Protein–RNA interactions for Protein: Q9Y3C5

RNF11, RING finger protein 11, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF11Q9Y3C5 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
RNF11Q9Y3C5 AC239859.2-201ENST00000444165 318 ntBASIC21.66■■□□□ 1.06
RNF11Q9Y3C5 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC21.66■■□□□ 1.06
RNF11Q9Y3C5 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
RNF11Q9Y3C5 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RNF11Q9Y3C5 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC21.66■■□□□ 1.06
RNF11Q9Y3C5 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
RNF11Q9Y3C5 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC21.65■■□□□ 1.06
RNF11Q9Y3C5 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
RNF11Q9Y3C5 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
RNF11Q9Y3C5 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
RNF11Q9Y3C5 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RNF11Q9Y3C5 AC009299.2-201ENST00000482477 511 ntBASIC21.65■■□□□ 1.06
RNF11Q9Y3C5 AL451085.2-201ENST00000605085 799 ntBASIC21.65■■□□□ 1.06
RNF11Q9Y3C5 MIR4787-201ENST00000607364 84 ntBASIC21.65■■□□□ 1.06
RNF11Q9Y3C5 COMT-203ENST00000403184 2217 ntTSL 2 BASIC21.65■■□□□ 1.06
RNF11Q9Y3C5 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
RNF11Q9Y3C5 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
RNF11Q9Y3C5 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RNF11Q9Y3C5 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
RNF11Q9Y3C5 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC21.64■■□□□ 1.06
RNF11Q9Y3C5 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC21.64■■□□□ 1.06
RNF11Q9Y3C5 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
RNF11Q9Y3C5 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
RNF11Q9Y3C5 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
RNF11Q9Y3C5 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC21.64■■□□□ 1.05
RNF11Q9Y3C5 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
RNF11Q9Y3C5 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RNF11Q9Y3C5 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
RNF11Q9Y3C5 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RNF11Q9Y3C5 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
RNF11Q9Y3C5 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC21.63■■□□□ 1.05
RNF11Q9Y3C5 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
RNF11Q9Y3C5 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
RNF11Q9Y3C5 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
RNF11Q9Y3C5 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
RNF11Q9Y3C5 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC21.63■■□□□ 1.05
RNF11Q9Y3C5 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RNF11Q9Y3C5 GCA-201ENST00000233612 1694 ntTSL 2 BASIC21.63■■□□□ 1.05
RNF11Q9Y3C5 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RNF11Q9Y3C5 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RNF11Q9Y3C5 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RNF11Q9Y3C5 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC21.62■■□□□ 1.05
RNF11Q9Y3C5 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC21.62■■□□□ 1.05
RNF11Q9Y3C5 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC21.62■■□□□ 1.05
RNF11Q9Y3C5 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
RNF11Q9Y3C5 AC144652.1-201ENST00000609974 1624 ntBASIC21.62■■□□□ 1.05
RNF11Q9Y3C5 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
RNF11Q9Y3C5 TERT-206ENST00000508104 2486 ntTSL 5 BASIC21.61■■□□□ 1.05
RNF11Q9Y3C5 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
RNF11Q9Y3C5 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
RNF11Q9Y3C5 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
RNF11Q9Y3C5 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC21.61■■□□□ 1.05
RNF11Q9Y3C5 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RNF11Q9Y3C5 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
RNF11Q9Y3C5 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RNF11Q9Y3C5 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC21.61■■□□□ 1.05
RNF11Q9Y3C5 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC21.61■■□□□ 1.05
RNF11Q9Y3C5 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
RNF11Q9Y3C5 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
RNF11Q9Y3C5 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
RNF11Q9Y3C5 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
RNF11Q9Y3C5 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC21.6■■□□□ 1.05
RNF11Q9Y3C5 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC21.6■■□□□ 1.05
RNF11Q9Y3C5 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RNF11Q9Y3C5 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
RNF11Q9Y3C5 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
RNF11Q9Y3C5 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
RNF11Q9Y3C5 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC21.6■■□□□ 1.05
RNF11Q9Y3C5 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RNF11Q9Y3C5 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC21.59■■□□□ 1.05
RNF11Q9Y3C5 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RNF11Q9Y3C5 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RNF11Q9Y3C5 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC21.59■■□□□ 1.05
RNF11Q9Y3C5 MTDHP2-201ENST00000601468 714 ntBASIC21.59■■□□□ 1.05
RNF11Q9Y3C5 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
RNF11Q9Y3C5 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RNF11Q9Y3C5 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
RNF11Q9Y3C5 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
RNF11Q9Y3C5 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC21.58■■□□□ 1.05
RNF11Q9Y3C5 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
RNF11Q9Y3C5 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
RNF11Q9Y3C5 HES6-204ENST00000409182 863 ntTSL 2 BASIC21.58■■□□□ 1.05
RNF11Q9Y3C5 TSPY9P-201ENST00000440215 945 ntBASIC21.58■■□□□ 1.05
RNF11Q9Y3C5 TSPY11P-201ENST00000442607 1045 ntBASIC21.58■■□□□ 1.05
RNF11Q9Y3C5 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC21.58■■□□□ 1.05
RNF11Q9Y3C5 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
RNF11Q9Y3C5 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.04
RNF11Q9Y3C5 LINC00526-201ENST00000581067 1875 ntBASIC21.58■■□□□ 1.04
RNF11Q9Y3C5 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC21.58■■□□□ 1.04
RNF11Q9Y3C5 AC007375.3-201ENST00000600936 2314 ntBASIC21.57■■□□□ 1.04
RNF11Q9Y3C5 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
RNF11Q9Y3C5 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC21.57■■□□□ 1.04
RNF11Q9Y3C5 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RNF11Q9Y3C5 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC21.57■■□□□ 1.04
RNF11Q9Y3C5 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RNF11Q9Y3C5 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RNF11Q9Y3C5 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RNF11Q9Y3C5 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RNF11Q9Y3C5 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC21.57■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms