Protein–RNA interactions for Protein: Q9Y2T2

AP3M1, AP-3 complex subunit mu-1, humanhuman

Predictions only

Length 418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3M1Q9Y2T2 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC20.97■□□□□ 0.95
AP3M1Q9Y2T2 U85056.1-201ENST00000616429 682 ntBASIC20.97■□□□□ 0.95
AP3M1Q9Y2T2 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
AP3M1Q9Y2T2 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC20.97■□□□□ 0.95
AP3M1Q9Y2T2 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
AP3M1Q9Y2T2 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
AP3M1Q9Y2T2 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
AP3M1Q9Y2T2 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
AP3M1Q9Y2T2 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC20.96■□□□□ 0.95
AP3M1Q9Y2T2 RARRES2P2-201ENST00000394842 485 ntBASIC20.96■□□□□ 0.95
AP3M1Q9Y2T2 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC20.96■□□□□ 0.95
AP3M1Q9Y2T2 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
AP3M1Q9Y2T2 AC144652.1-201ENST00000609974 1624 ntBASIC20.96■□□□□ 0.95
AP3M1Q9Y2T2 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
AP3M1Q9Y2T2 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20.96■□□□□ 0.95
AP3M1Q9Y2T2 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC20.95■□□□□ 0.95
AP3M1Q9Y2T2 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
AP3M1Q9Y2T2 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
AP3M1Q9Y2T2 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
AP3M1Q9Y2T2 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC20.95■□□□□ 0.94
AP3M1Q9Y2T2 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
AP3M1Q9Y2T2 MYB-221ENST00000527615 2381 ntTSL 5 BASIC20.95■□□□□ 0.94
AP3M1Q9Y2T2 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC20.95■□□□□ 0.94
AP3M1Q9Y2T2 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
AP3M1Q9Y2T2 MIR4281-201ENST00000580852 62 ntBASIC20.95■□□□□ 0.94
AP3M1Q9Y2T2 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
AP3M1Q9Y2T2 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
AP3M1Q9Y2T2 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC20.95■□□□□ 0.94
AP3M1Q9Y2T2 USF2-207ENST00000595068 1612 ntTSL 5 BASIC20.95■□□□□ 0.94
AP3M1Q9Y2T2 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
AP3M1Q9Y2T2 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
AP3M1Q9Y2T2 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
AP3M1Q9Y2T2 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
AP3M1Q9Y2T2 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC20.94■□□□□ 0.94
AP3M1Q9Y2T2 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC20.94■□□□□ 0.94
AP3M1Q9Y2T2 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
AP3M1Q9Y2T2 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
AP3M1Q9Y2T2 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
AP3M1Q9Y2T2 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
AP3M1Q9Y2T2 THA1P-201ENST00000590384 1145 ntBASIC20.94■□□□□ 0.94
AP3M1Q9Y2T2 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
AP3M1Q9Y2T2 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
AP3M1Q9Y2T2 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
AP3M1Q9Y2T2 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC20.94■□□□□ 0.94
AP3M1Q9Y2T2 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC20.94■□□□□ 0.94
AP3M1Q9Y2T2 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
AP3M1Q9Y2T2 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
AP3M1Q9Y2T2 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
AP3M1Q9Y2T2 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
AP3M1Q9Y2T2 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
AP3M1Q9Y2T2 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
AP3M1Q9Y2T2 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
AP3M1Q9Y2T2 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.93■□□□□ 0.94
AP3M1Q9Y2T2 KRT18P60-201ENST00000312876 1297 ntBASIC20.93■□□□□ 0.94
AP3M1Q9Y2T2 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
AP3M1Q9Y2T2 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
AP3M1Q9Y2T2 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
AP3M1Q9Y2T2 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC20.93■□□□□ 0.94
AP3M1Q9Y2T2 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
AP3M1Q9Y2T2 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC20.93■□□□□ 0.94
AP3M1Q9Y2T2 AC074183.2-201ENST00000623112 922 ntBASIC20.93■□□□□ 0.94
AP3M1Q9Y2T2 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC20.93■□□□□ 0.94
AP3M1Q9Y2T2 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC20.93■□□□□ 0.94
AP3M1Q9Y2T2 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
AP3M1Q9Y2T2 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
AP3M1Q9Y2T2 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC20.92■□□□□ 0.94
AP3M1Q9Y2T2 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
AP3M1Q9Y2T2 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
AP3M1Q9Y2T2 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
AP3M1Q9Y2T2 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
AP3M1Q9Y2T2 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.92■□□□□ 0.94
AP3M1Q9Y2T2 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
AP3M1Q9Y2T2 IDNK-201ENST00000376417 511 ntTSL 5 BASIC20.92■□□□□ 0.94
AP3M1Q9Y2T2 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
AP3M1Q9Y2T2 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC20.92■□□□□ 0.94
AP3M1Q9Y2T2 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC20.92■□□□□ 0.94
AP3M1Q9Y2T2 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
AP3M1Q9Y2T2 AC087742.1-201ENST00000575880 1738 ntBASIC20.92■□□□□ 0.94
AP3M1Q9Y2T2 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
AP3M1Q9Y2T2 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
AP3M1Q9Y2T2 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC20.91■□□□□ 0.94
AP3M1Q9Y2T2 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
AP3M1Q9Y2T2 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
AP3M1Q9Y2T2 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
AP3M1Q9Y2T2 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
AP3M1Q9Y2T2 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC20.91■□□□□ 0.94
AP3M1Q9Y2T2 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC20.91■□□□□ 0.94
AP3M1Q9Y2T2 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC20.91■□□□□ 0.94
AP3M1Q9Y2T2 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC20.91■□□□□ 0.94
AP3M1Q9Y2T2 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
AP3M1Q9Y2T2 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
AP3M1Q9Y2T2 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
AP3M1Q9Y2T2 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
AP3M1Q9Y2T2 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
AP3M1Q9Y2T2 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
AP3M1Q9Y2T2 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC20.9■□□□□ 0.94
AP3M1Q9Y2T2 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
AP3M1Q9Y2T2 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
AP3M1Q9Y2T2 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
AP3M1Q9Y2T2 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms