Protein–RNA interactions for Protein: Q9Y2I6

NINL, Ninein-like protein, humanhuman

Predictions only

Length 1,382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NINLQ9Y2I6 AK1-201ENST00000223836 736 ntTSL 3 BASIC30.63■■■□□ 2.49
NINLQ9Y2I6 JTB-203ENST00000368589 1216 ntTSL 2 BASIC30.63■■■□□ 2.49
NINLQ9Y2I6 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC30.63■■■□□ 2.49
NINLQ9Y2I6 AP005435.1-201ENST00000529293 1178 ntBASIC30.63■■■□□ 2.49
NINLQ9Y2I6 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
NINLQ9Y2I6 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
NINLQ9Y2I6 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC30.62■■■□□ 2.49
NINLQ9Y2I6 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC30.62■■■□□ 2.49
NINLQ9Y2I6 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
NINLQ9Y2I6 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC30.61■■■□□ 2.49
NINLQ9Y2I6 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
NINLQ9Y2I6 AC087623.3-201ENST00000607047 1098 ntBASIC30.61■■■□□ 2.49
NINLQ9Y2I6 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC30.61■■■□□ 2.49
NINLQ9Y2I6 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC30.6■■■□□ 2.49
NINLQ9Y2I6 STX4-202ENST00000394998 1498 ntTSL 2 BASIC30.6■■■□□ 2.49
NINLQ9Y2I6 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC30.6■■■□□ 2.49
NINLQ9Y2I6 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC30.6■■■□□ 2.49
NINLQ9Y2I6 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC30.6■■■□□ 2.49
NINLQ9Y2I6 MIR572-201ENST00000384983 95 ntBASIC30.6■■■□□ 2.49
NINLQ9Y2I6 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC30.6■■■□□ 2.49
NINLQ9Y2I6 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC30.6■■■□□ 2.49
NINLQ9Y2I6 PLD4-205ENST00000553861 667 ntTSL 2 BASIC30.6■■■□□ 2.49
NINLQ9Y2I6 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC30.6■■■□□ 2.49
NINLQ9Y2I6 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC30.6■■■□□ 2.49
NINLQ9Y2I6 ABCB10P4-201ENST00000566803 2184 ntBASIC30.6■■■□□ 2.49
NINLQ9Y2I6 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
NINLQ9Y2I6 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC30.59■■■□□ 2.49
NINLQ9Y2I6 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC30.59■■■□□ 2.49
NINLQ9Y2I6 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC30.59■■■□□ 2.49
NINLQ9Y2I6 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC30.59■■■□□ 2.49
NINLQ9Y2I6 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
NINLQ9Y2I6 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
NINLQ9Y2I6 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC30.58■■■□□ 2.49
NINLQ9Y2I6 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
NINLQ9Y2I6 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC30.58■■■□□ 2.49
NINLQ9Y2I6 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
NINLQ9Y2I6 AC027612.3-201ENST00000413684 1047 ntBASIC30.58■■■□□ 2.49
NINLQ9Y2I6 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
NINLQ9Y2I6 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
NINLQ9Y2I6 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC30.58■■■□□ 2.49
NINLQ9Y2I6 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
NINLQ9Y2I6 H19-210ENST00000439725 1929 ntTSL 2 BASIC30.58■■■□□ 2.49
NINLQ9Y2I6 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC30.58■■■□□ 2.49
NINLQ9Y2I6 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC30.58■■■□□ 2.49
NINLQ9Y2I6 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
NINLQ9Y2I6 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC30.57■■■□□ 2.48
NINLQ9Y2I6 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
NINLQ9Y2I6 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC30.57■■■□□ 2.48
NINLQ9Y2I6 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC30.57■■■□□ 2.48
NINLQ9Y2I6 AL358852.1-201ENST00000623174 1268 ntBASIC30.57■■■□□ 2.48
NINLQ9Y2I6 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
NINLQ9Y2I6 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC30.57■■■□□ 2.48
NINLQ9Y2I6 AC093323.1-202ENST00000635031 2045 ntBASIC30.56■■■□□ 2.48
NINLQ9Y2I6 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
NINLQ9Y2I6 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC30.56■■■□□ 2.48
NINLQ9Y2I6 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC30.56■■■□□ 2.48
NINLQ9Y2I6 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC30.56■■■□□ 2.48
NINLQ9Y2I6 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
NINLQ9Y2I6 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC30.56■■■□□ 2.48
NINLQ9Y2I6 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC30.55■■■□□ 2.48
NINLQ9Y2I6 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC30.55■■■□□ 2.48
NINLQ9Y2I6 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC30.55■■■□□ 2.48
NINLQ9Y2I6 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC30.55■■■□□ 2.48
NINLQ9Y2I6 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC30.55■■■□□ 2.48
NINLQ9Y2I6 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
NINLQ9Y2I6 YBX1P1-201ENST00000445822 960 ntBASIC30.54■■■□□ 2.48
NINLQ9Y2I6 AC012414.1-201ENST00000556676 535 ntBASIC30.54■■■□□ 2.48
NINLQ9Y2I6 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC30.54■■■□□ 2.48
NINLQ9Y2I6 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC30.54■■■□□ 2.48
NINLQ9Y2I6 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC30.54■■■□□ 2.48
NINLQ9Y2I6 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC30.54■■■□□ 2.48
NINLQ9Y2I6 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
NINLQ9Y2I6 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC30.54■■■□□ 2.48
NINLQ9Y2I6 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC30.54■■■□□ 2.48
NINLQ9Y2I6 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
NINLQ9Y2I6 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC30.54■■■□□ 2.48
NINLQ9Y2I6 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC30.54■■■□□ 2.48
NINLQ9Y2I6 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC30.54■■■□□ 2.48
NINLQ9Y2I6 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
NINLQ9Y2I6 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC30.54■■■□□ 2.48
NINLQ9Y2I6 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC30.54■■■□□ 2.48
NINLQ9Y2I6 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC30.54■■■□□ 2.48
NINLQ9Y2I6 SP2-202ENST00000613139 908 ntTSL 5 BASIC30.54■■■□□ 2.48
NINLQ9Y2I6 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
NINLQ9Y2I6 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC30.53■■■□□ 2.48
NINLQ9Y2I6 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
NINLQ9Y2I6 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC30.53■■■□□ 2.48
NINLQ9Y2I6 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC30.53■■■□□ 2.48
NINLQ9Y2I6 AL354811.1-201ENST00000610286 706 ntBASIC30.53■■■□□ 2.48
NINLQ9Y2I6 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC30.52■■■□□ 2.48
NINLQ9Y2I6 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
NINLQ9Y2I6 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC30.52■■■□□ 2.48
NINLQ9Y2I6 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC30.52■■■□□ 2.48
NINLQ9Y2I6 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC30.52■■■□□ 2.48
NINLQ9Y2I6 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC30.52■■■□□ 2.48
NINLQ9Y2I6 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.48
NINLQ9Y2I6 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC30.51■■■□□ 2.48
NINLQ9Y2I6 AL353803.4-201ENST00000565882 1934 ntBASIC30.51■■■□□ 2.47
NINLQ9Y2I6 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
NINLQ9Y2I6 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms