Protein–RNA interactions for Protein: Q9P1Y6

PHRF1, PHD and RING finger domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 1,649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1Q9P1Y6 CDCA4P2-201ENST00000441182 718 ntBASIC30.22■■■□□ 2.43
PHRF1Q9P1Y6 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC30.22■■■□□ 2.43
PHRF1Q9P1Y6 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC30.22■■■□□ 2.43
PHRF1Q9P1Y6 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC30.22■■■□□ 2.43
PHRF1Q9P1Y6 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC30.22■■■□□ 2.43
PHRF1Q9P1Y6 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC30.22■■■□□ 2.43
PHRF1Q9P1Y6 ABHD17AP1-201ENST00000358206 933 ntBASIC30.22■■■□□ 2.43
PHRF1Q9P1Y6 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
PHRF1Q9P1Y6 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC30.22■■■□□ 2.43
PHRF1Q9P1Y6 MFF-208ENST00000409616 1247 ntTSL 5 BASIC30.22■■■□□ 2.43
PHRF1Q9P1Y6 AC080038.1-201ENST00000611274 1154 ntBASIC30.22■■■□□ 2.43
PHRF1Q9P1Y6 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
PHRF1Q9P1Y6 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC30.21■■■□□ 2.43
PHRF1Q9P1Y6 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC30.21■■■□□ 2.43
PHRF1Q9P1Y6 SHF-207ENST00000560540 2062 ntTSL 5 BASIC30.21■■■□□ 2.43
PHRF1Q9P1Y6 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC30.21■■■□□ 2.43
PHRF1Q9P1Y6 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC30.21■■■□□ 2.43
PHRF1Q9P1Y6 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC30.21■■■□□ 2.43
PHRF1Q9P1Y6 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC30.21■■■□□ 2.43
PHRF1Q9P1Y6 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
PHRF1Q9P1Y6 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC30.2■■■□□ 2.43
PHRF1Q9P1Y6 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC30.2■■■□□ 2.42
PHRF1Q9P1Y6 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC30.2■■■□□ 2.42
PHRF1Q9P1Y6 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC30.2■■■□□ 2.42
PHRF1Q9P1Y6 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
PHRF1Q9P1Y6 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
PHRF1Q9P1Y6 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC30.19■■■□□ 2.42
PHRF1Q9P1Y6 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC30.19■■■□□ 2.42
PHRF1Q9P1Y6 DUX4L4-201ENST00000566884 1269 ntBASIC30.19■■■□□ 2.42
PHRF1Q9P1Y6 GXYLT1P5-201ENST00000614548 1189 ntBASIC30.19■■■□□ 2.42
PHRF1Q9P1Y6 WWOX-218ENST00000627394 894 ntTSL 5 BASIC30.19■■■□□ 2.42
PHRF1Q9P1Y6 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC30.19■■■□□ 2.42
PHRF1Q9P1Y6 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
PHRF1Q9P1Y6 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC30.19■■■□□ 2.42
PHRF1Q9P1Y6 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
PHRF1Q9P1Y6 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC30.18■■■□□ 2.42
PHRF1Q9P1Y6 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
PHRF1Q9P1Y6 HSCB-202ENST00000398941 955 ntTSL 2 BASIC30.18■■■□□ 2.42
PHRF1Q9P1Y6 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC30.18■■■□□ 2.42
PHRF1Q9P1Y6 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
PHRF1Q9P1Y6 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC30.18■■■□□ 2.42
PHRF1Q9P1Y6 GALNS-213ENST00000569433 723 ntTSL 3 BASIC30.18■■■□□ 2.42
PHRF1Q9P1Y6 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC30.18■■■□□ 2.42
PHRF1Q9P1Y6 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
PHRF1Q9P1Y6 STX7-201ENST00000367937 1090 ntTSL 5 BASIC30.18■■■□□ 2.42
PHRF1Q9P1Y6 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC30.18■■■□□ 2.42
PHRF1Q9P1Y6 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC30.18■■■□□ 2.42
PHRF1Q9P1Y6 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC30.18■■■□□ 2.42
PHRF1Q9P1Y6 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC30.18■■■□□ 2.42
PHRF1Q9P1Y6 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
PHRF1Q9P1Y6 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
PHRF1Q9P1Y6 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC30.17■■■□□ 2.42
PHRF1Q9P1Y6 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC30.17■■■□□ 2.42
PHRF1Q9P1Y6 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
PHRF1Q9P1Y6 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC30.17■■■□□ 2.42
PHRF1Q9P1Y6 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC30.16■■■□□ 2.42
PHRF1Q9P1Y6 MIR663A-201ENST00000385250 93 ntBASIC30.16■■■□□ 2.42
PHRF1Q9P1Y6 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
PHRF1Q9P1Y6 AC022211.4-201ENST00000625094 2161 ntBASIC30.16■■■□□ 2.42
PHRF1Q9P1Y6 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
PHRF1Q9P1Y6 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
PHRF1Q9P1Y6 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
PHRF1Q9P1Y6 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC30.15■■■□□ 2.42
PHRF1Q9P1Y6 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC30.15■■■□□ 2.42
PHRF1Q9P1Y6 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC30.15■■■□□ 2.42
PHRF1Q9P1Y6 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
PHRF1Q9P1Y6 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC30.15■■■□□ 2.42
PHRF1Q9P1Y6 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC30.15■■■□□ 2.42
PHRF1Q9P1Y6 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC30.15■■■□□ 2.42
PHRF1Q9P1Y6 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
PHRF1Q9P1Y6 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
PHRF1Q9P1Y6 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC30.14■■■□□ 2.42
PHRF1Q9P1Y6 GAS2L1P2-201ENST00000436355 1356 ntBASIC30.14■■■□□ 2.42
PHRF1Q9P1Y6 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
PHRF1Q9P1Y6 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
PHRF1Q9P1Y6 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC30.14■■■□□ 2.42
PHRF1Q9P1Y6 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.41
PHRF1Q9P1Y6 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC30.14■■■□□ 2.41
PHRF1Q9P1Y6 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC30.14■■■□□ 2.41
PHRF1Q9P1Y6 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.41
PHRF1Q9P1Y6 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC30.14■■■□□ 2.41
PHRF1Q9P1Y6 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC30.13■■■□□ 2.41
PHRF1Q9P1Y6 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
PHRF1Q9P1Y6 AC004854.2-201ENST00000608450 1441 ntBASIC30.13■■■□□ 2.41
PHRF1Q9P1Y6 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
PHRF1Q9P1Y6 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
PHRF1Q9P1Y6 AC026185.1-201ENST00000445748 174 ntBASIC30.13■■■□□ 2.41
PHRF1Q9P1Y6 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC30.13■■■□□ 2.41
PHRF1Q9P1Y6 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
PHRF1Q9P1Y6 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC30.13■■■□□ 2.41
PHRF1Q9P1Y6 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC30.12■■■□□ 2.41
PHRF1Q9P1Y6 EI24-213ENST00000618552 1747 ntTSL 5 BASIC30.12■■■□□ 2.41
PHRF1Q9P1Y6 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC30.12■■■□□ 2.41
PHRF1Q9P1Y6 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC30.12■■■□□ 2.41
PHRF1Q9P1Y6 AC144652.1-201ENST00000609974 1624 ntBASIC30.12■■■□□ 2.41
PHRF1Q9P1Y6 CROCCP5-201ENST00000436658 830 ntBASIC30.11■■■□□ 2.41
PHRF1Q9P1Y6 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC30.11■■■□□ 2.41
PHRF1Q9P1Y6 FP325331.1-202ENST00000623531 1380 ntBASIC30.11■■■□□ 2.41
PHRF1Q9P1Y6 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
PHRF1Q9P1Y6 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC30.11■■■□□ 2.41
Retrieved 100 of 98,524 protein–RNA pairs in 13.2 ms