Protein–RNA interactions for Protein: Q9UHC7

MKRN1, E3 ubiquitin-protein ligase makorin-1, humanhuman

Known RBP Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKRN1Q9UHC7 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC27.11■■□□□ 1.93
MKRN1Q9UHC7 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC27.11■■□□□ 1.93
MKRN1Q9UHC7 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
MKRN1Q9UHC7 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC27.11■■□□□ 1.93
MKRN1Q9UHC7 C17orf82-201ENST00000623772 1530 ntBASIC27.11■■□□□ 1.93
MKRN1Q9UHC7 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
MKRN1Q9UHC7 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC27.1■■□□□ 1.93
MKRN1Q9UHC7 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
MKRN1Q9UHC7 AC241377.3-202ENST00000626088 1088 ntBASIC27.1■■□□□ 1.93
MKRN1Q9UHC7 AC241585.3-202ENST00000628937 1088 ntBASIC27.1■■□□□ 1.93
MKRN1Q9UHC7 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC27.1■■□□□ 1.93
MKRN1Q9UHC7 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
MKRN1Q9UHC7 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC27.1■■□□□ 1.93
MKRN1Q9UHC7 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
MKRN1Q9UHC7 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC27.09■■□□□ 1.93
MKRN1Q9UHC7 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
MKRN1Q9UHC7 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC27.09■■□□□ 1.93
MKRN1Q9UHC7 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC27.09■■□□□ 1.93
MKRN1Q9UHC7 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC27.09■■□□□ 1.93
MKRN1Q9UHC7 AC006015.1-201ENST00000429970 570 ntBASIC27.09■■□□□ 1.93
MKRN1Q9UHC7 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC27.09■■□□□ 1.93
MKRN1Q9UHC7 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC27.09■■□□□ 1.93
MKRN1Q9UHC7 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
MKRN1Q9UHC7 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC27.08■■□□□ 1.93
MKRN1Q9UHC7 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC27.08■■□□□ 1.93
MKRN1Q9UHC7 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC27.08■■□□□ 1.93
MKRN1Q9UHC7 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC27.08■■□□□ 1.93
MKRN1Q9UHC7 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC27.08■■□□□ 1.93
MKRN1Q9UHC7 AC006970.2-201ENST00000450065 779 ntBASIC27.08■■□□□ 1.93
MKRN1Q9UHC7 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC27.08■■□□□ 1.93
MKRN1Q9UHC7 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
MKRN1Q9UHC7 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC27.08■■□□□ 1.92
MKRN1Q9UHC7 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC27.07■■□□□ 1.92
MKRN1Q9UHC7 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC27.07■■□□□ 1.92
MKRN1Q9UHC7 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC27.07■■□□□ 1.92
MKRN1Q9UHC7 AL354811.1-201ENST00000610286 706 ntBASIC27.07■■□□□ 1.92
MKRN1Q9UHC7 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC27.07■■□□□ 1.92
MKRN1Q9UHC7 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
MKRN1Q9UHC7 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
MKRN1Q9UHC7 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
MKRN1Q9UHC7 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC27.06■■□□□ 1.92
MKRN1Q9UHC7 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC27.06■■□□□ 1.92
MKRN1Q9UHC7 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
MKRN1Q9UHC7 AC016769.1-201ENST00000409132 1010 ntBASIC27.06■■□□□ 1.92
MKRN1Q9UHC7 AC093827.2-201ENST00000512654 315 ntBASIC27.06■■□□□ 1.92
MKRN1Q9UHC7 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
MKRN1Q9UHC7 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
MKRN1Q9UHC7 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC27.06■■□□□ 1.92
MKRN1Q9UHC7 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC27.05■■□□□ 1.92
MKRN1Q9UHC7 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC27.05■■□□□ 1.92
MKRN1Q9UHC7 MIR572-201ENST00000384983 95 ntBASIC27.05■■□□□ 1.92
MKRN1Q9UHC7 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
MKRN1Q9UHC7 AICDA-202ENST00000537228 667 ntTSL 5 BASIC27.05■■□□□ 1.92
MKRN1Q9UHC7 ARL16-209ENST00000573715 763 ntTSL 3 BASIC27.05■■□□□ 1.92
MKRN1Q9UHC7 ARL16-211ENST00000576135 694 ntTSL 3 BASIC27.05■■□□□ 1.92
MKRN1Q9UHC7 AL499627.2-201ENST00000606283 725 ntBASIC27.05■■□□□ 1.92
MKRN1Q9UHC7 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
MKRN1Q9UHC7 LINC02228-203ENST00000641970 1355 ntBASIC27.05■■□□□ 1.92
MKRN1Q9UHC7 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC27.05■■□□□ 1.92
MKRN1Q9UHC7 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC27.05■■□□□ 1.92
MKRN1Q9UHC7 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC27.05■■□□□ 1.92
MKRN1Q9UHC7 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC27.05■■□□□ 1.92
MKRN1Q9UHC7 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC27.04■■□□□ 1.92
MKRN1Q9UHC7 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC27.04■■□□□ 1.92
MKRN1Q9UHC7 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
MKRN1Q9UHC7 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC27.04■■□□□ 1.92
MKRN1Q9UHC7 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC27.04■■□□□ 1.92
MKRN1Q9UHC7 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC27.04■■□□□ 1.92
MKRN1Q9UHC7 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC27.04■■□□□ 1.92
MKRN1Q9UHC7 EI24-213ENST00000618552 1747 ntTSL 5 BASIC27.04■■□□□ 1.92
MKRN1Q9UHC7 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC27.03■■□□□ 1.92
MKRN1Q9UHC7 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC27.03■■□□□ 1.92
MKRN1Q9UHC7 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC27.03■■□□□ 1.92
MKRN1Q9UHC7 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC27.03■■□□□ 1.92
MKRN1Q9UHC7 AC009086.3-201ENST00000623486 1008 ntBASIC27.03■■□□□ 1.92
MKRN1Q9UHC7 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
MKRN1Q9UHC7 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC27.02■■□□□ 1.92
MKRN1Q9UHC7 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
MKRN1Q9UHC7 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC27.02■■□□□ 1.92
MKRN1Q9UHC7 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
MKRN1Q9UHC7 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
MKRN1Q9UHC7 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC27.02■■□□□ 1.92
MKRN1Q9UHC7 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC27.02■■□□□ 1.92
MKRN1Q9UHC7 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC27.02■■□□□ 1.92
MKRN1Q9UHC7 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC27.02■■□□□ 1.92
MKRN1Q9UHC7 DET1-205ENST00000558413 583 ntTSL 4 BASIC27.02■■□□□ 1.92
MKRN1Q9UHC7 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC27.02■■□□□ 1.92
MKRN1Q9UHC7 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC27.02■■□□□ 1.92
MKRN1Q9UHC7 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC27.02■■□□□ 1.92
MKRN1Q9UHC7 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
MKRN1Q9UHC7 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC27.01■■□□□ 1.91
MKRN1Q9UHC7 CROCCP5-201ENST00000436658 830 ntBASIC27.01■■□□□ 1.91
MKRN1Q9UHC7 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC27.01■■□□□ 1.91
MKRN1Q9UHC7 AC137761.2-201ENST00000561729 223 ntBASIC27.01■■□□□ 1.91
MKRN1Q9UHC7 AC145350.3-201ENST00000569033 163 ntBASIC27.01■■□□□ 1.91
MKRN1Q9UHC7 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC27.01■■□□□ 1.91
MKRN1Q9UHC7 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC27.01■■□□□ 1.91
MKRN1Q9UHC7 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
MKRN1Q9UHC7 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
MKRN1Q9UHC7 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC27■■□□□ 1.91
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms