Protein–RNA interactions for Protein: Q9UMZ3

PTPRQ, Phosphatidylinositol phosphatase PTPRQ, humanhuman

Predictions only

Length 2,332 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRQQ9UMZ3 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PTPRQQ9UMZ3 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC20.7■□□□□ 0.9
PTPRQQ9UMZ3 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PTPRQQ9UMZ3 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PTPRQQ9UMZ3 SLC7A5P2-201ENST00000553010 536 ntBASIC20.7■□□□□ 0.9
PTPRQQ9UMZ3 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC20.7■□□□□ 0.9
PTPRQQ9UMZ3 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
PTPRQQ9UMZ3 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PTPRQQ9UMZ3 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC20.69■□□□□ 0.9
PTPRQQ9UMZ3 AL138781.1-201ENST00000566567 1274 ntBASIC20.69■□□□□ 0.9
PTPRQQ9UMZ3 AC011767.1-201ENST00000617410 1153 ntBASIC20.69■□□□□ 0.9
PTPRQQ9UMZ3 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PTPRQQ9UMZ3 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PTPRQQ9UMZ3 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
PTPRQQ9UMZ3 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PTPRQQ9UMZ3 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PTPRQQ9UMZ3 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PTPRQQ9UMZ3 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PTPRQQ9UMZ3 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PTPRQQ9UMZ3 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
PTPRQQ9UMZ3 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC20.69■□□□□ 0.9
PTPRQQ9UMZ3 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC20.69■□□□□ 0.9
PTPRQQ9UMZ3 TBCB-214ENST00000629269 413 ntTSL 5 BASIC20.69■□□□□ 0.9
PTPRQQ9UMZ3 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
PTPRQQ9UMZ3 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PTPRQQ9UMZ3 AC083906.2-201ENST00000511578 360 ntBASIC20.68■□□□□ 0.9
PTPRQQ9UMZ3 SPI1-203ENST00000533030 661 ntTSL 2 BASIC20.68■□□□□ 0.9
PTPRQQ9UMZ3 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PTPRQQ9UMZ3 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
PTPRQQ9UMZ3 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
PTPRQQ9UMZ3 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
PTPRQQ9UMZ3 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PTPRQQ9UMZ3 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PTPRQQ9UMZ3 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PTPRQQ9UMZ3 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
PTPRQQ9UMZ3 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC20.67■□□□□ 0.9
PTPRQQ9UMZ3 ARL16-209ENST00000573715 763 ntTSL 3 BASIC20.67■□□□□ 0.9
PTPRQQ9UMZ3 ARL16-211ENST00000576135 694 ntTSL 3 BASIC20.67■□□□□ 0.9
PTPRQQ9UMZ3 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC20.67■□□□□ 0.9
PTPRQQ9UMZ3 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
PTPRQQ9UMZ3 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PTPRQQ9UMZ3 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
PTPRQQ9UMZ3 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PTPRQQ9UMZ3 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PTPRQQ9UMZ3 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PTPRQQ9UMZ3 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
PTPRQQ9UMZ3 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PTPRQQ9UMZ3 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC20.67■□□□□ 0.9
PTPRQQ9UMZ3 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PTPRQQ9UMZ3 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC20.67■□□□□ 0.9
PTPRQQ9UMZ3 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
PTPRQQ9UMZ3 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PTPRQQ9UMZ3 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
PTPRQQ9UMZ3 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC20.66■□□□□ 0.9
PTPRQQ9UMZ3 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC20.66■□□□□ 0.9
PTPRQQ9UMZ3 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC20.66■□□□□ 0.9
PTPRQQ9UMZ3 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC20.66■□□□□ 0.9
PTPRQQ9UMZ3 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
PTPRQQ9UMZ3 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC20.66■□□□□ 0.9
PTPRQQ9UMZ3 EI24-204ENST00000527235 1625 ntTSL 5 BASIC20.66■□□□□ 0.9
PTPRQQ9UMZ3 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC20.66■□□□□ 0.9
PTPRQQ9UMZ3 RARA-203ENST00000394086 2008 ntTSL 2 BASIC20.66■□□□□ 0.9
PTPRQQ9UMZ3 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PTPRQQ9UMZ3 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
PTPRQQ9UMZ3 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
PTPRQQ9UMZ3 OAS3-207ENST00000551007 998 ntTSL 2 BASIC20.66■□□□□ 0.9
PTPRQQ9UMZ3 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC20.66■□□□□ 0.9
PTPRQQ9UMZ3 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PTPRQQ9UMZ3 BX005040.4-201ENST00000637145 1518 ntBASIC20.65■□□□□ 0.9
PTPRQQ9UMZ3 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
PTPRQQ9UMZ3 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC20.65■□□□□ 0.9
PTPRQQ9UMZ3 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
PTPRQQ9UMZ3 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PTPRQQ9UMZ3 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC20.65■□□□□ 0.9
PTPRQQ9UMZ3 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC20.65■□□□□ 0.9
PTPRQQ9UMZ3 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC20.65■□□□□ 0.9
PTPRQQ9UMZ3 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC20.65■□□□□ 0.9
PTPRQQ9UMZ3 PRORSD1P-201ENST00000295112 541 ntBASIC20.65■□□□□ 0.9
PTPRQQ9UMZ3 SLC29A4P1-201ENST00000398760 971 ntBASIC20.65■□□□□ 0.9
PTPRQQ9UMZ3 TSPY6P-201ENST00000448518 926 ntBASIC20.65■□□□□ 0.9
PTPRQQ9UMZ3 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PTPRQQ9UMZ3 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC20.65■□□□□ 0.9
PTPRQQ9UMZ3 AC098934.4-201ENST00000564127 592 ntBASIC20.65■□□□□ 0.9
PTPRQQ9UMZ3 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC20.65■□□□□ 0.9
PTPRQQ9UMZ3 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PTPRQQ9UMZ3 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
PTPRQQ9UMZ3 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC20.64■□□□□ 0.89
PTPRQQ9UMZ3 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC20.64■□□□□ 0.89
PTPRQQ9UMZ3 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PTPRQQ9UMZ3 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
PTPRQQ9UMZ3 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PTPRQQ9UMZ3 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PTPRQQ9UMZ3 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
PTPRQQ9UMZ3 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
PTPRQQ9UMZ3 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC20.64■□□□□ 0.89
PTPRQQ9UMZ3 DUX4L16-201ENST00000555130 1264 ntBASIC20.64■□□□□ 0.89
PTPRQQ9UMZ3 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PTPRQQ9UMZ3 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC20.63■□□□□ 0.89
PTPRQQ9UMZ3 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PTPRQQ9UMZ3 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms