBASIC12.17□□□□□ -0.46
CNOT4O95628 INS-IGF2-202ENST00000397270 828 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CNOT4O95628 AL589935.1-203ENST00000412751 465 ntTSL 3 BASIC12.17□□□□□ -0.46
CNOT4O95628 Z97652.1-201ENST00000415176 329 ntTSL 5 BASIC12.17□□□□□ -0.46
CNOT4O95628 AL139008.1-201ENST00000437894 228 ntBASIC12.17□□□□□ -0.46
CNOT4O95628 GNG10P1-201ENST00000452289 199 ntBASIC12.17□□□□□ -0.46
CNOT4O95628 NAV2-AS2-201ENST00000533767 782 ntTSL 2 BASIC12.17□□□□□ -0.46
CNOT4O95628 AC226150.1-201ENST00000544259 466 ntBASIC12.17□□□□□ -0.46
CNOT4O95628 AL355916.2-201ENST00000556543 593 ntTSL 4 BASIC12.17□□□□□ -0.46
CNOT4O95628 NPTN-204ENST00000562924 1094 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CNOT4O95628 MIR5196-201ENST00000578146 115 ntBASIC12.17□□□□□ -0.46
CNOT4O95628 AC145207.8-201ENST00000580897 563 ntTSL 4 BASIC12.17□□□□□ -0.46
CNOT4O95628 AC005041.3-201ENST00000606287 649 ntBASIC12.17□□□□□ -0.46
CNOT4O95628 RPL13A-213ENST00000621674 1098 ntTSL 5 BASIC12.17□□□□□ -0.46
CNOT4O95628 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC12.17□□□□□ -0.46
CNOT4O95628 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CNOT4O95628 STOX2-201ENST00000308497 10458 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CNOT4O95628 FGD4-203ENST00000472289 1629 ntTSL 2 BASIC12.17□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms